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These datasets are associated with the following paper: Metsaranta, J.M., Mamet, S.D., Maillett, J., Barr, A.G. (2021). Comparison of tree-ring and eddy covariance derived annual ecosystem production estimates for jack pine and trembling aspen forests in Saskatchewan, Canada. Agricultural and Forest Meteorology. There are two files: (1) CBMOutput.zip. This contains the hybrid biometric modelled ecosystem C stock and flux estimates. (2) StandReconstructionData.zip. This contains the field measurement data and the tree level biomass and wood volume data for the Stand Reconstruction plots used to develop the hybrid biometric modelled estimates. The data are formatted as .csv files, and an associated Microsoft Excel spreadsheet explains the data columns and provides information on the associated units of measure.

Although GPS coordinates for current populations are not included due to the potential threat of poaching, the climate variables for each species are provided. The records for extant gecko and skinks mainly came from the New Zealand's Department of Conervation Herpetofauna Database. After updating the taxonomy and cleaning the data to reflect the taxonomy as at 2019 of 43 geckos speceis recognised across seven genera and 61 species in genus, we then thinned the occurrence records at a 1 km resolution for all species then predicted distributions for those with > 15 records using species distribution models. The climate variables for each species were selected among annual mean temperature (bio1), maximum temperature of the warmest month (bio5), minimum temperature of the coldest month (bio6), mean temperature of driest quarter (bio9), mean temperature of wettest quarter (bio10), and precipitation of the driest quarter (bio17). To reduce multicollinearity in species distribution models for each species, we only retained climate variables with a variable inflation factor < 10. The climate variables were from the CHELSA database (https://chelsa-climate.org/), which can be freely downloaded for current and future scenarios. We also provide MCC tree files for the geckos and skinks. The phylogenetic trees have been constructed for NZ geckos by (Nielsen et al., 2011) and for NZ skinks by (Chapple et al., 2009). For geckos we used a subset of the sequences used by Nielsen et al. (2011) for four genes, two nuclear (RAG 1, PDC) and two mitochondrial (16S, ND2 along with flanking tRNA sequences). For skinks, we used sequences from Chapple et al. (2009) for one nuclear (RAG 1) and five mitochondrial (ND2, ND4, Cyt b, 12S and 16S) genes, and additional ND2 sequences for taxa not included in the original phylogeny (Chapple et al., 2011, p. 201). In total we used sequences for all recognised extant taxa (Hitchmough et al., 2016) as at 2019 except for three species of skink (O. aff. inconspicuum “Okuru”, O. robinsoni, and O. aff. inconspicuum “North Otago”) and two species of gecko (M. “Cupola” and W. “Kaikouras”) for which genetic data were not available. Aim: The primary drivers of species and population extirpations have been habitat loss, overexploitation, and invasive species, but human-mediated climate change is expected to be a major driver in future. To minimise biodiversity loss, conservation managers should identify species vulnerable to climate change and prioritise their protection. Here, we estimate climatic suitability for two speciose taxonomic groups, then use phylogenetic analyses to assess vulnerability to climate change. Location: Aotearoa New Zealand (NZ) Taxa: NZ lizards: diplodactylid geckos and eugongylinae skinks Methods: We built correlative species distribution models (SDMs) for NZ geckos and skinks to estimate climatic suitability under current climate and 2070 future-climate scenarios. We then used Bayesian phylogenetic mixed models (BPMMs) to assess vulnerability for both groups with predictor variables for life history traits (body size and activity phase) and current distribution (elevation and latitude). We explored two scenarios: an unlimited dispersal scenario, where projections track climate, and a no-dispersal scenario, where projections are restricted to areas currently identified as suitable. Results: SDMs projected vulnerability to climate change for most modelled lizards. For species’ ranges projected to decline in climatically suitable areas, average decreases were between 42–45% for geckos and 33–91% for skinks, although area did increase or remain stable for a minority of species. For the no-dispersal scenario, the average decrease for geckos was 37–52% and for skinks was 33–52%. Our BPMMs showed phylogenetic signal in climate change vulnerability for both groups, with elevation increasing vulnerability for geckos, and body size reducing vulnerability for skinks. Main conclusions: NZ lizards showed variable vulnerability to climate change, with most species’ ranges predicted to decrease. For species whose suitable climatic space is projected to disappear from within their current range, managed relocation could be considered to establish populations in regions that will be suitable under future climates.

