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Project: Coupled Model Intercomparison Project Phase 6 (CMIP6) datasets - These data have been generated as part of the internationally-coordinated Coupled Model Intercomparison Project Phase 6 (CMIP6; see also GMD Special Issue: http://www.geosci-model-dev.net/special_issue590.html). The simulation data provides a basis for climate research designed to answer fundamental science questions and serves as resource for authors of the Sixth Assessment Report of the Intergovernmental Panel on Climate Change (IPCC-AR6). CMIP6 is a project coordinated by the Working Group on Coupled Modelling (WGCM) as part of the World Climate Research Programme (WCRP). Phase 6 builds on previous phases executed under the leadership of the Program for Climate Model Diagnosis and Intercomparison (PCMDI) and relies on the Earth System Grid Federation (ESGF) and the Centre for Environmental Data Analysis (CEDA) along with numerous related activities for implementation. The original data is hosted and partially replicated on a federated collection of data nodes, and most of the data relied on by the IPCC is being archived for long-term preservation at the IPCC Data Distribution Centre (IPCC DDC) hosted by the German Climate Computing Center (DKRZ). The project includes simulations from about 120 global climate models and around 45 institutions and organizations worldwide. Summary: These data include the subset used by IPCC AR6 WGI authors of the datasets originally published in ESGF for 'CMIP6.CMIP.MOHC.HadGEM3-GC31-MM.historical' with the full Data Reference Syntax following the template 'mip_era.activity_id.institution_id.source_id.experiment_id.member_id.table_id.variable_id.grid_label.version'. The HadGEM3-GC3.1-N216ORCA025 climate model, released in 2016, includes the following components: aerosol: UKCA-GLOMAP-mode, atmos: MetUM-HadGEM3-GA7.1 (N216; 432 x 324 longitude/latitude; 85 levels; top level 85 km), land: JULES-HadGEM3-GL7.1, ocean: NEMO-HadGEM3-GO6.0 (eORCA025 tripolar primarily 0.25 deg; 1440 x 1205 longitude/latitude; 75 levels; top grid cell 0-1 m), seaIce: CICE-HadGEM3-GSI8 (eORCA025 tripolar primarily 0.25 deg; 1440 x 1205 longitude/latitude). The model was run by the Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK (MOHC) in native nominal resolutions: aerosol: 100 km, atmos: 100 km, land: 100 km, ocean: 25 km, seaIce: 25 km.

These data record the results of processing otter trawl catches (OTSB14; Merrett & Marshall, 1980) from the National Oceanography Centre (NOC, UK) long-term study of the Porcupine Abyssal Plain (PAP), including the PAP-Sustained Observatory time-series. The data concern catches recovered during the RRS Challenger cruise 135 in 1997. Billett, D.S.M. et al. (1998). RRS Challenger Cruise 135, 15 Oct-30 Oct 1997. BENGAL: High resolution temporal and spatial study of the BENthic biology and Geochemistry of a north-eastern Atlantic abyssal Locality. Southampton Oceanography Centre Cruise Report, No. 19, 49pp.| https://www.bodc.ac.uk/resources/inventories/cruise_inventory/reports/ch135_97.pdf

Complete replication data and code for article "A Meta-Analysis of Country Level Studies on Environmental Change and Migration". The rdata file contains both the meta and country level data. The data is also saved separately as xlsx files.

Model inputs, model code and aggregated model outputs (seasonal, annual) for every grassland field simulated (2017-2018) in "Myrgiotis et al. The carbon budget of the managed grasslands of Great Britain - informed by earth observations, Biogeosciences, 2022". Input files include (1) climate data (sitecode_M.npy) and (2) satellite based observations of Leaf Area Index (sitecode_O.pkl). Model code written in fortran. Model outputs (i.e. carbon pools, fluxes and balance for 2017 and 2018) aggregated annually (annual_outputs.csv) and monthly (annual_outputs.csv).

Dataset for the journal paper "Towards Active Buildings: rating grid-servicing buildings", which describes the simulations for the 20 case study buildings. The simulation inputs describe the intended characteristics as part of the early design stage process, and the outputs the performance metrics under the rating system introduced in the journal paper, called the ABCode1. Such outputs rate the relative merits of each case study in terms of embodied carbon, energy requirements, energy generation and energy flexibility. The simulation outputs have been generated using the inputs included in the dataset, which were then simulated in David Coley’s ZEBRA and then evaluated with the rating system proposed in the journal publication as part of ABCode1. The files are in the original Excel xlsx file (Microsoft Office 365), but it may be viewed by any other spread sheet tools such as LibreOffice's Calc.

