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description Publicationkeyboard_double_arrow_right Article , Other literature type 2024Publisher:Springer Science and Business Media LLC Funded by:UKRI | BBSRC IAA University of G..., WT | Socio-ecological dynamics...UKRI| BBSRC IAA University of Glasgow ,WT| Socio-ecological dynamics of zoonotic and vector-borne diseases in changing landscapes: implications for surveillance and controlFedra Trujillano; G. Jiménez; Luis Edgar Tarazona-Manrique; Najat F. Kahamba; Fredros O. Okumu; Nombre Apollinaire; Gabriel Carrasco-Escobar; Brian Barrett; Kimberly Fornace;Abstract Background In the near future, the incidence of mosquito-borne diseases may expand to new sites due to changes in temperature and rainfall patterns caused by climate change. Therefore, there is a need to use recent technological advances to improve vector surveillance methodologies. Unoccupied Aerial Vehicles (UAVs), often called drones, have been used to collect high-resolution imagery to map detailed information on mosquito habitats and direct control measures to specific areas. Supervised classification approaches have been largely used to automatically detect vector habitats. However, manual data labelling for model training limits their use for rapid responses. Open-source foundation models such as the Meta AI Segment Anything Model (SAM) can facilitate the manual digitalization of high-resolution images. This pre-trained model can assist in extracting features of interest in a diverse range of images. Here, we evaluated the performance of SAM through the Samgeo package, a Python-based wrapper for geospatial data, as it has not been applied to analyse remote sensing images for epidemiological studies. Results We tested the identification of two land cover classes of interest: water bodies and human settlements, using different UAV acquired imagery across five malaria-endemic areas in Africa, South America, and Southeast Asia. We employed manually placed point prompts and text prompts associated with specific classes of interest to guide the image segmentation and assessed the performance in the different geographic contexts. An average Dice coefficient value of 0.67 was obtained for buildings segmentation and 0.73 for water bodies using point prompts. Regarding the use of text prompts, the highest Dice coefficient value reached 0.72 for buildings and 0.70 for water bodies. Nevertheless, the performance was closely dependent on each object, landscape characteristics and selected words, resulting in varying performance. Conclusions Recent models such as SAM can potentially assist manual digitalization of imagery by vector control programs, quickly identifying key features when surveying an area of interest. However, accurate segmentation still requires user-provided manual prompts and corrections to obtain precise segmentation. Further evaluations are necessary, especially for applications in rural areas.
International Journa... arrow_drop_down International Journal of Health GeographicsArticle . 2024 . Peer-reviewedLicense: CC BYData sources: Crossrefadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1186/s12942-024-00371-w&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eu1 citations 1 popularity Average influence Average impulse Average Powered by BIP!
more_vert International Journa... arrow_drop_down International Journal of Health GeographicsArticle . 2024 . Peer-reviewedLicense: CC BYData sources: Crossrefadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1186/s12942-024-00371-w&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article , Journal 2021 United KingdomPublisher:Elsevier BV Authors: Claudio Fuentes Grunewald; Claudio Grunewald; Jose Gayo Pelaez; Vanessa Ndovela; +3 AuthorsClaudio Fuentes Grunewald; Claudio Grunewald; Jose Gayo Pelaez; Vanessa Ndovela; Ellie Wood; Rahul Kapoore; Carole Llewellyn;pmid: 33181476
Implementing a circular economy aimed at reusing resources is becoming increasingly important for industry. Microalgae fit within a circular economy by being able to bioremediate nutrient waste and as a source of biomass for several commercial applications. Here, we report a novel validation of a circular economy concept using microalgae at a relevant industrial scale with a new two-phase process. During the first phase biomass was grown autotrophically, biomass was then concentrated using membrane technology for the second phase where mixotrophic conditions were applied to boost growth further. Microalgae cultures were able to grow (13.8 g/L), uptake and bioremediate nutrients (Nitrogen > 134 mg/L/day) from an anaerobic digestion side-stream (digestate), obtaining high quality microalgae biomass (>45% protein content) suitable for use as animal feed, closing the circular economy loop for industrial applications.
add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1016/j.biortech.2020.124349&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess RoutesGreen bronze 40 citations 40 popularity Top 10% influence Average impulse Top 1% Powered by BIP!
more_vert add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1016/j.biortech.2020.124349&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article 2022Publisher:Springer Science and Business Media LLC Authors: Sudeshna, Mondal; Guruprasad, Samanta; Manuel, De la Sen;pmid: 36085428
In theoretical ecology, recent field experiments on terrestrial vertebrates observe that the predator-prey interaction can not only be curtailed by direct consumption but also governed by some indirect effects such as the fear of predator which may reduce the reproduction rate of prey individuals. Based on this fact, we have developed and explored the predator-prey interaction with the influence of both cost and benefit of fear effect (felt by prey). A Holling type III functional response with the effect of habitat complexity has been taken to consume the prey biomass. Positivity and boundedness of the studied system prove that the model is well-behaved. The uniform persistence of the studied system is derived analytically under some parametric restrictions. The feasibility conditions and stability criteria of each equilibrium points have been discussed. Next, we have exhibited the existence of Hopf-bifurcation around the interior equilibrium point. Our mathematical analyses show that habitat complexity and fear effect both have a great impact on the persistence of the predator biomass. Furthermore, we have investigated the effect of breeding delay parameter such that the system loses its stability behaviour and enters into a limit cycle oscillations through Hopf-bifurcation. Numerical simulations are illustrated to verify our analytical outcomes. Numerically, we have perturbed the death rates of prey and predator species with Gaussian white noise terms due to the effects of environmental fluctuations.