This dataset contains the underlying data for the following publication: Doukas, H., Spiliotis, E., Jafari, M. A., Giarola, S. & Nikas, A. (2021). Low-cost emissions cuts in container shipping: Thinking inside the box. Transportation Research Part D: Transport and Environment, 94, 102815, https://doi.org/10.1016/j.trd.2021.102815.

Aim: We propose that forest trees create a vertical dimension for ecological niche variation that generates different regimes of climatic exposure, which in turn drives species elevation distributions. We test this hypothesis by statistically modelling the vertical and elevation distributions and microclimate exposure of rainforest ants. Location: Wet Tropics Bioregion, Australia Methods: We conducted 60 ground-to-canopy surveys to determine the vertical (tree) and elevation distributions, and microclimate exposure of ants (101 species) at 15 sites along four mountain ranges. We statistically modelled elevation range size as a function of ant species’ vertical niche breadth and exposure to temperature variance for 55 species found at two or more trees. Results: We found a positive association between vertical niche and elevation range of ant species: for every 3 m increase in vertical niche breadth our models predict a ~150% increase in mean elevation range size. Temperature variance increased with vertical height along the arboreal gradient and ant species exposure to temperature variance explained some of the variation in elevation range size. Main Conclusions: We demonstrate that arboreal ants have broader elevation ranges than ground-dwelling ants and are likely to have increased resilience to climatic variance. The capacity of species to expand their niche by climbing trees could influence their ability to persist over broader elevation ranges. We propose that wherever vertical layering exists - from oceans to forest ecosystems - vertical niche breadth is a potential mechanism driving macrogeographic distribution patterns and resilience to climate change. Data_collections.csv Main survey collections data in a site by species matrix showing all data for all sites surveyed. Tuna baited vials were placed every three metres from ground to canopy in trees at elevation sites at four subregion mountain ranges of the Australian Wet Tropics Bioregion. Note data file includes empty vials that lacked ants. Microclimate_AthertonTemp.csv This file contains Atherton Uplands temperature data from ibuttons deployed at one tree per elevation (200, 400, 600, 800, 1000) at every three metres in height in Dec-Jan 2017- 2018 set to record every half hour. See file Metadata for details of column names and data values.

Demographic data of Sedum lanceolatum under a climate manipulation experiment (heating and watering). Dataset includes one .csv with demographic data for 232 individuals monitored over 2013-2014 which was used, in part, to draw conclusions in "Elevation effects on vital rate sensitivities generate variation in neighbor effects on population growth rate in Sedum lanceolatum" by Herzog et al. (in review). All data was collected under a watering and warming experiment as part of the Alpine Treeline Warming Experiment at Niwot Ridge, Colorado, USA. There are two main data file formats in this archive: comma-separated values (.csv) which can be read using any simple text editor program, such as TextEdit (Mac) and Notepad (Windows). The .pdf data user’s guide can be read using Adobe Acrobat Reader, or any other compatible software.

L'empreinte carbone des technologies numériques est une préoccupation depuis plusieurs années. Cela concerne principalement la consommation électrique des datacenters; beaucoup de fournisseurs dans le domaine du cloud s'engagent à n'utiliser que des sources d'énergie renouvelables. Cependant, cette approche néglige la phase de fabrication des composants des infrastructures numériques. Nous considérons dans ce travail de recherche la question du dimensionnement des énergies renouvelables pour une infrastructure de type cloud géographiquement distribuée autour de la planète, considérant l'impact carbone à la fois de l'électricité issue du réseau électrique local en fonction de la location de sa production, et de la fabrication des panneaux photovoltaïques et des batteries pour la part renouvelable de l'alimentation des ressources. Nous avons modélisé ce problème de minimisation de l'impact carbone d'une telle infrastructure cloud sous la forme d'un programme linéaire. La solution est le dimensionnement optimal d'une fédération de cloud sur une année complète en fonction des localisations des datacenters, des traces réelles des travaux à exécuter et valeurs d'irradiation solaire heure par heure. Nos résultats montrent une réduction de l'impact carbone de 30% comparés à la même architecture cloud totalement alimentée par des énergies renouvelables et 85% comparés à un modèle qui n'utiliserait qu'une alimentation via le réseau local d'électricité. The carbon footprint of IT technologies has been a significant concern in recent years. This concern mainly focuses on the electricity consumption of data centers; many cloud suppliers commit to using 100% of renewable energy sources. However, this approach neglects the impact of device manufacturing. We consider in this work the question of dimensioning the renewable energy sources of a geographically distributed cloud with considering the carbon impact of both the grid electricity consumption in the considered locations and the manufacturing of solar panels and batteries. We design a linear program to optimize cloud dimensioning over one year, considering worldwide locations for data centers, real-life workload traces, and solar irradiation values. Our results show a carbon footprint reduction of about 30% compared to a cloud fully supplied by solar energy and of 85% compared to the 100% grid electricity model. Données computationnelles ou de simulation: En tenant compte des données en entrée (description de la fédération de centres de données, fichiers de configuration appropriés, conditions météorologiques, etc.), le logiciel est capable de proposer un dimensionnement optimal pour la fédération des datacenters à faible émission de carbone distribuée à l'échelle mondiale : surface des panneaux photovoltaïques et capacité des batteries pour chaque datacenter de la fédération. Des scripts sont disponibles pour mettre en forme les solutions proposées. Simulation or computational data: Considering given inputs (datacenter federation, appropriate configuration files, weather conditions, etc.), the software is able to propose an optimal sizing for the globally distributed low carbon cloud federation: surface area of solar panels, battery capacity for each data center location. . Scripts are available to shape the optimal configuration. Audience: Research, Policy maker UpdatePeriodicity: as needed

Project: Coupled Model Intercomparison Project Phase 6 (CMIP6) datasets - These data have been generated as part of the internationally-coordinated Coupled Model Intercomparison Project Phase 6 (CMIP6; see also GMD Special Issue: http://www.geosci-model-dev.net/special_issue590.html). The simulation data provides a basis for climate research designed to answer fundamental science questions and serves as resource for authors of the Sixth Assessment Report of the Intergovernmental Panel on Climate Change (IPCC-AR6). CMIP6 is a project coordinated by the Working Group on Coupled Modelling (WGCM) as part of the World Climate Research Programme (WCRP). Phase 6 builds on previous phases executed under the leadership of the Program for Climate Model Diagnosis and Intercomparison (PCMDI) and relies on the Earth System Grid Federation (ESGF) and the Centre for Environmental Data Analysis (CEDA) along with numerous related activities for implementation. The original data is hosted and partially replicated on a federated collection of data nodes, and most of the data relied on by the IPCC is being archived for long-term preservation at the IPCC Data Distribution Centre (IPCC DDC) hosted by the German Climate Computing Center (DKRZ). The project includes simulations from about 120 global climate models and around 45 institutions and organizations worldwide. Summary: These data include the subset used by IPCC AR6 WGI authors of the datasets originally published in ESGF for 'CMIP6.ScenarioMIP.UA.MCM-UA-1-0' with the full Data Reference Syntax following the template 'mip_era.activity_id.institution_id.source_id.experiment_id.member_id.table_id.variable_id.grid_label.version'. The Manabe Climate Model v1.0 - University of Arizona climate model, released in 1991, includes the following components: aerosol: Modifies surface albedoes (Haywood et al. 1997, doi: 10.1175/1520-0442(1997)010<1562:GCMCOT>2.0.CO;2), atmos: R30L14 (3.75 X 2.5 degree (long-lat) configuration; 96 x 80 longitude/latitude; 14 levels; top level 0.015 sigma, 15 mb), land: Standard Manabe bucket hydrology scheme (Manabe 1969, doi: 10.1175/1520-0493(1969)097<0739:CATOC>2.3.CO;2), landIce: Specified location - invariant in time, has high albedo and latent heat capacity, ocean: MOM1.0 (MOM1, 1.875 X 2.5 deg; 192 x 80 longitude/latitude; 18 levels; top grid cell 0-40 m), seaIce: Thermodynamic ice model (free drift dynamics). The model was run by the Department of Geosciences, University of Arizona, Tucson, AZ 85721, USA (UA) in native nominal resolutions: aerosol: 250 km, atmos: 250 km, land: 250 km, landIce: 250 km, ocean: 250 km, seaIce: 250 km.

