- home
- Advanced Search
- Data Repository United States Compatibility:Not yet registeredPartners:Ocean Biology Processing Group NASA Atmospheric Science, Oceanography, Earth ScienceOcean Biology Processing Group NASA
re3data: r3d100011683
Website URL: https://seabass.gsfc.nasa.gov/SeaWiFS Bio-optical Archive and Storage System (SeaBASS) is a publicly shared archive of in situ oceanographic and atmospheric data maintained by the NASA Ocean Biology Processing Group (OBPG). Archived data include measurements of apparent and inherent optical properties, phytoplankton pigment concentrations, and other related oceanographic and atmospheric data, such as water temperature, salinity, stimulated fluorescence, and aerosol optical thickness. Data are collected using a number of different instrument packages, such as profilers, buoys, and hand-held instruments, and manufacturers on a variety of platforms, including ships and moorings.
more_vert - Data Repository United Kingdom, Canada, United States Compatibility:Not yet registeredPartners:University of Edinburgh, UK, University of Montreal, TCNJ, Lunenfeld-Tanenbaum Research Institute Life Science, Cheminformatics, Systems BiologyUniversity of Edinburgh, UK,University of Montreal,TCNJ,Lunenfeld-Tanenbaum Research Institute
re3data: r3d100010350
Website URL: http://www.thebiogrid.orgThe Biological General Repository for Interaction Datasets (BioGRID) is a public database that archives and disseminates genetic and protein interaction data from model organisms and humans. BioGRID currently holds over 1,740,000 interactions curated from both high-throughput datasets and individual focused studies, as derived from over 70,000+ publications in the primary literature. Complete coverage of the entire literature is maintained for budding yeast (S. cerevisiae), fission yeast (S. pombe) and thale cress (A. thaliana), and efforts to expand curation across multiple metazoan species are underway. All data are freely provided via our search index and available for download in many standardized formats.
more_vert - Data Repository United States Compatibility:Not yet registeredPartners:TCNJ Subject AgnosticTCNJWebsite URL: https://datacommons.princeton.edu
Princeton Data Commons is a multidisciplinary digital repository offering expert curation services and designed to archive and publicly disseminate data and code that are the result of research activities by Princeton University's research community.
more_vert - Data Repository United States Compatibility:Not yet registeredPartners:LINCS Consortium, HMS Cell Biology, reagent, cancerLINCS Consortium,HMS
re3data: r3d100011833
Website URL: https://lincs.hms.harvard.edu/db/the HMS LINCS Database contains all publicly available HMS LINCS datasets and information for each dataset about experimental reagents (small molecule perturbagens, cells, antibodies, and proteins) and experimental and data analysis protocols. The HMS LINCS website also provides additional resources for many datasets.
more_vert - Data Repository United States Compatibility:Not yet registeredPartners:NOS Atmospheric Science, Geography, OceanographyNOS
re3data: r3d100011030
Website URL: https://tidesandcurrents.noaa.gov/NOAA’s Center for Operational Oceanographic Products and Services (CO-OPS) provides accurate, reliable, and timely tides, water levels, currents, and other coastal oceanographic and meteorological information. CO-OPs supports safe and efficient maritime commerce and transportation, help protect public health and safety, and promote robust, resilient coastal communities. CO-OPS maintains ocean observing infrastructure, including more than 200 permanent water level stations on the U.S. coasts and Great Lakes, an integrated system of real-time sensors concentrated in busy seaports, and temporary meters that collect observations for tidal current predictions. Through these systems, they provide historic and real-time data, forecasts, predictions, and scientific analyses that protect life, the economy, and the environment on the coast.
more_vert - Data Repository United States Compatibility:Not yet registeredPartners:Atomic and Molecular Physics, Center for Astrophysics, Harvard & Smithsonian Atmospheric Science, Astrophysics, spectroscopyAtomic and Molecular Physics, Center for Astrophysics, Harvard & Smithsonian
re3data: r3d100012205
Website URL: https://hitran.org/HITRAN is an acronym for high-resolution transmission molecular absorption database. HITRAN is a compilation of spectroscopic parameters that a variety of computer codes use to predict and simulate the transmission and emission of light in the atmosphere. HITRAN data is predominantly used in atmospheric science and astrophysics, but it has many applications throughout science, industry, and technology.
more_vert - Data Repository United States Compatibility:Not yet registeredPartners:JHU Physiology, Electrophysiology, NeurophysiologyJHUWebsite URL: https://emberarchive.org/
EMBER is the BRAIN Initiative data archive for multi-modal neurophysiological and behavioral data, supporting the NIH Brain Behavior Quantification and Synchronization (BBQS) Program.