Bulletin of Mathemat... arrow_drop_down Bulletin of Mathematical BiologyArticle . 2022 . Peer-reviewedLicense: Springer TDMData sources: Crossrefadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1007/s11538-022-01067-7&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess Routesbronze 3 citations 3 popularity Top 10% influence Average impulse Average Powered by BIP!
more_vert Bulletin of Mathemat... arrow_drop_down Bulletin of Mathematical BiologyArticle . 2022 . Peer-reviewedLicense: Springer TDMData sources: Crossrefadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1007/s11538-022-01067-7&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article 2021 SpainPublisher:Frontiers Media SA Funded by:EC | HARVESTEC| HARVESTAuthors: Gallois, Sandrine; Henry, Amanda G.;What present-day foragers do for their living and what they eat have long been privileged areas for exploring human behavior, global health, and human evolution. While many studies have focused on hunting and meat acquisition, less attention has been given to gathering and plant foods. Despite evidence of variation in both nutritional quality and energetic costs of gathering different plants, the overall effort spent on gathering in relation to other subsistence tasks is still under explored. In the current context of economic, climate, and social changes, many forager societies also rely on other subsistence strategies, including agriculture and wage labor. In this study, we aim to explore the place of gathering in the livelihood of a mixed economy society, the Baka forager-horticulturalists of southeastern Cameroon, by comparing the involvement and the costs of activities related to food acquisition. From a pool of 153 adult participants (97 women and 56 men), we collected 246 daily records using a GPS (Global Positioning System) tracker combined with heart rate monitor and time allocation recalls. We compared the duration, distance traveled, and the intensity of work, measured by calculating the metabolic equivalent of task (MET), of subsistence activities related to food acquisition. Results from this work show that gathering activities, performed by both women and men, are energetically costly, with higher MET values than hunting and fishing activities. Furthermore, the MET values vary depending on the targeted plant foods. We discuss these insights in the overall framework of subsistence patterns, merging them with the socio-cultural and environmental factors that might explain Baka livelihood and subsistence strategy.
Frontiers in Ecology... arrow_drop_down Frontiers in Ecology and EvolutionArticle . 2021 . Peer-reviewedLicense: CC BYData sources: CrossrefDiposit Digital de Documents de la UABArticle . 2021License: CC BYData sources: Diposit Digital de Documents de la UABadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3389/fevo.2021.768003&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess RoutesGreen gold 11 citations 11 popularity Top 10% influence Average impulse Top 10% Powered by BIP!
more_vert Frontiers in Ecology... arrow_drop_down Frontiers in Ecology and EvolutionArticle . 2021 . Peer-reviewedLicense: CC BYData sources: CrossrefDiposit Digital de Documents de la UABArticle . 2021License: CC BYData sources: Diposit Digital de Documents de la UABadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3389/fevo.2021.768003&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article , Journal 2021Embargo end date: 23 Feb 2021 Switzerland, United StatesPublisher:Springer Science and Business Media LLC Funded by:NSF | Collaborative Research: ..., NSF | Belmont Forum Collaborati...NSF| Collaborative Research: Combining NEON and remotely sensed habitats to determine climate impacts on community dynamics ,NSF| Belmont Forum Collaborative Research: Scenarios of Biodiversity and Ecosystem ServiceOrrin Myers; Georges Kunstler; Jalene M. LaMontagne; James A. Lutz; Istem Fer; Jordan Luongo; Renata Poulton-Kamakura; Janneke HilleRisLambers; Yassine Messaoud; Sam Pearse; Gregory S. Gilbert; Natalie L. Cleavitt; C. D. Reid; Inés Ibáñez; Michael A. Steele; Miranda D. Redmond; Susan L. Cohen; Jerry F. Franklin; Benoît Courbaud; Don C. Bragg; Ethan Ready; C. Lane Scher; Andreas P. Wion; William H. Schlesinger; Shubhi Sharma; Robert R. Parmenter; Amanda M. Schwantes; Scott M. Pearson; Thomas G. Whitham; Thomas T. Veblen; Christopher L. Kilner; Samantha Sutton; Chase L. Nuñez; Emily V. Moran; Nathan L. Stephenson; Adrian J. Das; Jennifer J. Swenson; Cathryn H. Greenberg; Roman Zlotin; James S. Clark; James S. Clark; Walter D. Koenig; Robert A. Andrus; Amy V. Whipple; Jill F. Johnstone; Eliot J. B. McIntire; Kyle C. Rodman; Timothy J. Fahey; Erin Shanahan; Jonathan Myers; Johannes M. H. Knops; Catherine A. Gehring; Diana Macias; Qinfeng Guo; Christopher M. Moore; Michael Dietze; Mélaine Aubry-Kientz; Dale G. Brockway; Michał Bogdziewicz; Kai Zhu; Yves Bergeron; Robert Daley; Margaret Swift; Kristin Legg;pmc: PMC7902660
AbstractIndirect climate effects on tree fecundity that come through variation in size and growth (climate-condition interactions) are not currently part of models used to predict future forests. Trends in species abundances predicted from meta-analyses and species distribution models will be misleading if they depend on the conditions of individuals. Here we find from a synthesis of tree species in North America that climate-condition interactions dominate responses through two pathways, i) effects of growth that depend on climate, and ii) effects of climate that depend on tree size. Because tree fecundity first increases and then declines with size, climate change that stimulates growth promotes a shift of small trees to more fecund sizes, but the opposite can be true for large sizes. Change the depresses growth also affects fecundity. We find a biogeographic divide, with these interactions reducing fecundity in the West and increasing it in the East. Continental-scale responses of these forests are thus driven largely by indirect effects, recommending management for climate change that considers multiple demographic rates.
