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Climate change is expected to increase temperature and decrease summer precipitation in Central Europe. Little is known about how warming and drought will affect phenological patterns of oaks, which are considered to possess excellent adaptability to these climatic changes. Here, we investigated bud burst and intra-annual shoot growth of Quercus robur, Q. petraea and Q. pubescens grown on two different forest soils and exposed to air warming and drought. Phenological development was assessed over the course of three growing seasons. Warming advanced bud burst by 1–3 days °C−1 and led to an earlier start of intra-annual shoot growth. Despite this phenological shift, total time span of annual growth and shoot biomass were not affected. Drought changed the frequency and intensity of intra-annual shoot growth and advanced bud burst in the subsequent spring of a severe summer drought by 1–2 days. After re-wetting, shoot growth recovered within a few days, demonstrating the superior drought tolerance of this tree genus. Our findings show that phenological patterns of oaks are modified by warming and drought but also suggest that ontogenetic factors and/or limitations of water and nutrients counteract warming effects on the biomass and the entire span of annual shoot growth. PLoS ONE, 9 (2) ISSN:1932-6203

Dans les latitudes tempérées élevées, les ongulés donnent généralement naissance dans une fenêtre temporelle étroite lorsque les conditions sont optimales pour la survie de la progéniture au printemps ou au début de l'été, et utilisent une photopériode changeante pour les conceptions temporelles afin d'anticiper ces conditions. Cependant, dans les basses latitudes tropicales, la variation de la durée du jour est minime et la variation des précipitations rend le cycle saisonnier moins prévisible. Néanmoins, plusieurs espèces d'ongulés conservent des pics de naissance étroits dans de telles conditions, tandis que d'autres montrent que les naissances se propagent assez largement tout au long de l'année. Nous avons étudié comment la variation des précipitations d'une année à l'autre et d'une année à l'autre a influencé le moment de la reproduction de quatre espèces d'ongulés montrant ces modèles contrastés dans la région de Masai Mara au Kenya. Les quatre espèces présentaient des pics de naissance au cours de la période optimale putative au début de la saison humide. Pour le hartebeest et l'impala, le pic de naissance est diffus et la progéniture naît tout au long de l'année. En revanche, le topi et le phacochère ont montré une concentration saisonnière étroite de naissances, avec des conceptions supprimées une fois que les précipitations mensuelles sont tombées en dessous d'un seuil. Les fortes précipitations de la saison précédente et les fortes pluies précoces de l'année en cours ont amélioré la survie au stade juvénile de toutes les espèces, à l'exception de l'impala. Nos résultats révèlent comment la variation des précipitations affectant la croissance des graminées et donc la nutrition des herbivores peut régir la phénologie reproductive des ongulés dans les latitudes tropicales où la variation de la longueur du jour est minime. Le mécanisme sous-jacent semble être la suppression des conceptions une fois que les gains nutritionnels deviennent insuffisants. En réagissant de manière proximale à la variation des précipitations au cours de l'année, les ongulés de la savane tropicale sont moins susceptibles d'être affectés négativement par les conséquences du réchauffement climatique sur la phénologie de la végétation que les ongulés du Nord montrant un contrôle photopériodique plus rigide sur le moment de la reproduction. En latitudes templadas altas, los ungulados generalmente dan a luz dentro de una ventana de tiempo estrecha cuando las condiciones son óptimas para la supervivencia de la descendencia en primavera o principios del verano, y utilizan conceptos cambiantes de fotoperíodo a tiempo para anticipar estas condiciones. Sin embargo, en latitudes tropicales bajas, la variación de la duración del día es mínima, y la variación de las precipitaciones hace que el ciclo estacional sea menos predecible. Sin embargo, varias especies de ungulados conservan picos de nacimiento estrechos en tales condiciones, mientras que otras muestran nacimientos muy extendidos a lo largo del año. Investigamos cómo la variación interanual de las precipitaciones influyó en el tiempo reproductivo de cuatro especies de ungulados que muestran estos patrones contrastantes en la región de Masai Mara en Kenia. Las cuatro especies exhibieron picos de nacimiento durante el periodo óptimo putativo en la estación húmeda temprana. Para hartebeest e impala, el pico de nacimiento era difuso y las