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description Publicationkeyboard_double_arrow_right Article , Other literature type , Journal 2013 Germany, France, France, France, FrancePublisher:Public Library of Science (PLoS) Herbert Siegel; Gaute Lavik; Carolin R. Löscher; Harald Schunck; Harald Schunck; Markus Schilhabel; Dhwani K. Desai; Dhwani K. Desai; Sergio Contreras; Sergio Contreras; Marcel M. M. Kuypers; Philip Rosenstiel; Ruth A. Schmitz; Tobias Großkopf; Tobias Großkopf; Moritz Holtappels; Tim Kalvelage; Michelle Graco; Julie LaRoche; Julie LaRoche; Aurélien Paulmier;In Eastern Boundary Upwelling Systems nutrient-rich waters are transported to the ocean surface, fuelling high photoautotrophic primary production. Subsequent heterotrophic decomposition of the produced biomass increases the oxygen-depletion at intermediate water depths, which can result in the formation of oxygen minimum zones (OMZ). OMZs can sporadically accumulate hydrogen sulfide (H2S), which is toxic to most multicellular organisms and has been implicated in massive fish kills. During a cruise to the OMZ off Peru in January 2009 we found a sulfidic plume in continental shelf waters, covering an area >5500 km(2), which contained ∼2.2×10(4) tons of H2S. This was the first time that H2S was measured in the Peruvian OMZ and with ∼440 km(3) the largest plume ever reported for oceanic waters. We assessed the phylogenetic and functional diversity of the inhabiting microbial community by high-throughput sequencing of DNA and RNA, while its metabolic activity was determined with rate measurements of carbon fixation and nitrogen transformation processes. The waters were dominated by several distinct γ-, δ- and ε-proteobacterial taxa associated with either sulfur oxidation or sulfate reduction. Our results suggest that these chemolithoautotrophic bacteria utilized several oxidants (oxygen, nitrate, nitrite, nitric oxide and nitrous oxide) to detoxify the sulfidic waters well below the oxic surface. The chemolithoautotrophic activity at our sampling site led to high rates of dark carbon fixation. Assuming that these chemolithoautotrophic rates were maintained throughout the sulfidic waters, they could be representing as much as ∼30% of the photoautotrophic carbon fixation. Postulated changes such as eutrophication and global warming, which lead to an expansion and intensification of OMZs, might also increase the frequency of sulfidic waters. We suggest that the chemolithoautotrophically fixed carbon may be involved in a negative feedback loop that could fuel further sulfate reduction and potentially stabilize the sulfidic OMZ waters.
OceanRep arrow_drop_down INRIA a CCSD electronic archive serverArticle . 2013Data sources: INRIA a CCSD electronic archive serverInstitut national des sciences de l'Univers: HAL-INSUArticle . 2013Full-Text: https://hal.science/hal-00998673Data sources: Bielefeld Academic Search Engine (BASE)INRIA a CCSD electronic archive serverArticle . 2013 . Peer-reviewedData sources: INRIA a CCSD electronic archive serverINRIA a CCSD electronic archive serverArticle . 2013Data sources: INRIA a CCSD electronic archive serveradd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
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For further information contact us at helpdesk@openaire.eumore_vert OceanRep arrow_drop_down INRIA a CCSD electronic archive serverArticle . 2013Data sources: INRIA a CCSD electronic archive serverInstitut national des sciences de l'Univers: HAL-INSUArticle . 2013Full-Text: https://hal.science/hal-00998673Data sources: Bielefeld Academic Search Engine (BASE)INRIA a CCSD electronic archive serverArticle . 2013 . Peer-reviewedData sources: INRIA a CCSD electronic archive serverINRIA a CCSD electronic archive serverArticle . 2013Data sources: INRIA a CCSD electronic archive serveradd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1371/journal.pone.0068661&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article , Journal 2019 DenmarkPublisher:Journal of Marine Research/Yale Canfield, Donald E.; Kraft, Beate; Löscher, Carolin; Boyle, Richard; Thamdrup, Bo; Stewart, Frank J.;The Bay of Bengal hosts persistent, measurable, but sub-micromolar, concentrations of oxygen in its oxygen-minimum zone (OMZ). Such low-oxygen conditions are not necessarily rare in the global ocean and seem also to characterize the OMZ of the Pescadero Basin in the Gulf of California, as well as the outer edges of otherwise anoxic OMZs, such as can be found, for example, in the Eastern Tropical North Pacific. We show here that biological controls on oxygen consumption are required to allow the semistable persistence of low-oxygen conditions in OMZ settings; otherwise, only small changes in physical mixing or rates of primary production would drive the OMZ between anoxic and oxic states with potentially large swings in oxygen concentration. We propose that two controls are active: an oxygen-dependent control on oxygen respiration and an oxygen inhibition of denitrification. These controls, working alone and together, can generate low-oxygen concentrations over a wide variability in ocean mixing parameters. More broadly, we discuss the oxygen regulation of organic matter cycling and N2 production in OMZ settings. Modern biogeochemical models of nitrogen and oxygen cycling in OMZ settings do contain some of the parameterizations that we explore here. However, these models have not been applied to understanding the persistence of low, but measurable, concentrations of oxygen in settings like the Bay of Bengal, nor have they been applied to understanding what biological/physical processes control the transition from a weakly oxygenated state to a “functionally” anoxic state with implications for nitrogen cycling. Therefore, we believe that the approach here illuminates the relationship between oxygen and the biogeochemical cycling of carbon and nitrogen in settings like the Bay of Bengal. Furthermore, we believe that our results could further inform large-scale ocean models seeking to explore how global warming might influence the spread of low-oxygen waters, influencing the cycles of oxygen, carbon, and nitrogen in OMZ settings.
University of Southe... arrow_drop_down University of Southern Denmark Research OutputArticle . 2019Data sources: University of Southern Denmark Research OutputJournal of Marine ResearchArticle . 2019Data sources: University of Southern Denmark Research Outputadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1357/002224019828410548&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eumore_vert University of Southe... arrow_drop_down University of Southern Denmark Research OutputArticle . 2019Data sources: University of Southern Denmark Research OutputJournal of Marine ResearchArticle . 2019Data sources: University of Southern Denmark Research Outputadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1357/002224019828410548&type=result"></script>'); --> </script>
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description Publicationkeyboard_double_arrow_right Article , Other literature type , Journal 2013 Germany, France, France, France, FrancePublisher:Public Library of Science (PLoS) Herbert Siegel; Gaute Lavik; Carolin R. Löscher; Harald Schunck; Harald Schunck; Markus Schilhabel; Dhwani K. Desai; Dhwani K. Desai; Sergio Contreras; Sergio Contreras; Marcel M. M. Kuypers; Philip Rosenstiel; Ruth A. Schmitz; Tobias Großkopf; Tobias Großkopf; Moritz Holtappels; Tim Kalvelage; Michelle Graco; Julie LaRoche; Julie LaRoche; Aurélien Paulmier;In Eastern Boundary Upwelling Systems nutrient-rich waters are transported to the ocean surface, fuelling high photoautotrophic primary production. Subsequent heterotrophic decomposition of the produced biomass increases the oxygen-depletion at intermediate water depths, which can result in the formation of oxygen minimum zones (OMZ). OMZs can sporadically accumulate hydrogen sulfide (H2S), which is toxic to most multicellular organisms and has been implicated in massive fish kills. During a cruise to the OMZ off Peru in January 2009 we found a sulfidic plume in continental shelf waters, covering an area >5500 km(2), which contained ∼2.2×10(4) tons of H2S. This was the first time that H2S was measured in the Peruvian OMZ and with ∼440 km(3) the largest plume ever reported for oceanic waters. We assessed the phylogenetic and functional diversity of the inhabiting microbial community by high-throughput sequencing of DNA and RNA, while its metabolic activity was determined with rate measurements of carbon fixation and nitrogen transformation processes. The waters were dominated by several distinct γ-, δ- and ε-proteobacterial taxa associated with either sulfur oxidation or sulfate reduction. Our results suggest that these chemolithoautotrophic bacteria utilized several oxidants (oxygen, nitrate, nitrite, nitric oxide and nitrous oxide) to detoxify the sulfidic waters well below the oxic surface. The chemolithoautotrophic activity at our sampling site led to high rates of dark carbon fixation. Assuming that these chemolithoautotrophic rates were maintained throughout the sulfidic waters, they could be representing as much as ∼30% of the photoautotrophic carbon fixation. Postulated changes such as eutrophication and global warming, which lead to an expansion and intensification of OMZs, might also increase the frequency of sulfidic waters. We suggest that the chemolithoautotrophically fixed carbon may be involved in a negative feedback loop that could fuel further sulfate reduction and potentially stabilize the sulfidic OMZ waters.