3D scans of two prototypes digitally fabricated using automated robotic concrete spraying. Computed deviation of the thickness achieved compared to that which was designed is included.

Tree cores were sampled using increment borers. At each site three trees were chosen for coring, with two or three cores taken per tree. Cores were sanded and ring widths measured based on high-resolution images of the sanded cores. Cores were cross-dated and summary statistics used to compare cross-dating accuracy. The dataset contains the resulting dated ring width series. This dataset includes tree ring width data, derived from tree cores, that were sampled from sites across the Rhön Biosphere Reserve (Germany). At each chosen site three trees were cored, with two or three cores taken per cored tree. Data was collected in August 2021.

Origin of the data: Experimental spectroscopic measurements Data Type: experimental measurements, open access supporting information The data are in CSV, DSW and FBSW format. Supporting information are supplied in PDF format. Data generated by instruments: Varian Cary 5E-UV-Vis-NIR spectrophotometer for UV-Vis measurements, Varian Cary Eclipse fluorescence spectrophotomer for fluorescence quenching measurements. Analytical and procedural information: Stern-Volmer fluorescence quenching experiments, UV-Vis measurements and Fluorescent Quantum Yield determination via ferrioxalate actinometry. Definition of variables: Wavelength, Absorbance, Concentration Units of measurement: nanometers (nm), moles-per-litre (mol/l) Abbreviations: File names and data headers use the following abbreviations: FQY refers to Fluorescence Quantum Yield determination experiments Light refers to irradiated samples in the actinometry experiment, as detailed in the procedure in the supporting information. Dark refers to non-irradiated samples in the actinometry experiment, as detailed in the procedure in the supporting information. SVQuench refers to Stern-Volmer quenching experiments RAxx refer to measurements related to allylbenzene. Xx is the amount of quencher in mol/l (05 should be intended as 0.5 mol/l and so on). RTxx refer to measurements related to S-(4-methylphenyl) 4-methylbenzenethiosulfonate. Xx is the amount of quencher in mol/l as above. RExx refer to measurements related to 1,2-dimethoxy-4-(prop-2-en-1-yl)benzene. Xx is the amount of quencher in mol/l as above. RSxx refer to measurements related to styrene. Xx is the amount of quencher in mol/l. RTFxx refer to measurements related to S-(4-fluorophenyl) 4-fluorobenzenethiosulfonate. Xx is the amount of quencher in mol/l as above. MesAcrMe Xx refers to data related to catalyst 9-mesityl-10-methylacridinium. Xx is the amount of catalyst in mol/l as above. DMC for measurements employing dimethylcarbonate as solvent. ACN for measurements employing acetonitrile as solvent. FBSW and DSW data are used by the proprietary software of the Varian spectrometers (CARY WinUV and Cary Eclipse). Information can be found at https://www.agilent.com/en/product/molecular-spectroscopy/uv-vis-uv-vis-nir-spectroscopy/uv-vis-uv-vis-nir-software/cary-winuv-software and https://www.agilent.com/en/product/molecular-spectroscopy/fluorescence-spectroscopy/fluorescence-software/cary-eclipse-software

As part of global efforts to reduce dependence on carbon-based energy sources there has been a rapid increase in the installation of renewable energy devices. The installation and operation of these devices can result in conflicts with wildlife. In the marine environment, mammals may avoid wind farms that are under construction or operating. Such avoidance may lead to more time spent travelling or displacement from key habitats. A paucity of data on at-sea movements of marine mammals around wind farms limits our understanding of the nature of their potential impacts. Here, we present the results of a telemetry study on harbour seals Phoca vitulina in The Wash, south-east England, an area where wind farms are being constructed using impact pile driving. We investigated whether seals avoid wind farms during operation, construction in its entirety, or during piling activity. The study was carried out using historical telemetry data collected prior to any wind farm development and telemetry data collected in 2012 during the construction of one wind farm and the operation of another. Within an operational wind farm, there was a close-to-significant increase in seal usage compared to prior to wind farm development. However, the wind farm was at the edge of a large area of increased usage, so the presence of the wind farm was unlikely to be the cause. There was no significant displacement during construction as a whole. However, during piling, seal usage (abundance) was significantly reduced up to 25 km from the piling activity; within 25 km of the centre of the wind farm, there was a 19 to 83% (95% confidence intervals) decrease in usage compared to during breaks in piling, equating to a mean estimated displacement of 440 individuals. This amounts to significant displacement starting from predicted received levels of between 166 and 178 dB re 1 μPa(p-p). Displacement was limited to piling activity; within 2 h of cessation of pile driving, seals were distributed as per the non-piling scenario. Synthesis and applications. Our spatial and temporal quantification of avoidance of wind farms by harbour seals is critical to reduce uncertainty and increase robustness in environmental impact assessments of future developments. Specifically, the results will allow policymakers to produce industry guidance on the likelihood of displacement of seals in response to pile driving; the relationship between sound levels and avoidance rates; and the duration of any avoidance, thus allowing far more accurate environmental assessments to be carried out during the consenting process. Further, our results can be used to inform mitigation strategies in terms of both the sound levels likely to cause displacement and what temporal patterns of piling would minimize the magnitude of the energetic impacts of displacement. Wash_diagWash_diag.xlsx is the historic location data (pre windfarm construction) for the 19 individuals used in the analysis described in Russell et al.