more_vert - Data Repository United States Compatibility:Not yet registeredPartners:UW Structural Biology, Structure, Protein structureUW
re3data: r3d100010191
Website URL: https://bmrb.io/BMRB collects, annotates, archives, and disseminates (worldwide in the public domain) the important spectral and quantitative data derived from NMR spectroscopic investigations of biological macromolecules and metabolites. Its goal is to empower scientists in their analysis of the structure, dynamics, and chemistry of biological systems and to support further development of the field of biomolecular NMR spectroscopy.
more_vert - Data Repository Belgium, United States Compatibility:Not yet registeredPartners:UMD, Quest Diagnostics (United States) Life Science, Preclinical Studies, Biomedical ScienceUMD,Quest Diagnostics (United States)Website URL: http://www.umd.be/BRCA1/
BRCA Share is a novel gene datashare initiative that provides scientists and commercial laboratory organizations around the world with open access to BRCA Share (formerly UMD-BRCA1) contains BRCA1 and BRCA2 genetic data. The program’s goal is to accelerate research on BRCA gene mutations, particularly variants of uncertain significance, to improve the ability of clinical laboratory diagnostics to predict which individuals are at risk of developing these cancers.
more_vert - Data Repository Germany Compatibility:Not yet registeredPartners:Ribocon (Germany), DSMZ, Microbial Genomics and Bioinformatics Research Group, Max Plank Institute for Marine Microbiology (MPIMM), Bremen, Germany Life Science, Phylogeny, Taxonomic classificationRibocon (Germany),DSMZ,Microbial Genomics and Bioinformatics Research Group, Max Plank Institute for Marine Microbiology (MPIMM), Bremen, Germany
re3data: r3d100011323
Website URL: https://www.arb-silva.deSILVA is a comprehensive, quality-controlled web resource for up-to-date aligned ribosomal RNA (rRNA) gene sequences from the Bacteria, Archaea and Eukaryota domains alongside supplementary online services. In addition to data products, SILVA provides various online tools such as alignment and classification, phylogenetic tree calculation and viewer, probe/primer matching, and an amplicon analysis pipeline. With every full release a curated guide tree is provided that contains the latest taxonomy and nomenclature based on multiple references. The SILVA curation team is now part of Bergey’s Trustees and the Protist Reference Taxonomy Project UniEuk, which will further improve the quality of SILVA taxonomy. In order to cope with the dramatic expansion of bacterial and archaeal phyla, we have also teamed up with phylogenomic taxonomy efforts (i.e. Genome Taxonomy Database). SILVA is an ELIXIR Core Data Resource.
more_vert
- Data Repository United States Compatibility:Not yet registeredPartners:Ocean Biology Processing Group NASA Atmospheric Science, Oceanography, Earth ScienceOcean Biology Processing Group NASA
re3data: r3d100011683
Website URL: https://seabass.gsfc.nasa.gov/SeaWiFS Bio-optical Archive and Storage System (SeaBASS) is a publicly shared archive of in situ oceanographic and atmospheric data maintained by the NASA Ocean Biology Processing Group (OBPG). Archived data include measurements of apparent and inherent optical properties, phytoplankton pigment concentrations, and other related oceanographic and atmospheric data, such as water temperature, salinity, stimulated fluorescence, and aerosol optical thickness. Data are collected using a number of different instrument packages, such as profilers, buoys, and hand-held instruments, and manufacturers on a variety of platforms, including ships and moorings.
more_vert - Data Repository United Kingdom, Canada, United States Compatibility:Not yet registeredPartners:University of Edinburgh, UK, University of Montreal, TCNJ, Lunenfeld-Tanenbaum Research Institute Life Science, Cheminformatics, Systems BiologyUniversity of Edinburgh, UK,University of Montreal,TCNJ,Lunenfeld-Tanenbaum Research Institute
re3data: r3d100010350
Website URL: http://www.thebiogrid.orgThe Biological General Repository for Interaction Datasets (BioGRID) is a public database that archives and disseminates genetic and protein interaction data from model organisms and humans. BioGRID currently holds over 1,740,000 interactions curated from both high-throughput datasets and individual focused studies, as derived from over 70,000+ publications in the primary literature. Complete coverage of the entire literature is maintained for budding yeast (S. cerevisiae), fission yeast (S. pombe) and thale cress (A. thaliana), and efforts to expand curation across multiple metazoan species are underway. All data are freely provided via our search index and available for download in many standardized formats.
more_vert - Data Repository United States Compatibility:Not yet registeredPartners:TCNJ Subject AgnosticTCNJWebsite URL: https://datacommons.princeton.edu
Princeton Data Commons is a multidisciplinary digital repository offering expert curation services and designed to archive and publicly disseminate data and code that are the result of research activities by Princeton University's research community.