Project: Coupled Model Intercomparison Project Phase 6 (CMIP6) datasets - These data have been generated as part of the internationally-coordinated Coupled Model Intercomparison Project Phase 6 (CMIP6; see also GMD Special Issue: http://www.geosci-model-dev.net/special_issue590.html). The simulation data provides a basis for climate research designed to answer fundamental science questions and serves as resource for authors of the Sixth Assessment Report of the Intergovernmental Panel on Climate Change (IPCC-AR6). CMIP6 is a project coordinated by the Working Group on Coupled Modelling (WGCM) as part of the World Climate Research Programme (WCRP). Phase 6 builds on previous phases executed under the leadership of the Program for Climate Model Diagnosis and Intercomparison (PCMDI) and relies on the Earth System Grid Federation (ESGF) and the Centre for Environmental Data Analysis (CEDA) along with numerous related activities for implementation. The original data is hosted and partially replicated on a federated collection of data nodes, and most of the data relied on by the IPCC is being archived for long-term preservation at the IPCC Data Distribution Centre (IPCC DDC) hosted by the German Climate Computing Center (DKRZ). The project includes simulations from about 120 global climate models and around 45 institutions and organizations worldwide. Summary: These data include the subset used by IPCC AR6 WGI authors of the datasets originally published in ESGF for 'CMIP6.ScenarioMIP.NOAA-GFDL.GFDL-ESM4.ssp245' with the full Data Reference Syntax following the template 'mip_era.activity_id.institution_id.source_id.experiment_id.member_id.table_id.variable_id.grid_label.version'. The GFDL-ESM4 climate model, released in 2018, includes the following components: aerosol: interactive, atmos: GFDL-AM4.1 (Cubed-sphere (c96) - 1 degree nominal horizontal resolution; 360 x 180 longitude/latitude; 49 levels; top level 1 Pa), atmosChem: GFDL-ATMCHEM4.1 (full atmospheric chemistry), land: GFDL-LM4.1, landIce: GFDL-LM4.1, ocean: GFDL-OM4p5 (GFDL-MOM6, tripolar - nominal 0.5 deg; 720 x 576 longitude/latitude; 75 levels; top grid cell 0-2 m), ocnBgchem: GFDL-COBALTv2, seaIce: GFDL-SIM4p5 (GFDL-SIS2.0, tripolar - nominal 0.5 deg; 720 x 576 longitude/latitude; 5 layers; 5 thickness categories). The model was run by the National Oceanic and Atmospheric Administration, Geophysical Fluid Dynamics Laboratory, Princeton, NJ 08540, USA (NOAA-GFDL) in native nominal resolutions: aerosol: 100 km, atmos: 100 km, atmosChem: 100 km, land: 100 km, landIce: 100 km, ocean: 50 km, ocnBgchem: 50 km, seaIce: 50 km.

The European Multidisciplinary Seafloor and water column Observatory (EMSO-ERIC, https://emso.eu/) is a research infrastructure distributed throughout Europe for seabed and water column observatories. It aims to further explore the oceans, better understand the phenomena that occur on the seabed, and elucidate the critical role that these phenomena play in global Earth systems. This observatory is based on observation sites (or nodes) that have been deployed in strategic locations in European seas, from the Arctic to the Atlantic, from the Mediterranean to the Black Sea. There are currently eleven deepwater nodes plus four shallow water test nodes. EMSO-Western Ligurian Sea Node (https://www.emso-fr.org/fr) is a second generation permanent submarine observatory deployed offshore of Toulon, France, as a follow up of the pioneering ANTARES neutrino telescope. This submarine network, deployed at a depth of 2450m, is part of KM3NeT (https://www.km3net.org/) which has a modular topology designed to connect up to 120 neutrino detection units, i.e. ten times more than ANTARES. The Earth and Sea Science (ESS) instrumentation connected to KM3NeT is based on two complementary components: an Instrumented Interface Module (MII) and an autonomous mooring line (ALBATROSS). The ALBATROSS line is an inductive instrumented mooring line (2000 m) composed of an acoustic communication system, two inductive cables equipped with CTD-O2 sensors, current meters and two instrumented buoys. The MII and the ALMBATROSS mooring line communicate through an acoustic link. The MII is connected to an electro-optical cable via the KM3NeT node allowing the data transfer from and to the land based controlled room.