Nature Communication... arrow_drop_down add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1038/s41467-020-20836-3&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess RoutesGreen gold 59 citations 59 popularity Top 1% influence Top 10% impulse Top 1% Powered by BIP!
more_vert Nature Communication... arrow_drop_down add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1038/s41467-020-20836-3&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article , Conference object , Other literature type , Journal 2021Embargo end date: 01 Dec 2021Publisher:Cold Spring Harbor Laboratory Funded by:NSERC, CIHR, SNSF | The road less travelled: ...NSERC ,CIHR ,SNSF| The road less travelled: Parasites as models for unconventional protein secretion at the host-pathogen interfaceCarmen Faso; Dayana E. Salas-Leiva; Joel B. Dacks; Joel B. Dacks; Adrian B. Hehl; Andrew J. Roger; Erina A. Balmer; Rui Santos; Shweta V. Pipaliya; Corina Wirdnam;pmid: 34446013
pmc: PMC8394649
ABSTRACTComparing a parasitic lineage to its free-living relatives is a powerful way to understand how the evolutionary transition to parasitism occurred.Giardia intestinalis(Fornicata) is a leading cause of gastrointestinal disease world-wide and is famous for its unusual complement of cellular compartments, such as having peripheral vacuoles instead of typical endosomal compartments. Endocytosis plays an important role inGiardia’s pathogenesis. Endosomal sorting complexes required for transport (ESCRT) are membrane-deforming proteins associated with the late endosome/multivesicular body (MVB). MVBs are ill-defined inG. intestinalisand roles for identified ESCRT-related proteins are not fully understood in the context of its unique endocytic system. Furthermore, components thought to be required for full ESCRT functionality have not yet been documented in this species.We used genomic and transcriptomic data from several Fornicata species to clarify the evolutionary genome streamlining observed inGiardia, as well as to detect any divergent orthologs of the Fornicata ESCRT subunits. We observed differences in the ESCRT machinery complement betweenGiardiastrains. Microscopy-based investigations of key components of ESCRT machinery such asGiVPS36andGiVPS25 link them to peripheral vacuoles, highlighting these organelles as simplified MVB equivalents. Unexpectedly, we show ESCRT components associated with the Endoplasmic Reticulum, and for the first time, mitosomes. Finally, we identified the rare ESCRT component CHMP7 in several fornicate representatives, includingGiardia, and show that contrary to current understanding, CHMP7 evolved from a gene fusion of VPS25 and SNF7 domains, prior to the last eukaryotic common ancestor, over 1.5 billion years ago. Our findings show that ESCRT machinery inG. intestinalisis far more varied and complete than previously thought, and associating to multiple cellular locations and presenting changes in ESCRT complement which pre-date adoption of a parasitic lifestyle.
https://boris.unibe.... arrow_drop_down add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1101/2021.02.11.430673&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess RoutesGreen gold 10 citations 10 popularity Top 10% influence Average impulse Top 10% Powered by BIP!
more_vert https://boris.unibe.... arrow_drop_down add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1101/2021.02.11.430673&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article 2022Publisher:MDPI AG Authors: Francesco Crupi;To contribute to the debate on climate-proof urban regeneration, the illustrated study seeks to understand how the provision of new multiscalar, multidimensional, and integrated planning tools based on sustainable and resilient strategies can guarantee high levels of urban, environmental, and energy efficiency and quality, as well as circularity of resources, counteracting the effects deriving from climate change. Starting from some regulatory and design references that integrate a new ecologically oriented city model into the planning of urban projects, the contribution identifies in the construction of green and blue infrastructures (GI) new design metaphors capable of improving biodiversity; favoring ecological and energy transition; restoring the quality of the air, water, and soil environmental matrices with natural solutions; and making cities truly inclusive, sustainable, and resilient. The methodology adopted for the design of the “Acilia–Madonnetta” Urban and Metropolitan Centrality in the Municipality of Rome simulates a planning process for part of the X Municipality by applying an iterative and interscalar logic, an articulation of levels and phases with the aim of prefiguring the construction of a GI characterized by new ecological-environmental and functional endowments strictly related to the promotion of an efficient, smart, and green city. The contribution highlights the potential and limits of the proposed experimentation, relating both to the quality and innovation of design solutions and possible evolutionary lines and to the lack of clear institutional governance that is limiting the implementation of projects.
add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3390/urbansci6030056&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess Routesgold 7 citations 7 popularity Top 10% influence Average impulse Top 10% Powered by BIP!