Here, we investigate how stochasticity and age-dependence in energy dynamics influence maternal allocation in iteroparous females. We develop a state-dependent model to calculate the optimal maternal allocation strategy with respect to maternal age and energy reserves, focusing on allocation in a single offspring at a time. We introduce stochasticity in energetic costs– in terms of the amount of energy required to forage successfully and individual differences in metabolism – and in feeding success. We systematically assess how allocation is influenced by age-dependence in energetic costs, feeding success, energy intake per successful feeding attempt, and environmentally-driven mortality. First, using stochastic dynamic programming, we calculate the optimal amount of reserves M that mothers allocate to each offspring depending on their own reserves R and age A. The optimal life history strategy is then the set of allocation decisions M(R, A) over the whole lifespan which maximizes the total reproductive success of distant descendants. Second, we simulated the life histories of 1000 mothers following the optimisation strategy and the reserves at the start of adulthood R1, the distribution of which was determined, the distribution of which was determined using an iterative procedure as described . For each individual, we calculated maternal allocation Mt, maternal reserves Rt, and relative allocation Mt⁄Rt at each time period t. The relative allocation helps us to understand how resources are partitioned between mother and offspring. Third, we consider how the optimal strategy varies when there is age-dependence in resource acquisition, energetic costs and survival. Specifically, we include varying scenarios with an age-dependent increase or a decrease with age in energetic costs (c_t), feeding success (q_t), energy intake per successful feeding attempt (y_t), and environmentally-driven extrinsic mortality rate (d_t) (Table 2). We consider the age-dependence of parameters one at a time or in pairs, altering the slope, intercept, or asymptote of the age-dependence (linear or asymptotic function). Our aim is to identify whether the observed reproductive senescence can arise from optimal maternal allocation. As such, we do not impose a decline in selection in later life as all offspring are equally valuable at all ages (for a given maternal allocation), and there are no mutations. For each scenario, we run the backward iteration process with these age-dependent functions, obtain the allocation strategy, and simulate the life history of 1000 individuals based on the novel strategy. We then fit quadratic and linear models to the reproduction of these 1000 individuals using the lme function, nlme package in R. For these models, the response variable is the maternal allocation Mt and explanatory variables are the time period t and t2 (for the quadratic fit only), with individual identity as a random term. We use likelihood ratio tests to compare linear and quadratic models using the anova function (package nlme) with the maximum-likelihood method. If the comparison is significant (p-value <0.05), we considered the quadratic model to have a better fit, otherwise the linear model is considered more parsimonious. We were particularly interested in identifying scenarios where the fit was quadratic with a negative quadratic term. For each scenario, the pseudo R2 conditional value (proportion of variance explained by the fixed and random terms, accounting for individual identity) is calculated to assess the goodness-of-fit of the lme model, on a scale from 0 to 1, using the “r.squared” function, package gabtool. All calculations and coding are done in R. Iteroparous parents face a trade-off between allocating current resources to reproduction versus maximizing survival to produce further offspring. Optimal allocation varies across age, and follows a hump-shaped pattern across diverse taxa, including mammals, birds and invertebrates. This non-linear allocation pattern lacks a general theoretical explanation, potentially because most studies focus on offspring number rather than quality and do not incorporate uncertainty or age-dependence in energy intake or costs. Here, we develop a life history model of maternal allocation in iteroparous animals. We identify the optimal allocation strategy in response to stochasticity when energetic costs, feeding success, energy intake, and environmentally-driven mortality risk are age-dependent. As a case study, we use tsetse, a viviparous insect that produces one offspring per reproductive attempt and relies on an uncertain food supply of vertebrate blood. Diverse scenarios generate a hump-shaped allocation: when energetic costs and energy intake increase with age; and also when energy intake decreases, and energetic costs increase or decrease. Feeding success and mortality risk have little influence on age-dependence in allocation. We conclude that ubiquitous evidence for age-dependence in these influential traits can explain the prevalence of non-linear maternal allocation across diverse taxonomic groups.