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Methane emissions from aquatic and terrestrial ecosystems play a crucial role in global warming, which is particularly affecting high-latitude ecosystems. As major contributors to methane emissions in natural environments, the microbial communities involved in methane production and oxidation deserve a special attention. Microbial diversity and activity are expected to be strongly affected by the already observed (and further predicted) temperature increase in high-latitude ecosystems, eventually resulting in disrupted feedback methane emissions. The METHANOBASE project has been designed to investigate the intricate relations between microbial diversity and methane emissions in Arctic, Subarctic and Subantarctic ecosystems, under natural (baseline) conditions and in response to simulated temperature increments. We report here a small subunit ribosomal RNA (16S rRNA) analysis of lake, peatland and mineral soil ecosystems.

Project: IPCC Data Distribution Centre : Supplementary data sets for the Sixth Assessment Report - For the Sixth Assessment Report of the IPCC (AR6) input/source and intermediate datasets underlying the AR6 were collected and long-term archived. This project compliments CMIP6 data subset and snapshot analyzed for the WGI AR6. Summary: This data set contains detailed elements the sea level projections associated with the Intergovernmental Panel on Climate Change Sixth Assessment Report. In particular, it contains relative sea level projections that exclude the background term (representing primarily land subsidence or uplift). It includes probability distributions for all the workflows described in AR6 WGI 9.6.3.2. P-boxes derived from these distributions are available in the sister entry 'IPCC-DDC_AR6_Sup_PBox'. These data may be of use for users who want to substitute their own estimates of the background term. Regional projections can also be accessed through the NASA/IPCC Sea Level Projections Tool at https://sealevel.nasa.gov/ipcc-ar6-sea-level-projection-tool. See https://zenodo.org/communities/ipcc-ar6-sea-level-projections for additional related data sets.

Indicators of economic sustainability obtained for the 8 systems of LTS studied. Monoc. = monoculture; sub-trop. = subtropical; IMTA = integrated multi trophic aquaculture; “-“ = no data.

The purpose of this study, Controversial Facilities in Japan, 1955 – 1995, is to understand the factors which lead decision-makers and authorities in Japan to select localities as host communities for often-unwanted and controversial facilities such as nuclear power plants, dams, and airports. Such projects regularly cause Not In My Back Yard, or NIMBY, responses from local residents around the world. <br /><br /> The dataset contains observations on approximately 500 Japanese cities, towns, and villages covering the period from 1955 through 1995. Data was collected through archival research, interviews with anti-facility activists and officials, and surveys of relevant government offices throughout Japan.<br /><br /> Variables assessed include the number of siting attempts and successes in the locality, the town’s location in Japan by prefecture and by political district code alongside batte ries of information on demographic, socioeconomic, and political factors. Demographic information includes sex ratios in the locality over time along with percentage of elderly in the population. Socioeconomic status was examined through measures of primary, secondary, and tertiary sector workforces over time along with variables on the coastal, mid-range, and deep sea fishing cooperatives (where applicable). Political variables include district magnitude, presence or absence of a prime minister from locally elected representatives, number of long-term Liberal Democratic Party (LDP) representatives, and the number of members of the town council and their political party. Additional political variables include the numbers and percentage of representatives from all major political parties in the national legislature, political party of the mayor, and measures of over-time support from the area for the long-dominant Liberal Democratic Party. The dataset contains publicly-available information on compensation provided to communities along with information on eminent domain use. Subject: STANDARD DEPOSIT TERMS 1.0 Type: DATAPASS:TERMS:STANDARD:1.0 Notes: This study was deposited under the of the Data-PASS standard deposit terms. A copy of the usage agreement is included in the file section of this study.;

EXport Processes in the Ocean from Remote Sensing (EXPORTS) is a large-scale NASA-led field campaign that will provide critical information for quantifying the export and fate of upper ocean net primary production (NPP) using satellite observations and state of the art ocean technologies. The goal of EXPORTS is to understand how the organic carbon makes it to the twilight zone and deep ocean interior, and how lon it stays there, which is vital to understanding present and future ocean ecosystems and global climate. Oceanographic data acquired during the EXPORTS Cruise (29SG20210503) on board the Research Vessel Sarmiento de Gamboa in 2021.

Salmonids are of immense socio-economic importance in much of the world but are threatened by climate change. This has generated a substantial literature documenting effects of climate variation on salmonid productivity in freshwater ecosystems, but there has been no global quantitative synthesis across studies. We conducted a systematic review and meta-analysis to gain quantitative insight into key factors shaping the effects of climate on salmonid productivity, ultimately collecting 1,321 correlations from 156 studies, representing 23 species across 24 countries. Fisher’s Z was used as the standardized effect size, and a series of weighted mixed-effects models were compared to identify covariates that best explained variation in effects. Patterns in climate effects were complex, and were driven by spatial (latitude, elevation), temporal (time-period, age-class), and biological (range, habitat type, anadromy) variation within and among study populations. These trends were often consistent with predictions based on salmonid thermal tolerances. Namely, warming and decreased precipitation tended to reduce productivity when high temperatures challenged upper thermal limits, while opposite patterns were common when cold temperatures limited productivity. Overall, variable climate impacts on salmonids suggest that future declines in some locations may be counterbalanced by gains in others. In particular, we suggest that future warming should (1) increase salmonid productivity at high latitudes and elevations (especially >60° and >1,500m), (2) reduce productivity in populations experiencing hotter and dryer growing season conditions, (3) favor non-native over native salmonids, and (4) impact lentic populations less negatively than lotic ones. These patterns should help conservation and management organizations identify populations most vulnerable to climate change, which can then be prioritized for protective measures. Our framework enables broad inferences about future productivity that can inform decision-making under climate change for salmonids and other taxa, but more widespread, standardized, and hypothesis-driven research is needed to expand current knowledge. See README document and R code. See README document.

