- GB
- US
- AT
- BY
- Thematic: No
- GB
- US
- AT
- BY
- Thematic: No
- Institutional Repository United Kingdom Compatibility:OpenAIRE 4.0 (inst.&thematic. repo.)Partners:Middlesex University MultidisciplinaryMiddlesex University
re3data: r3d100012417 , r3d100012417
OAI-PMH URL: https://discovery-pp.ucl.ac.uk/cgi/oai2University repository providing access to the publication output of the institution. Not all items listed are available as full text, and many are bibliographic entries only or link to external service providers (e.g. e-journal sites) which may or may not be available to external users, depending upon local or personal subscriptions. Users may set up RSS and ATOM feeds to be alerted to new content.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:Department of Genetics, Stanford University, USA, Genomics Institute, University of California, Santa Cruz, CA, USA, Department of Genetics, Stanford University, USA Functional Genomics, Epigenetics, Nucleic acid sequenceDepartment of Genetics, Stanford University, USA,Genomics Institute, University of California, Santa Cruz, CA, USA,Department of Genetics, Stanford University, USA
The ENCODE (Encyclopedia of DNA Elements) Consortium is an international collaboration of research groups funded by the National Human Genome Research Institute (NHGRI). The goal of ENCODE is to build a comprehensive parts list of functional elements in the human genome including elements that act at the protein and RNA levels, and regulatory elements that control cells and circumstances in which a gene is active. ENCODE investigators employ a variety of assays and methods to identify functional elements. The discovery and annotation of gene elements is accomplished primarily by sequencing a diverse range of RNA sources, comparative genomics, integrative bioinformatic methods, and human curation. Regulatory elements are typically investigated through DNA hypersensitivity assays, assays of DNA methylation, and immunoprecipitation (IP) of proteins that interact with DNA and RNA, i.e., modified histones, transcription factors, chromatin regulators, and RNA-binding proteins, followed by sequencing.
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re3data: r3d100010887
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For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:Human Immunology Project Consortium, Human Immunology Project Consortium Immunology, Virology, Cell BiologyHuman Immunology Project Consortium,Human Immunology Project Consortium
The Human Immunology Project Consortium (HIPC) Dashboard is a web-application supporting the storage and dissemination of immune signatures curated from published literature. Using computational analysis of large-scale experimental data from high-throughput systems biology approaches coupled with detailed clinical phenotyping in well-characterized human cohorts, the HIPC aims to identify molecular “signatures” that correlate with the outcomes of vaccinations, adjuvants or natural infections in humans. To facilitate dissemination of this information to the scientific community the Consortium has developed the “HIPC Dashboard”, a web interface that provides access to consistently annotated immune signatures generated by HIPC activities as well as curated from the literature.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States, United Kingdom Compatibility:Not yet registeredPartners:NCHGR, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire, UK, NCHGR Genomics, Comparative Genomics, Single nucleotide polymorphismNCHGR,European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire, UK,NCHGR
re3data: r3d100014209
The Genome-Wide Association Studies (GWAS) Catalog provides a consistent, searchable, visualisable and freely available database of published SNP-trait associations, which can be easily integrated with other resources, and is accessed by scientists, clinicians and other users worldwide. Within the Catalog, all eligible GWA studies are identified by literature search and assessed by curators, who then extract the reported trait, significant SNP-trait associations, and sample metadata. The Catalog also publishes a GWAS diagram of SNP-trait associations, mapped onto the human genome by chromosomal location and displayed on the human karyotype. Since 2010, delivery and development of the Catalog has been a collaborative project between the EMBL-EBI and NHGRI. Since 2108 we have accepted statistics files for eligible publications, these can be submitted prior to publication. https://www.ebi.ac.uk/gwas/deposition
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For further information contact us at helpdesk@openaire.eu - Data Repository Germany, United States Compatibility:OpenAIRE 3.0 (OA, funding)Partners:BMBF, TEI, Georg-August-Universität Göttingen, Niedersächsische Staats- und Universitätsbibliothek, Humanities Data Center Partner, Georg-August-Universität Göttingen, Niedersächsische Staats- und Universitätsbibliothek +3 partners Humanities and Social Sciences, Linguistics, Literary StudiesBMBF,TEI,Georg-August-Universität Göttingen, Niedersächsische Staats- und Universitätsbibliothek,Humanities Data Center Partner,Georg-August-Universität Göttingen, Niedersächsische Staats- und Universitätsbibliothek,TEI,BMBF,Humanities Data Center PartnerOAI-PMH URL: https://textgridlab.org/1.0/tgoaipmh/oai
The TextGrid Repository offers an extensive searchable and adaptable corpus of XML/TEI encoded texts and images. Amongst the continuously growing corpus is the Digital Library of TextGrid, which consists of works of more than 600 authors of German fiction (prose, verse and drama), as well as nonfiction from the beginning of the printing press to the early 20th century.
