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This site is a university repository providing open access to the publication output of the Institution.

Alternative cleavage and polyadenylation (APA) of RNAs gives rise to isoforms with different terminal exons, which in turn determine the fate of the RNA and the encoded protein. APA has thus been implicated in the regulation of cell proliferation, differentiation and disease development. PolyASite is a portal to the curated set of poly(A) sites inferred from publicly available 3’ end sequencing datasets. It allows efficient finding, exploration and export of poly(A) sites in several organisms. In constructing our poly(A) site atlas, we applied uniform quality measures, including the flagging of putative internal priming sites, to input datasets originating from different 3’ end sequencing techniques, cell types or tissues. Through integrated processing of all data, we identified and clustered sites that are closely spaced and share polyadenylation signals, as these are likely the result of stochastic variations in processing. For each cluster, we identified the representative - most frequently processed - site and estimated the relative use in the transcriptome across all samples. While other existing alternative polyadenylation databases rely on a single experimental method, or on poly(A) site estimation from RNA-seq data, PolyASite is built on data from several 3’ end sequencing techniques. This allows a broader coverage of cell types and poly(A) sites to support further genomics studies.

This repository hosts the research output of the institution. The interface is available in Basque, English and Spanish.

FCP is a publicly accessible web tool dedicated to analysing the current state and trends on the population of available structures along the classification schemes of enzymes and nuclear receptors, offering both graphical and quantitative data on the degree of functional coverage in that portion of the proteome by existing structures, as well as on the bias observed in the distribution of those structures among proteins.

This site provides access to datasets from the public universities in the Autonomous Region of Madrid and the UNED, members of Consorcio Madroño. The interface is available in Spanish or English.

This is the institutional repository of Universitat Rovira i Virgili. The interface is available in Spanish, Catalan and English.

This site is a Swiss digital library dedicated to providing free online access to rare antique Swiss books and prints.The interface is available in German, English, French or Italian but most of the antique books are in German only. Users can set up RSS feeds to be alerted to new uploads.

This site provides access to the research outputs and collections of the institution. Users may set up RSS feeds to be alerted to new content. The interface is available in Spanish and English.

The Green Non-Coding Database (GreeNC) is a repository of lncRNAs annotated in plants and algae. By using the same pipeline to annotate lncRNAs and organizing them in a central database we aim to provide a tool for the scientific community that can boost the research on this class of transcripts. The GreeNC database provides information about sequence, genomic coordinates, coding potential and folding energy for all the identified lncRNAs. In the last update, 16 species have been updated and 78 species have been added, resulting in the annotation of more than 495 000 lncRNAs.