more_vert add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3390/urbansci6030056&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article 2022Publisher:MDPI AG Funded by:EC | REWINDEC| REWINDMattia Colacicco; Cosetta Ciliberti; Gennaro Agrimi; Antonino Biundo; Isabella Pisano;doi: 10.3390/en15145217
The yeast Yarrowia lipolytica is an industrially relevant microorganism, which is able to convert low-value wastes into different high-value, bio-based products, such as enzymes, lipids, and other important metabolites. Waste cooking oil (WCO) represents one of the main streams generated in the food supply chain, especially from the domestic sector. The need to avoid its incorrect disposal makes this waste a resource for developing bioprocesses in the perspective of a circular bioeconomy. To this end, the strain Y. lipolytica W29 was used as a platform for the simultaneous production of intracellular lipids and extracellular lipases. Three different minimal media conditions with different pH controls were utilized in a small-scale (50 mL final volume) screening strategy, and the best condition was tested for an up-scaling procedure in higher volumes (800 mL) by selecting the best-performing possibility. The tested media were constituted by YNB media with high nitrogen restriction (1 g L−1 (NH4)2SO4) and different carbon sources (3% w v−1 glucose and 10% v v−1 WCO) with different levels of pH controls. Lipase production and SCO content were analyzed. A direct correlation was found between decreasing FFA availability in the media and increasing SCO levels and lipase activity. The simultaneous production of extracellular lipase (1.164 ± 0.025 U mL−1) and intracellular single-cell oil accumulation by Y. lipolytica W29 growing on WCO demonstrates the potential and the industrial relevance of this biorefinery model.
add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3390/en15145217&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess Routesgold 9 citations 9 popularity Top 10% influence Average impulse Top 10% Powered by BIP!
more_vert add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3390/en15145217&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article 2022Publisher:MDPI AG Funded by:EC | FACADE, EC | InnoRenew CoEEC| FACADE ,EC| InnoRenew CoELaetitia Marrot; Kristine Meile; Mariem Zouari; David DeVallance; Anna Sandak; Rene Herrera;This study aims to characterize and valorize hemp residual biomass by a slow pyrolysis process. The volatile by-products of hemp carbonization were characterized by several methods (TGA, UV-VIS, TLC, Flash Prep-LC, UHPLC, QTOF-MS) to understand the pyrolysis reaction mechanisms and to identify the chemical products produced during the process. The obtained carbon yield was 29%, generating a gaseous stream composed of phenols and furans which was collected in four temperature ranges (F1 at 20–150 °C, F2 at 150–250 °C, F3 at 250–400 °C and F4 at 400–1000 °C). The obtained liquid fractions were separated into subfractions by flash chromatography. The total phenolic content (TPC) varied depending on the fraction but did not correlate with an increase in temperature or with a decrease in pH value. Compounds present in fractions F1, F3 and F4, being mainly phenolic molecules such as guaiacyl or syringyl derivatives issued from the lignin degradation, exhibit antioxidant capacity. The temperature of the pyrolysis process was positively correlated with detectable phenolic content, which can be explained by the decomposition order of the hemp chemical constituents. A detailed understanding of the chemical composition of pyrolysis products of hemp residuals allows for an assessment of their potential valorization routes and the future economic potential of underutilized biomass.
Molecules arrow_drop_down Recolector de Ciencia Abierta, RECOLECTAArticle . 2022License: CC BYData sources: Recolector de Ciencia Abierta, RECOLECTAadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3390/molecules27092794&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess RoutesGreen gold 3 citations 3 popularity Average influence Average impulse Average Powered by BIP!
visibility 19visibility views 19 download downloads 27 Powered bymore_vert Molecules arrow_drop_down Recolector de Ciencia Abierta, RECOLECTAArticle . 2022License: CC BYData sources: Recolector de Ciencia Abierta, RECOLECTAadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
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For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article 2024Publisher:MDPI AG Authors: Bekri Xhemali; Davide Giovanardi; Enrico Biondi; Emilio Stefani;The seed industry plays a crucial role in global food production but it faces a persistent challenge in ensuring the health and quality of seeds, particularly those of tomato and pepper seeds, which represent key seed commodities on the global market. Seeds can serve as potential pathways for the introduction and dissemination of seed-borne bacteria, which may have devastating effects on crop yield, farmers’ remunerability, and food security. Therefore, fungicides and other antimicrobial compounds are extensively used to disinfect the seeds, thus increasing the input of chemicals in the agri-environment. In this review, we address aspects that connect disease epidemiology with seed infection and health, including seed contamination, endophytic colonization, and seed-borne infections. We focused on the main bacterial diseases affecting tomato and pepper seeds by discussing their official seed testing methods as requirements supporting a smooth seed trade. Moreover, we present a survey on the past and recent innovations for seed treatments, focusing on sustainable disinfection methods. Therefore, this review will be a short but indispensable guide for seed technologists and pathologists involved in the production of high-quality seeds, providing indications and suggestions to contrast seed-borne pathogen dissemination and avoid international controversies and complaints by phytosanitary authorities, extension services, and farmers.