more_vert - Data Repository United States Compatibility:Not yet registeredPartners:LINCS Consortium, HMS Cell Biology, reagent, cancerLINCS Consortium,HMS
re3data: r3d100011833
Website URL: https://lincs.hms.harvard.edu/db/the HMS LINCS Database contains all publicly available HMS LINCS datasets and information for each dataset about experimental reagents (small molecule perturbagens, cells, antibodies, and proteins) and experimental and data analysis protocols. The HMS LINCS website also provides additional resources for many datasets.
more_vert - Data Repository United States Compatibility:Not yet registeredPartners:NOS Atmospheric Science, Geography, OceanographyNOS
re3data: r3d100011030
Website URL: https://tidesandcurrents.noaa.gov/NOAA’s Center for Operational Oceanographic Products and Services (CO-OPS) provides accurate, reliable, and timely tides, water levels, currents, and other coastal oceanographic and meteorological information. CO-OPs supports safe and efficient maritime commerce and transportation, help protect public health and safety, and promote robust, resilient coastal communities. CO-OPS maintains ocean observing infrastructure, including more than 200 permanent water level stations on the U.S. coasts and Great Lakes, an integrated system of real-time sensors concentrated in busy seaports, and temporary meters that collect observations for tidal current predictions. Through these systems, they provide historic and real-time data, forecasts, predictions, and scientific analyses that protect life, the economy, and the environment on the coast.
more_vert - Data Repository United States Compatibility:Not yet registeredPartners:Atomic and Molecular Physics, Center for Astrophysics, Harvard & Smithsonian Atmospheric Science, Astrophysics, spectroscopyAtomic and Molecular Physics, Center for Astrophysics, Harvard & Smithsonian
re3data: r3d100012205
Website URL: https://hitran.org/HITRAN is an acronym for high-resolution transmission molecular absorption database. HITRAN is a compilation of spectroscopic parameters that a variety of computer codes use to predict and simulate the transmission and emission of light in the atmosphere. HITRAN data is predominantly used in atmospheric science and astrophysics, but it has many applications throughout science, industry, and technology.
more_vert - Data Repository United States Compatibility:Not yet registeredPartners:JHU Physiology, Electrophysiology, NeurophysiologyJHUWebsite URL: https://emberarchive.org/
EMBER is the BRAIN Initiative data archive for multi-modal neurophysiological and behavioral data, supporting the NIH Brain Behavior Quantification and Synchronization (BBQS) Program.
more_vert - Data Repository United States Compatibility:Not yet registeredPartners:UW Structural Biology, Structure, Protein structureUW
re3data: r3d100010191
Website URL: https://bmrb.io/BMRB collects, annotates, archives, and disseminates (worldwide in the public domain) the important spectral and quantitative data derived from NMR spectroscopic investigations of biological macromolecules and metabolites. Its goal is to empower scientists in their analysis of the structure, dynamics, and chemistry of biological systems and to support further development of the field of biomolecular NMR spectroscopy.
more_vert - Data Repository Belgium, United States Compatibility:Not yet registeredPartners:UMD, Quest Diagnostics (United States) Life Science, Preclinical Studies, Biomedical ScienceUMD,Quest Diagnostics (United States)Website URL: http://www.umd.be/BRCA1/
BRCA Share is a novel gene datashare initiative that provides scientists and commercial laboratory organizations around the world with open access to BRCA Share (formerly UMD-BRCA1) contains BRCA1 and BRCA2 genetic data. The program’s goal is to accelerate research on BRCA gene mutations, particularly variants of uncertain significance, to improve the ability of clinical laboratory diagnostics to predict which individuals are at risk of developing these cancers.
more_vert - Data Repository Germany Compatibility:Not yet registeredPartners:Ribocon (Germany), DSMZ, Microbial Genomics and Bioinformatics Research Group, Max Plank Institute for Marine Microbiology (MPIMM), Bremen, Germany Life Science, Phylogeny, Taxonomic classificationRibocon (Germany),DSMZ,Microbial Genomics and Bioinformatics Research Group, Max Plank Institute for Marine Microbiology (MPIMM), Bremen, Germany
re3data: r3d100011323
Website URL: https://www.arb-silva.deSILVA is a comprehensive, quality-controlled web resource for up-to-date aligned ribosomal RNA (rRNA) gene sequences from the Bacteria, Archaea and Eukaryota domains alongside supplementary online services. In addition to data products, SILVA provides various online tools such as alignment and classification, phylogenetic tree calculation and viewer, probe/primer matching, and an amplicon analysis pipeline. With every full release a curated guide tree is provided that contains the latest taxonomy and nomenclature based on multiple references. The SILVA curation team is now part of Bergey’s Trustees and the Protist Reference Taxonomy Project UniEuk, which will further improve the quality of SILVA taxonomy. In order to cope with the dramatic expansion of bacterial and archaeal phyla, we have also teamed up with phylogenomic taxonomy efforts (i.e. Genome Taxonomy Database). SILVA is an ELIXIR Core Data Resource.
more_vert