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- Institutional Repository United Kingdom Compatibility:OpenAIRE 4.0 (inst.&thematic. repo.)Partners:Middlesex University MultidisciplinaryMiddlesex University
re3data: r3d100012417 , r3d100012417
OAI-PMH URL: https://discovery-pp.ucl.ac.uk/cgi/oai2University repository providing access to the publication output of the institution. Not all items listed are available as full text, and many are bibliographic entries only or link to external service providers (e.g. e-journal sites) which may or may not be available to external users, depending upon local or personal subscriptions. Users may set up RSS and ATOM feeds to be alerted to new content.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:Department of Genetics, Stanford University, USA, Genomics Institute, University of California, Santa Cruz, CA, USA, Department of Genetics, Stanford University, USA Functional Genomics, Epigenetics, Nucleic acid sequenceDepartment of Genetics, Stanford University, USA,Genomics Institute, University of California, Santa Cruz, CA, USA,Department of Genetics, Stanford University, USA
The ENCODE (Encyclopedia of DNA Elements) Consortium is an international collaboration of research groups funded by the National Human Genome Research Institute (NHGRI). The goal of ENCODE is to build a comprehensive parts list of functional elements in the human genome including elements that act at the protein and RNA levels, and regulatory elements that control cells and circumstances in which a gene is active. ENCODE investigators employ a variety of assays and methods to identify functional elements. The discovery and annotation of gene elements is accomplished primarily by sequencing a diverse range of RNA sources, comparative genomics, integrative bioinformatic methods, and human curation. Regulatory elements are typically investigated through DNA hypersensitivity assays, assays of DNA methylation, and immunoprecipitation (IP) of proteins that interact with DNA and RNA, i.e., modified histones, transcription factors, chromatin regulators, and RNA-binding proteins, followed by sequencing.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States, Netherlands, European Union Compatibility:collected from a compatible aggregatorPartners:NIDCD, CLARIN, ANR, NSF, NIDCD +2 partners Linguistics, Sensory and Behavioural Biology, Communication ScienceNIDCD,CLARIN,ANR,NSF,NIDCD,CMU,NSF
re3data: r3d100010887
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For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:Human Immunology Project Consortium, Human Immunology Project Consortium Immunology, Virology, Cell BiologyHuman Immunology Project Consortium,Human Immunology Project Consortium
The Human Immunology Project Consortium (HIPC) Dashboard is a web-application supporting the storage and dissemination of immune signatures curated from published literature. Using computational analysis of large-scale experimental data from high-throughput systems biology approaches coupled with detailed clinical phenotyping in well-characterized human cohorts, the HIPC aims to identify molecular “signatures” that correlate with the outcomes of vaccinations, adjuvants or natural infections in humans. To facilitate dissemination of this information to the scientific community the Consortium has developed the “HIPC Dashboard”, a web interface that provides access to consistently annotated immune signatures generated by HIPC activities as well as curated from the literature.
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re3data: r3d100014209
The Genome-Wide Association Studies (GWAS) Catalog provides a consistent, searchable, visualisable and freely available database of published SNP-trait associations, which can be easily integrated with other resources, and is accessed by scientists, clinicians and other users worldwide. Within the Catalog, all eligible GWA studies are identified by literature search and assessed by curators, who then extract the reported trait, significant SNP-trait associations, and sample metadata. The Catalog also publishes a GWAS diagram of SNP-trait associations, mapped onto the human genome by chromosomal location and displayed on the human karyotype. Since 2010, delivery and development of the Catalog has been a collaborative project between the EMBL-EBI and NHGRI. Since 2108 we have accepted statistics files for eligible publications, these can be submitted prior to publication. https://www.ebi.ac.uk/gwas/deposition
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For further information contact us at helpdesk@openaire.eu - Data Repository Germany, United States Compatibility:OpenAIRE 3.0 (OA, funding)Partners:BMBF, TEI, Georg-August-Universität Göttingen, Niedersächsische Staats- und Universitätsbibliothek, Humanities Data Center Partner, Georg-August-Universität Göttingen, Niedersächsische Staats- und Universitätsbibliothek +3 partners Humanities and Social Sciences, Linguistics, Literary StudiesBMBF,TEI,Georg-August-Universität Göttingen, Niedersächsische Staats- und Universitätsbibliothek,Humanities Data Center Partner,Georg-August-Universität Göttingen, Niedersächsische Staats- und Universitätsbibliothek,TEI,BMBF,Humanities Data Center PartnerOAI-PMH URL: https://textgridlab.org/1.0/tgoaipmh/oai
The TextGrid Repository offers an extensive searchable and adaptable corpus of XML/TEI encoded texts and images. Amongst the continuously growing corpus is the Digital Library of TextGrid, which consists of works of more than 600 authors of German fiction (prose, verse and drama), as well as nonfiction from the beginning of the printing press to the early 20th century.
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