crías nacían durante todo el año. Por el contrario, topi y jabalí mostraron una estrecha concentración estacional de nacimientos, con concepciones suprimidas una vez que las precipitaciones mensuales cayeron por debajo de un nivel umbral. Las altas precipitaciones en la temporada anterior y las altas lluvias tempranas en el año en curso mejoraron la supervivencia en la etapa juvenil para todas las especies, excepto los impalas. Nuestros hallazgos revelan cómo la variación de la precipitación que afecta el crecimiento de la hierba y, por lo tanto, la nutrición de los herbívoros, puede gobernar la fenología reproductiva de los ungulados en latitudes tropicales donde la variación de la duración del día es mínima. El mecanismo subyacente parece ser la supresión de las concepciones una vez que las ganancias nutricionales se vuelven insuficientes. Al responder proximalmente a la variación de las precipitaciones dentro del año, es menos probable que los ungulados de la sabana tropical se vean afectados negativamente por las consecuencias del calentamiento global para la fenología de la vegetación que los ungulados del norte que muestran un control fotoperiódico más rígido sobre el tiempo reproductivo. In high temperate latitudes, ungulates generally give birth within a narrow time window when conditions are optimal for offspring survival in spring or early summer, and use changing photoperiod to time conceptions so as to anticipate these conditions. However, in low tropical latitudes day length variation is minimal, and rainfall variation makes the seasonal cycle less predictable. Nevertheless, several ungulate species retain narrow birth peaks under such conditions, while others show births spread quite widely through the year. We investigated how within-year and between-year variation in rainfall influenced the reproductive timing of four ungulate species showing these contrasting patterns in the Masai Mara region of Kenya. All four species exhibited birth peaks during the putative optimal period in the early wet season. For hartebeest and impala, the birth peak was diffuse and offspring were born throughout the year. In contrast, topi and warthog showed a narrow seasonal concentration of births, with conceptions suppressed once monthly rainfall fell below a threshold level. High rainfall in the previous season and high early rains in the current year enhanced survival into the juvenile stage for all the species except impala. Our findings reveal how rainfall variation affecting grass growth and hence herbivore nutrition can govern the reproductive phenology of ungulates in tropical latitudes where day length variation is minimal. The underlying mechanism seems to be the suppression of conceptions once nutritional gains become insufficient. Through responding proximally to within-year variation in rainfall, tropical savanna ungulates are less likely to be affected adversely by the consequences of global warming for vegetation phenology than northern ungulates showing more rigid photoperiodic control over reproductive timing. في خطوط العرض المعتدلة العالية، تلد ذوات الحوافر عمومًا في غضون فترة زمنية ضيقة عندما تكون الظروف مثالية لبقاء النسل في الربيع أو أوائل الصيف، وتستخدم تغيير الفترة الضوئية إلى مفاهيم زمنية لتوقع هذه الظروف. ومع ذلك، في خطوط العرض الاستوائية المنخفضة، يكون تباين طول اليوم ضئيلًا، ويجعل تباين هطول الأمطار الدورة الموسمية أقل قابلية للتنبؤ. ومع ذلك، فإن العديد من الأنواع ذوات الحوافر تحتفظ بقمم ولادة ضيقة في ظل هذه الظروف، في حين أن البعض الآخر يظهر أن الولادات تنتشر على نطاق واسع خلال العام. لقد حققنا في كيفية تأثير التباين في هطول الأمطار خلال العام وبين الأعوام على التوقيت التكاثري لأربعة أنواع من ذوات الحوافر تظهر هذه الأنماط المتناقضة في منطقة ماساي مارا في كينيا. أظهرت جميع الأنواع الأربعة قمم ولادة خلال الفترة المثلى المفترضة في موسم الأمطار المبكر. بالنسبة لحيوان النحل والامبالا، كانت ذروة الولادة منتشرة وولدت ذرية على مدار العام. على النقيض من ذلك، أظهر التوبي والخنزير الحربي تركيزًا موسميًا ضيقًا للولادات، مع قمع المفاهيم بمجرد انخفاض هطول الأمطار الشهري إلى ما دون مستوى العتبة. عزز ارتفاع هطول الأمطار في الموسم السابق وارتفاع الأمطار المبكرة في العام الحالي البقاء على قيد الحياة في مرحلة الشباب لجميع الأنواع باستثناء الإمبالا. تكشف النتائج التي توصلنا إليها كيف أن تباين هطول الأمطار الذي يؤثر على نمو العشب وبالتالي تغذية الحيوانات العاشبة يمكن أن يحكم الفينولوجيا الإنجابية لذوات الحوافر في خطوط العرض الاستوائية حيث يكون تباين طول اليوم ضئيلًا. يبدو أن الآلية الأساسية هي قمع المفاهيم بمجرد أن تصبح المكاسب الغذائية غير كافية. من خلال الاستجابة القريبة من التباين في هطول الأمطار خلال العام، فإن ذوات الحوافر في السافانا الاستوائية أقل عرضة للتأثر سلبًا بعواقب الاحترار العالمي على فينولوجيا الغطاء النباتي من ذوات الحوافر الشمالية التي تظهر تحكمًا دوريًا ضوئيًا أكثر صرامة في توقيت التكاثر.