OceanRep arrow_drop_down INRIA a CCSD electronic archive serverArticle . 2013Data sources: INRIA a CCSD electronic archive serverInstitut national des sciences de l'Univers: HAL-INSUArticle . 2013Full-Text: https://hal.science/hal-00998673Data sources: Bielefeld Academic Search Engine (BASE)INRIA a CCSD electronic archive serverArticle . 2013 . Peer-reviewedData sources: INRIA a CCSD electronic archive serverINRIA a CCSD electronic archive serverArticle . 2013Data sources: INRIA a CCSD electronic archive serveradd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1371/journal.pone.0068661&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eumore_vert OceanRep arrow_drop_down INRIA a CCSD electronic archive serverArticle . 2013Data sources: INRIA a CCSD electronic archive serverInstitut national des sciences de l'Univers: HAL-INSUArticle . 2013Full-Text: https://hal.science/hal-00998673Data sources: Bielefeld Academic Search Engine (BASE)INRIA a CCSD electronic archive serverArticle . 2013 . Peer-reviewedData sources: INRIA a CCSD electronic archive serverINRIA a CCSD electronic archive serverArticle . 2013Data sources: INRIA a CCSD electronic archive serveradd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1371/journal.pone.0068661&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article , Journal 2019 DenmarkPublisher:Journal of Marine Research/Yale Canfield, Donald E.; Kraft, Beate; Löscher, Carolin; Boyle, Richard; Thamdrup, Bo; Stewart, Frank J.;The Bay of Bengal hosts persistent, measurable, but sub-micromolar, concentrations of oxygen in its oxygen-minimum zone (OMZ). Such low-oxygen conditions are not necessarily rare in the global ocean and seem also to characterize the OMZ of the Pescadero Basin in the Gulf of California, as well as the outer edges of otherwise anoxic OMZs, such as can be found, for example, in the Eastern Tropical North Pacific. We show here that biological controls on oxygen consumption are required to allow the semistable persistence of low-oxygen conditions in OMZ settings; otherwise, only small changes in physical mixing or rates of primary production would drive the OMZ between anoxic and oxic states with potentially large swings in oxygen concentration. We propose that two controls are active: an oxygen-dependent control on oxygen respiration and an oxygen inhibition of denitrification. These controls, working alone and together, can generate low-oxygen concentrations over a wide variability in ocean mixing parameters. More broadly, we discuss the oxygen regulation of organic matter cycling and N2 production in OMZ settings. Modern biogeochemical models of nitrogen and oxygen cycling in OMZ settings do contain some of the parameterizations that we explore here. However, these models have not been applied to understanding the persistence of low, but measurable, concentrations of oxygen in settings like the Bay of Bengal, nor have they been applied to understanding what biological/physical processes control the transition from a weakly oxygenated state to a “functionally” anoxic state with implications for nitrogen cycling. Therefore, we believe that the approach here illuminates the relationship between oxygen and the biogeochemical cycling of carbon and nitrogen in settings like the Bay of Bengal. Furthermore, we believe that our results could further inform large-scale ocean models seeking to explore how global warming might influence the spread of low-oxygen waters, influencing the cycles of oxygen, carbon, and nitrogen in OMZ settings.
University of Southe... arrow_drop_down University of Southern Denmark Research OutputArticle . 2019Data sources: University of Southern Denmark Research OutputJournal of Marine ResearchArticle . 2019Data sources: University of Southern Denmark Research Outputadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1357/002224019828410548&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eumore_vert University of Southe... arrow_drop_down University of Southern Denmark Research OutputArticle . 2019Data sources: University of Southern Denmark Research OutputJournal of Marine ResearchArticle . 2019Data sources: University of Southern Denmark Research Outputadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1357/002224019828410548&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eu