- US
- NL
- EU
- Thematic: No
- US
- NL
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- Data Repository Netherlands Compatibility:Not yet registeredPartners:KB Humanities and Social Sciences, History, LinguisticsKB
re3data: r3d100013609 , r3d100013609
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This resource details DNA methylation profiles in human and mouse brain. This database includes genome-wide DNA methylation profiles for human and mouse brains. The DNA methylation profiles were generated by Methylation Mapping Analysis by Paired-end Sequencing (Methyl-MAPS) method and analyzed by Methyl-Analyzer software package. The methylation profiles cover over 80% CpG dinucleotides in human and mouse brains in single-CpG resolution. The integrated genome browser (modified from UCSC Genome Browser allows users to browse DNA methylation profiles in specific genomic loci, to search specific methylation patterns, and to compare methylation patterns between individual samples.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:LP DAAC, LP DAAC Geography, Earth Science, Remote SensingLP DAAC,LP DAAC
The Global Visualization Viewer (GloVis) was created to easily view, order, and download remotely sensed data in the public domain. In GloVis, users may narrow down results, view multiple scenes at once, step through time points, view metadata and download the full-band source imagery.
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re3data: r3d100011876 , r3d100011876
This repository provides several plant genomic and phenotypic datasets resulting from IPK and German Plant Phenotyping Network (DPPN) research activities. It was established in January 2015. The background of the study is in plant genetic resources, in particular the association of genotypes and phenotypes. This archive aims to provide data from the "system plant" - from the root to bloom and seed, as well from sequence analysis to systems biology.Ge
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re3data: r3d100010877 , r3d100010877
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Netherlands Compatibility:OpenAIRE CRIS v1.1Partners:University of Twente MultidisciplinaryUniversity of Twente
This is the institutional repository containing the scientific output of the University of Twente. Not all materials listed are full text, although it is estimated that over 50% of them are. The remainder are bibliographic entries only, without full-text. Saved searches can be saved as alerts to notify readers of relevant newly added content.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:Department of Genetics, Stanford University, USA, Genomics Institute, University of California, Santa Cruz, CA, USA, Department of Genetics, Stanford University, USA Functional Genomics, Epigenetics, Nucleic acid sequenceDepartment of Genetics, Stanford University, USA,Genomics Institute, University of California, Santa Cruz, CA, USA,Department of Genetics, Stanford University, USA
The ENCODE (Encyclopedia of DNA Elements) Consortium is an international collaboration of research groups funded by the National Human Genome Research Institute (NHGRI). The goal of ENCODE is to build a comprehensive parts list of functional elements in the human genome including elements that act at the protein and RNA levels, and regulatory elements that control cells and circumstances in which a gene is active. ENCODE investigators employ a variety of assays and methods to identify functional elements. The discovery and annotation of gene elements is accomplished primarily by sequencing a diverse range of RNA sources, comparative genomics, integrative bioinformatic methods, and human curation. Regulatory elements are typically investigated through DNA hypersensitivity assays, assays of DNA methylation, and immunoprecipitation (IP) of proteins that interact with DNA and RNA, i.e., modified histones, transcription factors, chromatin regulators, and RNA-binding proteins, followed by sequencing.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States, Netherlands, European Union Compatibility:collected from a compatible aggregatorPartners:NIDCD, CLARIN, ANR, NSF, NIDCD +2 partners Linguistics, Sensory and Behavioural Biology, Communication ScienceNIDCD,CLARIN,ANR,NSF,NIDCD,CMU,NSF
re3data: r3d100010887
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- Data Repository Netherlands Compatibility:Not yet registeredPartners:KB Humanities and Social Sciences, History, LinguisticsKB
re3data: r3d100013609 , r3d100013609
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This resource details DNA methylation profiles in human and mouse brain. This database includes genome-wide DNA methylation profiles for human and mouse brains. The DNA methylation profiles were generated by Methylation Mapping Analysis by Paired-end Sequencing (Methyl-MAPS) method and analyzed by Methyl-Analyzer software package. The methylation profiles cover over 80% CpG dinucleotides in human and mouse brains in single-CpG resolution. The integrated genome browser (modified from UCSC Genome Browser allows users to browse DNA methylation profiles in specific genomic loci, to search specific methylation patterns, and to compare methylation patterns between individual samples.
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The Global Visualization Viewer (GloVis) was created to easily view, order, and download remotely sensed data in the public domain. In GloVis, users may narrow down results, view multiple scenes at once, step through time points, view metadata and download the full-band source imagery.
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re3data: r3d100011876 , r3d100011876
This repository provides several plant genomic and phenotypic datasets resulting from IPK and German Plant Phenotyping Network (DPPN) research activities. It was established in January 2015. The background of the study is in plant genetic resources, in particular the association of genotypes and phenotypes. This archive aims to provide data from the "system plant" - from the root to bloom and seed, as well from sequence analysis to systems biology.Ge
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For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:ROAR, APUA, ROAR, NIH, NIH +1 partners Life Sciences, Microbiology, Virology and Immunology, Medical Microbiology, Molecular Infection BiologyROAR,APUA,ROAR,NIH,NIH,APUA
re3data: r3d100010877 , r3d100010877
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For further information contact us at helpdesk@openaire.eu - Institutional Repository Netherlands Compatibility:OpenAIRE CRIS v1.1Partners:University of Twente MultidisciplinaryUniversity of Twente
This is the institutional repository containing the scientific output of the University of Twente. Not all materials listed are full text, although it is estimated that over 50% of them are. The remainder are bibliographic entries only, without full-text. Saved searches can be saved as alerts to notify readers of relevant newly added content.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:Department of Genetics, Stanford University, USA, Genomics Institute, University of California, Santa Cruz, CA, USA, Department of Genetics, Stanford University, USA Functional Genomics, Epigenetics, Nucleic acid sequenceDepartment of Genetics, Stanford University, USA,Genomics Institute, University of California, Santa Cruz, CA, USA,Department of Genetics, Stanford University, USA
The ENCODE (Encyclopedia of DNA Elements) Consortium is an international collaboration of research groups funded by the National Human Genome Research Institute (NHGRI). The goal of ENCODE is to build a comprehensive parts list of functional elements in the human genome including elements that act at the protein and RNA levels, and regulatory elements that control cells and circumstances in which a gene is active. ENCODE investigators employ a variety of assays and methods to identify functional elements. The discovery and annotation of gene elements is accomplished primarily by sequencing a diverse range of RNA sources, comparative genomics, integrative bioinformatic methods, and human curation. Regulatory elements are typically investigated through DNA hypersensitivity assays, assays of DNA methylation, and immunoprecipitation (IP) of proteins that interact with DNA and RNA, i.e., modified histones, transcription factors, chromatin regulators, and RNA-binding proteins, followed by sequencing.
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For further information contact us at helpdesk@openaire.eu - Data Repository United States, Netherlands, European Union Compatibility:collected from a compatible aggregatorPartners:NIDCD, CLARIN, ANR, NSF, NIDCD +2 partners Linguistics, Sensory and Behavioural Biology, Communication ScienceNIDCD,CLARIN,ANR,NSF,NIDCD,CMU,NSF
re3data: r3d100010887
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