Recent geomorphic evidence from the inner shelf and shoreface to the east of Long Island's barrier island system indicates that reworking of glacial outwash deposits at the inner shelf-shoreface transition, as sea level rises, may be supplying much of the sediment needed to maintain barrier islands to the west. A conceptual model describing sediment dispersal from outwash source areas was developed from this hypothesis. It was reasoned that outwash sediments ranging from silts to coarse gravels would be subject to differential transport paths across and along the shoreface upon reworking. Coarser grain sizes would move onshore toward the intertidal beach, whereas finer sediments would move offshore. Sand of intermediate grain size would be concentrated in the surf zone an move alongshore in wave-generated longshore currents. To test this model, 400 samples from the beach and shoreface of Long Island were analyzed for grain-size frequency distribution and each grain-size class was examined for frequency of occurrence in the cross-shore and alongshore directions. On a spatially averaged basis, grain-size classes displayed peak abundance in specific zones across the shoreface as predicted by the model, but alongshore trends could not be recognized among the "noisy" data. Therefore, empirical orthogonal functions (EOF) were used to examine uncorrelated (orthogonal) modes of variability in the occurrence of each grain-size class in the alongshore direction. The first function, representing more than 60% of the variability among the data, showed that grain sizes subject to longshore transport in the surf zone i crease in frequency in the alongshore direction relative to coarser grain sizes. Results also show that peak concentrations of coarse sediments correspond to zones subject to frequent overwashing. It is concluded that EOF analysis of individual grain-size classes holds promise for extracting trends from noisy data sets. End_of_Article - Last_Page 318------------

Species distribution models (SDMs) are becoming an important tool for marine conservation and management. Yet while there is an increasing diversity and volume of marine biodiversity data for training SDMs, little practical guidance is available on how to leverage distinct data types to build robust models. We explored the effect of different data types on the fit, performance and predictive ability of SDMs by comparing models trained with four data types for a heavily exploited pelagic fish, the blue shark (Prionace glauca), in the Northwest Atlantic: two fishery-dependent (conventional mark-recapture tags, fisheries observer records) and two fishery-independent (satellite-linked electronic tags, pop-up archival tags). We found that all four data types can result in robust models, but differences among spatial predictions highlighted the need to consider ecological realism in model selection and interpretation regardless of data type. Differences among models were primarily attributed to biases in how each data type, and the associated representation of absences, sampled the environment and summarized the resulting species distributions. Outputs from model ensembles and a model trained on all pooled data both proved effective for combining inferences across data types and provided more ecologically realistic predictions than individual models. Our results provide valuable guidance for practitioners developing SDMs. With increasing access to diverse data sources, future work should further develop truly integrative modeling approaches that can explicitly leverage strengths of individual data types while statistically accounting for limitations, such as sampling biases.  Please see the README document ("README.md") and the accompanying published article: Braun, C. D., M. C. Arostegui, N. Farchadi, M. Alexander, P. Afonso, A. Allyn, S. J. Bograd, S. Brodie, D. P. Crear, E. F. Culhane, T. H. Curtis, E. L. Hazen, A. Kerney, N. Lezama-Ochoa, K. E. Mills, D. Pugh, N. Queiroz, J. D. Scott, G. B. Skomal, D. W. Sims, S. R. Thorrold, H. Welch, R. Young-Morse, R. Lewison. In press. Building use-inspired species distribution models: using multiple data types to examine and improve model performance. Ecological Applications. Accepted. DOI: < article DOI will be added when it is assigned >

Whether marine fish will grow differently in future high pCO2 environments remains surprisingly uncertain. Long-term and whole-life cycle effects are particularly unknown, because such experiments are logistically challenging, space demanding, exclude long-lived species, and require controlled, restricted feeding regimes—otherwise increased consumption could mask potential growth effects. Here, we report on repeated, long-term, food-controlled experiments to rear large populations (>4,000 individuals total) of the experimental model and ecologically important forage fish Menidia menidia (Atlantic silverside) under contrasting temperature (17°, 24°, and 28°C) and pCO2 conditions (450 vs. 2,200 μatm) from fertilization to a third of this annual species' life span. Quantile analyses of trait distributions showed mostly negative effects of high pCO2 on long-term growth. At 17°C and 28°C, but not at 24°C, high pCO2 fish were significantly shorter [17°C: -5 to -9%; 28°C: -3%] and weighed less [17°C: -6 to -18%; 28°C: -8%] compared to ambient pCO2 fish. Reductions in fish weight were smaller than in length, which is why high pCO2 fish at 17°C consistently exhibited a higher Fulton's k (weight/length ratio). Notably, it took more than 100 days of rearing for statistically significant length differences to emerge between treatment populations, showing that cumulative, long-term CO2 effects could exist elsewhere but are easily missed by short experiments. Long-term rearing had another benefit: it allowed sexing the surviving fish, thereby enabling rare sex-specific analyses of trait distributions under contrasting CO2 environments. We found that female silversides grew faster than males, but there was no interaction between CO2 and sex, indicating that males and females were similarly affected by high pCO2. Because Atlantic silversides are known to exhibit temperature-dependent sex determination, we also analyzed sex ratios, revealing no evidence for CO2-dependent sex determination in this species. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2020) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-12-25.