Sustainability arrow_drop_down https://doi.org/10.20944/prepr...Article . 2024 . Peer-reviewedLicense: CC BYData sources: Crossrefadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
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For further information contact us at helpdesk@openaire.eu1 citations 1 popularity Average influence Average impulse Average Powered by BIP!
more_vert Sustainability arrow_drop_down https://doi.org/10.20944/prepr...Article . 2024 . Peer-reviewedLicense: CC BYData sources: Crossrefadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3390/su16051808&type=result"></script>'); --> </script>
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description Publicationkeyboard_double_arrow_right Article , Other literature type 2024Publisher:Springer Science and Business Media LLC Funded by:UKRI | BBSRC IAA University of G..., WT | Socio-ecological dynamics...UKRI| BBSRC IAA University of Glasgow ,WT| Socio-ecological dynamics of zoonotic and vector-borne diseases in changing landscapes: implications for surveillance and controlFedra Trujillano; G. Jiménez; Luis Edgar Tarazona-Manrique; Najat F. Kahamba; Fredros O. Okumu; Nombre Apollinaire; Gabriel Carrasco-Escobar; Brian Barrett; Kimberly Fornace;Abstract Background In the near future, the incidence of mosquito-borne diseases may expand to new sites due to changes in temperature and rainfall patterns caused by climate change. Therefore, there is a need to use recent technological advances to improve vector surveillance methodologies. Unoccupied Aerial Vehicles (UAVs), often called drones, have been used to collect high-resolution imagery to map detailed information on mosquito habitats and direct control measures to specific areas. Supervised classification approaches have been largely used to automatically detect vector habitats. However, manual data labelling for model training limits their use for rapid responses. Open-source foundation models such as the Meta AI Segment Anything Model (SAM) can facilitate the manual digitalization of high-resolution images. This pre-trained model can assist in extracting features of interest in a diverse range of images. Here, we evaluated the performance of SAM through the Samgeo package, a Python-based wrapper for geospatial data, as it has not been applied to analyse remote sensing images for epidemiological studies. Results We tested the identification of two land cover classes of interest: water bodies and human settlements, using different UAV acquired imagery across five malaria-endemic areas in Africa, South America, and Southeast Asia. We employed manually placed point prompts and text prompts associated with specific classes of interest to guide the image segmentation and assessed the performance in the different geographic contexts. An average Dice coefficient value of 0.67 was obtained for buildings segmentation and 0.73 for water bodies using point prompts. Regarding the use of text prompts, the highest Dice coefficient value reached 0.72 for buildings and 0.70 for water bodies. Nevertheless, the performance was closely dependent on each object, landscape characteristics and selected words, resulting in varying performance. Conclusions Recent models such as SAM can potentially assist manual digitalization of imagery by vector control programs, quickly identifying key features when surveying an area of interest. However, accurate segmentation still requires user-provided manual prompts and corrections to obtain precise segmentation. Further evaluations are necessary, especially for applications in rural areas.
International Journa... arrow_drop_down International Journal of Health GeographicsArticle . 2024 . Peer-reviewedLicense: CC BYData sources: Crossrefadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1186/s12942-024-00371-w&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eu1 citations 1 popularity Average influence Average impulse Average Powered by BIP!
more_vert International Journa... arrow_drop_down International Journal of Health GeographicsArticle . 2024 . Peer-reviewedLicense: CC BYData sources: Crossrefadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
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For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article , Journal 2021 United KingdomPublisher:Elsevier BV Authors: Claudio Fuentes Grunewald; Claudio Grunewald; Jose Gayo Pelaez; Vanessa Ndovela; +3 AuthorsClaudio Fuentes Grunewald; Claudio Grunewald; Jose Gayo Pelaez; Vanessa Ndovela; Ellie Wood; Rahul Kapoore; Carole Llewellyn;pmid: 33181476
Implementing a circular economy aimed at reusing resources is becoming increasingly important for industry. Microalgae fit within a circular economy by being able to bioremediate nutrient waste and as a source of biomass for several commercial applications. Here, we report a novel validation of a circular economy concept using microalgae at a relevant industrial scale with a new two-phase process. During the first phase biomass was grown autotrophically, biomass was then concentrated using membrane technology for the second phase where mixotrophic conditions were applied to boost growth further. Microalgae cultures were able to grow (13.8 g/L), uptake and bioremediate nutrients (Nitrogen > 134 mg/L/day) from an anaerobic digestion side-stream (digestate), obtaining high quality microalgae biomass (>45% protein content) suitable for use as animal feed, closing the circular economy loop for industrial applications.
add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1016/j.biortech.2020.124349&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess RoutesGreen bronze 40 citations 40 popularity Top 10% influence Average impulse Top 1% Powered by BIP!
more_vert add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1016/j.biortech.2020.124349&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article 2022Publisher:Springer Science and Business Media LLC Authors: Sudeshna, Mondal; Guruprasad, Samanta; Manuel, De la Sen;pmid: 36085428
In theoretical ecology, recent field experiments on terrestrial vertebrates observe that the predator-prey interaction can not only be curtailed by direct consumption but also governed by some indirect effects such as the fear of predator which may reduce the reproduction rate of prey individuals. Based on this fact, we have developed and explored the predator-prey interaction with the influence of both cost and benefit of fear effect (felt by prey). A Holling type III functional response with the effect of habitat complexity has been taken to consume the prey biomass. Positivity and boundedness of the studied system prove that the model is well-behaved. The uniform persistence of the studied system is derived analytically under some parametric restrictions. The feasibility conditions and stability criteria of each equilibrium points have been discussed. Next, we have exhibited the existence of Hopf-bifurcation around the interior equilibrium point. Our mathematical analyses show that habitat complexity and fear effect both have a great impact on the persistence of the predator biomass. Furthermore, we have investigated the effect of breeding delay parameter such that the system loses its stability behaviour and enters into a limit cycle oscillations through Hopf-bifurcation. Numerical simulations are illustrated to verify our analytical outcomes. Numerically, we have perturbed the death rates of prey and predator species with Gaussian white noise terms due to the effects of environmental fluctuations.
