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4,366 Data sources

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  • The Trace Archives includes the following archives: The Sequence Read Archive (SRA) stores raw sequence data from "next-generation" sequencing technologies including 454, IonTorrent, Illumina, SOLiD, Helicos and Complete Genomics. In addition to raw sequence data, SRA now stores alignment information in the form of read placements on a reference sequence. The Trace Archive serves as the repository of sequencing data from gel/capillary platforms such as Applied Biosystems ABI 3730®. The Trace Assembly Archive stores pairwise alignment and multiple alignment of sequencing reads, linking basic trace data with finished genomic sequence as found in GenBank.

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  • Gene Signature DataBase (GeneSigDB) is a database of gene signatures (or gene sets) that have been extracted and manually curated from articles that are indexed by PubMed.

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  • DNASU is a central repository for plasmid clones and collections. Currently we store and distribute over 197,000 plasmids including 75,000 human and mouse plasmids, full genome collections, the protein expression plasmids from the Protein Structure Initiative as the PSI: Biology Material Repository (PSI : Biology-MR), and both small and large collections from individual researchers. We are also a founding member and distributor of the ORFeome Collaboration plasmid collection.

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  • The Hymenoptera Genome Database (HGD) is a genome informatics resource that supports the research of insects of the order Hymenoptera (e.g. bees, wasps, ants). HGD is divided into three main divisions: BeeBase, which hosts bee genomes and the Bee Pests and Pathogens resource; NasoniaBase, which hosts the genome of the Jewel wasp (Nasonia vitripennis); and the Ant Genomes Portal, which hosts the genomes of several ant species.

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4,366 Data sources
  • more_vert
  • The Trace Archives includes the following archives: The Sequence Read Archive (SRA) stores raw sequence data from "next-generation" sequencing technologies including 454, IonTorrent, Illumina, SOLiD, Helicos and Complete Genomics. In addition to raw sequence data, SRA now stores alignment information in the form of read placements on a reference sequence. The Trace Archive serves as the repository of sequencing data from gel/capillary platforms such as Applied Biosystems ABI 3730®. The Trace Assembly Archive stores pairwise alignment and multiple alignment of sequencing reads, linking basic trace data with finished genomic sequence as found in GenBank.

    more_vert
  • more_vert
  • Gene Signature DataBase (GeneSigDB) is a database of gene signatures (or gene sets) that have been extracted and manually curated from articles that are indexed by PubMed.

    more_vert
  • more_vert
  • DNASU is a central repository for plasmid clones and collections. Currently we store and distribute over 197,000 plasmids including 75,000 human and mouse plasmids, full genome collections, the protein expression plasmids from the Protein Structure Initiative as the PSI: Biology Material Repository (PSI : Biology-MR), and both small and large collections from individual researchers. We are also a founding member and distributor of the ORFeome Collaboration plasmid collection.

    more_vert
  • more_vert
  • The Hymenoptera Genome Database (HGD) is a genome informatics resource that supports the research of insects of the order Hymenoptera (e.g. bees, wasps, ants). HGD is divided into three main divisions: BeeBase, which hosts bee genomes and the Bee Pests and Pathogens resource; NasoniaBase, which hosts the genome of the Jewel wasp (Nasonia vitripennis); and the Ant Genomes Portal, which hosts the genomes of several ant species.

    more_vert
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