Lionfish (Pterois volitans/miles) have invaded the majority of the Caribbean region within five years. As voracious predators of native fishes with a broad habitat distribution, lionfish are poised to cause an unprecedented disruption to coral reef diversity and function. Controls of lionfish densities within its native range are poorly understood, but they have been recorded in the stomachs of large-bodied Caribbean groupers. Whether grouper predation of lionfish is sufficient to act as a biocontrol of the invasive species is unknown, but pest biocontrol by predatory fishes has been reported in other ecosystems. Groupers were surveyed along a chain of Bahamian reefs, including one of the region's most successful marine reserves which supports the top one percentile of Caribbean grouper biomass. Lionfish biomass exhibited a 7-fold and non-linear reduction in relation to the biomass of grouper. While Caribbean grouper appear to be a biocontrol of invasive lionfish, the overexploitation of their populations by fishers, means that their median biomass on Caribbean reefs is an order of magnitude less than in our study. Thus, chronic overfishing will probably prevent natural biocontrol of lionfishes in the Caribbean.

Agricultural management methods, such as cultivation or fallowing, have led to significant changes in soil fertility and hence, crop yield. Such changes may have stemmed from changes in soil microbial communities and associated biogeochemical processes. This phenomenon is particularly true in organic-poor soil in the Loess Plateau of China. In this study, we examined three existing soil management regimes as part of a 10-year field experiment and evaluated their effects on fungal and bacterial community structures by performing high-throughput 454 pyrosequencing. These management regimes were (i) fertilized winter wheat (Triticum aestivum L.) (FW), (ii) continuous natural fallow with weeds but without crop grown (NF), and (iii) continuous bare fallow without weeds or crop grown (BF). After 10 years, soil organic carbon (SOC), microbial biomass carbon (MBC), and available potassium (K) concentrations were highest in NF. Soil N behaved differently, with BF obtaining the highest nitrate nitrogen (N). Meanwhile, slight differences in total N (TN) were observed among FW, NF, and BF. Available phosphorus (P) was highest and available K was lowest in FW. Microbial communities were dominated by Ascomycota (59.1% of fungal sequences), and Acidobacteria, Actinobacteria, Bacteroidetes, Firmicutes, and Proteobacteria (75.7% of bacterial sequences) in FW, NF and BF at the phylum level. Soil management regimes did not affect the fungal and bacterial richness and diversity but significantly modified their community compositions. Compared with FW, the abundances of Ascomycota (fungi phylum) and Alternaria, Gibberella, and Emericella (fungi genus) were increased by NF, whereas the values of Chaetomium, Humicola, and Cryptococcus (fungi genus) were decreased by BF. The abundances of Verrucomicrobia (bacteria phylum), and Steroidobacter (bacteria genus) were increased by NF, and Bacteroides (bacteria genus) was increased by BF. Canonical correspondence analysis showed that SOC, available P, and TN might be the key factors in community formation. Therefore, the decadal absence of plants (BF) affected soil fertility by increased available K and nitrate N, whileas natural fallow (NF) affected soil fertility by increased SOC, available K, and MBC, and they all changed fungal and bacterial community compositions.

Climate change affects the phenology of many species. As temperature and precipitation are thought to control autumn color change in temperate deciduous trees, it is possible that climate change might also affect the phenology of autumn colors. Using long-term data for eight tree species in a New England hardwood forest, we show that the timing and cumulative amount of autumn color are correlated with variation in temperature and precipitation at specific times of the year. A phenological model driven by accumulated cold degree-days and photoperiod reproduces most of the interspecific and interannual variability in the timing of autumn colors. We use this process-oriented model to predict changes in the phenology of autumn colors to 2099, showing that, while responses vary among species, climate change under standard IPCC projections will lead to an overall increase in the amount of autumn colors for most species.

Livestock manure and its management are significant sources of greenhouse gas (GHG). In most Southeast Asian countries, the current GHG emissions are estimated by the Intergovernmental Panel on Climate Change (IPCC) Tier 1 approach using default emission factors. Sun-drying is the dominant manure treatment in Vietnam, and in this study, we measured GHG emissions during manure drying using a chamber-based approach. Results show the emission factors for CH4and N2O were 0.295 ± 0.078 g kg−1volatile solids (VS) and 0.132 ± 0.136 g N2O-N kg−1Ninitial, respectively. We monitored the total bacterial/archaeal community using 16S rRNA gene amplicon sequencing and measured the abundance of functional genes required for methanogenesis (mcrA), nitrification (amoA) and denitrification (nirK,nirSandnosZ) processes. Methane emission occurred only at the beginning of the drying process (days 1 to 3). The results of amplicon sequencing indicated that the relative abundance of methanogens also decreased during this period. Although some nitrification activity was detected, there was no significant N2O emission. These findings well describe the manure management system in south Vietnam and the GHG emission from this manure category, paving the way for higher Tier estimations using country-specific values.