Bulletin of Mathemat... arrow_drop_down Bulletin of Mathematical BiologyArticle . 2022 . Peer-reviewedLicense: Springer TDMData sources: Crossrefadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1007/s11538-022-01067-7&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess Routesbronze 3 citations 3 popularity Top 10% influence Average impulse Average Powered by BIP!
more_vert Bulletin of Mathemat... arrow_drop_down Bulletin of Mathematical BiologyArticle . 2022 . Peer-reviewedLicense: Springer TDMData sources: Crossrefadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1007/s11538-022-01067-7&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article 2021 SpainPublisher:Frontiers Media SA Funded by:EC | HARVESTEC| HARVESTAuthors: Gallois, Sandrine; Henry, Amanda G.;What present-day foragers do for their living and what they eat have long been privileged areas for exploring human behavior, global health, and human evolution. While many studies have focused on hunting and meat acquisition, less attention has been given to gathering and plant foods. Despite evidence of variation in both nutritional quality and energetic costs of gathering different plants, the overall effort spent on gathering in relation to other subsistence tasks is still under explored. In the current context of economic, climate, and social changes, many forager societies also rely on other subsistence strategies, including agriculture and wage labor. In this study, we aim to explore the place of gathering in the livelihood of a mixed economy society, the Baka forager-horticulturalists of southeastern Cameroon, by comparing the involvement and the costs of activities related to food acquisition. From a pool of 153 adult participants (97 women and 56 men), we collected 246 daily records using a GPS (Global Positioning System) tracker combined with heart rate monitor and time allocation recalls. We compared the duration, distance traveled, and the intensity of work, measured by calculating the metabolic equivalent of task (MET), of subsistence activities related to food acquisition. Results from this work show that gathering activities, performed by both women and men, are energetically costly, with higher MET values than hunting and fishing activities. Furthermore, the MET values vary depending on the targeted plant foods. We discuss these insights in the overall framework of subsistence patterns, merging them with the socio-cultural and environmental factors that might explain Baka livelihood and subsistence strategy.
Frontiers in Ecology... arrow_drop_down Frontiers in Ecology and EvolutionArticle . 2021 . Peer-reviewedLicense: CC BYData sources: CrossrefDiposit Digital de Documents de la UABArticle . 2021License: CC BYData sources: Diposit Digital de Documents de la UABadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3389/fevo.2021.768003&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess RoutesGreen gold 11 citations 11 popularity Top 10% influence Average impulse Top 10% Powered by BIP!
more_vert Frontiers in Ecology... arrow_drop_down Frontiers in Ecology and EvolutionArticle . 2021 . Peer-reviewedLicense: CC BYData sources: CrossrefDiposit Digital de Documents de la UABArticle . 2021License: CC BYData sources: Diposit Digital de Documents de la UABadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3389/fevo.2021.768003&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article , Journal 2021Embargo end date: 23 Feb 2021 Switzerland, United StatesPublisher:Springer Science and Business Media LLC Funded by:NSF | Collaborative Research: ..., NSF | Belmont Forum Collaborati...NSF| Collaborative Research: Combining NEON and remotely sensed habitats to determine climate impacts on community dynamics ,NSF| Belmont Forum Collaborative Research: Scenarios of Biodiversity and Ecosystem ServiceOrrin Myers; Georges Kunstler; Jalene M. LaMontagne; James A. Lutz; Istem Fer; Jordan Luongo; Renata Poulton-Kamakura; Janneke HilleRisLambers; Yassine Messaoud; Sam Pearse; Gregory S. Gilbert; Natalie L. Cleavitt; C. D. Reid; Inés Ibáñez; Michael A. Steele; Miranda D. Redmond; Susan L. Cohen; Jerry F. Franklin; Benoît Courbaud; Don C. Bragg; Ethan Ready; C. Lane Scher; Andreas P. Wion; William H. Schlesinger; Shubhi Sharma; Robert R. Parmenter; Amanda M. Schwantes; Scott M. Pearson; Thomas G. Whitham; Thomas T. Veblen; Christopher L. Kilner; Samantha Sutton; Chase L. Nuñez; Emily V. Moran; Nathan L. Stephenson; Adrian J. Das; Jennifer J. Swenson; Cathryn H. Greenberg; Roman Zlotin; James S. Clark; James S. Clark; Walter D. Koenig; Robert A. Andrus; Amy V. Whipple; Jill F. Johnstone; Eliot J. B. McIntire; Kyle C. Rodman; Timothy J. Fahey; Erin Shanahan; Jonathan Myers; Johannes M. H. Knops; Catherine A. Gehring; Diana Macias; Qinfeng Guo; Christopher M. Moore; Michael Dietze; Mélaine Aubry-Kientz; Dale G. Brockway; Michał Bogdziewicz; Kai Zhu; Yves Bergeron; Robert Daley; Margaret Swift; Kristin Legg;pmc: PMC7902660
AbstractIndirect climate effects on tree fecundity that come through variation in size and growth (climate-condition interactions) are not currently part of models used to predict future forests. Trends in species abundances predicted from meta-analyses and species distribution models will be misleading if they depend on the conditions of individuals. Here we find from a synthesis of tree species in North America that climate-condition interactions dominate responses through two pathways, i) effects of growth that depend on climate, and ii) effects of climate that depend on tree size. Because tree fecundity first increases and then declines with size, climate change that stimulates growth promotes a shift of small trees to more fecund sizes, but the opposite can be true for large sizes. Change the depresses growth also affects fecundity. We find a biogeographic divide, with these interactions reducing fecundity in the West and increasing it in the East. Continental-scale responses of these forests are thus driven largely by indirect effects, recommending management for climate change that considers multiple demographic rates.
Nature Communication... arrow_drop_down add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1038/s41467-020-20836-3&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess RoutesGreen gold 59 citations 59 popularity Top 1% influence Top 10% impulse Top 1% Powered by BIP!
more_vert Nature Communication... arrow_drop_down add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1038/s41467-020-20836-3&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article , Conference object , Other literature type , Journal 2021Embargo end date: 01 Dec 2021Publisher:Cold Spring Harbor Laboratory Funded by:NSERC, CIHR, SNSF | The road less travelled: ...NSERC ,CIHR ,SNSF| The road less travelled: Parasites as models for unconventional protein secretion at the host-pathogen interfaceCarmen Faso; Dayana E. Salas-Leiva; Joel B. Dacks; Joel B. Dacks; Adrian B. Hehl; Andrew J. Roger; Erina A. Balmer; Rui Santos; Shweta V. Pipaliya; Corina Wirdnam;pmid: 34446013
pmc: PMC8394649
ABSTRACTComparing a parasitic lineage to its free-living relatives is a powerful way to understand how the evolutionary transition to parasitism occurred.Giardia intestinalis(Fornicata) is a leading cause of gastrointestinal disease world-wide and is famous for its unusual complement of cellular compartments, such as having peripheral vacuoles instead of typical endosomal compartments. Endocytosis plays an important role inGiardia’s pathogenesis. Endosomal sorting complexes required for transport (ESCRT) are membrane-deforming proteins associated with the late endosome/multivesicular body (MVB). MVBs are ill-defined inG. intestinalisand roles for identified ESCRT-related proteins are not fully understood in the context of its unique endocytic system. Furthermore, components thought to be required for full ESCRT functionality have not yet been documented in this species.We used genomic and transcriptomic data from several Fornicata species to clarify the evolutionary genome streamlining observed inGiardia, as well as to detect any divergent orthologs of the Fornicata ESCRT subunits. We observed differences in the ESCRT machinery complement betweenGiardiastrains. Microscopy-based investigations of key components of ESCRT machinery such asGiVPS36andGiVPS25 link them to peripheral vacuoles, highlighting these organelles as simplified MVB equivalents. Unexpectedly, we show ESCRT components associated with the Endoplasmic Reticulum, and for the first time, mitosomes. Finally, we identified the rare ESCRT component CHMP7 in several fornicate representatives, includingGiardia, and show that contrary to current understanding, CHMP7 evolved from a gene fusion of VPS25 and SNF7 domains, prior to the last eukaryotic common ancestor, over 1.5 billion years ago. Our findings show that ESCRT machinery inG. intestinalisis far more varied and complete than previously thought, and associating to multiple cellular locations and presenting changes in ESCRT complement which pre-date adoption of a parasitic lifestyle.
https://boris.unibe.... arrow_drop_down add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1101/2021.02.11.430673&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess RoutesGreen gold 10 citations 10 popularity Top 10% influence Average impulse Top 10% Powered by BIP!
more_vert https://boris.unibe.... arrow_drop_down add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1101/2021.02.11.430673&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article 2022Publisher:MDPI AG Authors: Francesco Crupi;To contribute to the debate on climate-proof urban regeneration, the illustrated study seeks to understand how the provision of new multiscalar, multidimensional, and integrated planning tools based on sustainable and resilient strategies can guarantee high levels of urban, environmental, and energy efficiency and quality, as well as circularity of resources, counteracting the effects deriving from climate change. Starting from some regulatory and design references that integrate a new ecologically oriented city model into the planning of urban projects, the contribution identifies in the construction of green and blue infrastructures (GI) new design metaphors capable of improving biodiversity; favoring ecological and energy transition; restoring the quality of the air, water, and soil environmental matrices with natural solutions; and making cities truly inclusive, sustainable, and resilient. The methodology adopted for the design of the “Acilia–Madonnetta” Urban and Metropolitan Centrality in the Municipality of Rome simulates a planning process for part of the X Municipality by applying an iterative and interscalar logic, an articulation of levels and phases with the aim of prefiguring the construction of a GI characterized by new ecological-environmental and functional endowments strictly related to the promotion of an efficient, smart, and green city. The contribution highlights the potential and limits of the proposed experimentation, relating both to the quality and innovation of design solutions and possible evolutionary lines and to the lack of clear institutional governance that is limiting the implementation of projects.
add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3390/urbansci6030056&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess Routesgold 7 citations 7 popularity Top 10% influence Average impulse Top 10% Powered by BIP!
more_vert add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3390/urbansci6030056&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article 2022Publisher:MDPI AG Funded by:EC | REWINDEC| REWINDMattia Colacicco; Cosetta Ciliberti; Gennaro Agrimi; Antonino Biundo; Isabella Pisano;doi: 10.3390/en15145217
The yeast Yarrowia lipolytica is an industrially relevant microorganism, which is able to convert low-value wastes into different high-value, bio-based products, such as enzymes, lipids, and other important metabolites. Waste cooking oil (WCO) represents one of the main streams generated in the food supply chain, especially from the domestic sector. The need to avoid its incorrect disposal makes this waste a resource for developing bioprocesses in the perspective of a circular bioeconomy. To this end, the strain Y. lipolytica W29 was used as a platform for the simultaneous production of intracellular lipids and extracellular lipases. Three different minimal media conditions with different pH controls were utilized in a small-scale (50 mL final volume) screening strategy, and the best condition was tested for an up-scaling procedure in higher volumes (800 mL) by selecting the best-performing possibility. The tested media were constituted by YNB media with high nitrogen restriction (1 g L−1 (NH4)2SO4) and different carbon sources (3% w v−1 glucose and 10% v v−1 WCO) with different levels of pH controls. Lipase production and SCO content were analyzed. A direct correlation was found between decreasing FFA availability in the media and increasing SCO levels and lipase activity. The simultaneous production of extracellular lipase (1.164 ± 0.025 U mL−1) and intracellular single-cell oil accumulation by Y. lipolytica W29 growing on WCO demonstrates the potential and the industrial relevance of this biorefinery model.
add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3390/en15145217&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess Routesgold 9 citations 9 popularity Top 10% influence Average impulse Top 10% Powered by BIP!
more_vert add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3390/en15145217&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article 2022Publisher:MDPI AG Funded by:EC | FACADE, EC | InnoRenew CoEEC| FACADE ,EC| InnoRenew CoELaetitia Marrot; Kristine Meile; Mariem Zouari; David DeVallance; Anna Sandak; Rene Herrera;This study aims to characterize and valorize hemp residual biomass by a slow pyrolysis process. The volatile by-products of hemp carbonization were characterized by several methods (TGA, UV-VIS, TLC, Flash Prep-LC, UHPLC, QTOF-MS) to understand the pyrolysis reaction mechanisms and to identify the chemical products produced during the process. The obtained carbon yield was 29%, generating a gaseous stream composed of phenols and furans which was collected in four temperature ranges (F1 at 20–150 °C, F2 at 150–250 °C, F3 at 250–400 °C and F4 at 400–1000 °C). The obtained liquid fractions were separated into subfractions by flash chromatography. The total phenolic content (TPC) varied depending on the fraction but did not correlate with an increase in temperature or with a decrease in pH value. Compounds present in fractions F1, F3 and F4, being mainly phenolic molecules such as guaiacyl or syringyl derivatives issued from the lignin degradation, exhibit antioxidant capacity. The temperature of the pyrolysis process was positively correlated with detectable phenolic content, which can be explained by the decomposition order of the hemp chemical constituents. A detailed understanding of the chemical composition of pyrolysis products of hemp residuals allows for an assessment of their potential valorization routes and the future economic potential of underutilized biomass.
Molecules arrow_drop_down Recolector de Ciencia Abierta, RECOLECTAArticle . 2022License: CC BYData sources: Recolector de Ciencia Abierta, RECOLECTAadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3390/molecules27092794&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess RoutesGreen gold 3 citations 3 popularity Average influence Average impulse Average Powered by BIP!
visibility 19visibility views 19 download downloads 27 Powered bymore_vert Molecules arrow_drop_down Recolector de Ciencia Abierta, RECOLECTAArticle . 2022License: CC BYData sources: Recolector de Ciencia Abierta, RECOLECTAadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3390/molecules27092794&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article 2024Publisher:MDPI AG Authors: Bekri Xhemali; Davide Giovanardi; Enrico Biondi; Emilio Stefani;The seed industry plays a crucial role in global food production but it faces a persistent challenge in ensuring the health and quality of seeds, particularly those of tomato and pepper seeds, which represent key seed commodities on the global market. Seeds can serve as potential pathways for the introduction and dissemination of seed-borne bacteria, which may have devastating effects on crop yield, farmers’ remunerability, and food security. Therefore, fungicides and other antimicrobial compounds are extensively used to disinfect the seeds, thus increasing the input of chemicals in the agri-environment. In this review, we address aspects that connect disease epidemiology with seed infection and health, including seed contamination, endophytic colonization, and seed-borne infections. We focused on the main bacterial diseases affecting tomato and pepper seeds by discussing their official seed testing methods as requirements supporting a smooth seed trade. Moreover, we present a survey on the past and recent innovations for seed treatments, focusing on sustainable disinfection methods. Therefore, this review will be a short but indispensable guide for seed technologists and pathologists involved in the production of high-quality seeds, providing indications and suggestions to contrast seed-borne pathogen dissemination and avoid international controversies and complaints by phytosanitary authorities, extension services, and farmers.
Sustainability arrow_drop_down https://doi.org/10.20944/prepr...Article . 2024 . Peer-reviewedLicense: CC BYData sources: Crossrefadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3390/su16051808&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eu1 citations 1 popularity Average influence Average impulse Average Powered by BIP!
more_vert Sustainability arrow_drop_down https://doi.org/10.20944/prepr...Article . 2024 . Peer-reviewedLicense: CC BYData sources: Crossrefadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.3390/su16051808&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eu