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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Monica Borghi; Leonardo Perez de Souza; Takuya Yoshida; Alisdair R. Fernie;

    SummaryAdverse climatic conditions at the time of flowering severely hinder crop yields and threaten the interactions between plants and their pollinators. These features depend on a common trait: the metabolism of flowers. In this Viewpoint article, we aim to provide insight into the metabolic changes that occur in flowers in response to changes in climate and emphasize that these changes severely impact the fitness of autogamous and allogamous species, plant–pollinator interactions, and overall ecosystem health. We review the biochemical processes that lead to failure of gamete development and to alterations of color, scent and nectar secretion. Then, making use of open access expression data, we examine the expression of genes that may drive these changes in response to heat and drought. Finally, we present measurements of metabolites from flowers exposed to a heat wave and discuss how the results of this short‐term experiment may give rise to misleading conclusions regarding the positive effect of heat on flower fitness. We hope this article draws attention to this often‐neglected dynamic and its important consequences.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ New Phytologistarrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    New Phytologist
    Article
    Data sources: UnpayWall
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    MPG.PuRe
    Article . 2019
    Data sources: MPG.PuRe
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    New Phytologist
    Article . 2019 . Peer-reviewed
    License: Wiley Online Library User Agreement
    Data sources: Crossref
    New Phytologist
    Article . 2020
    addClaim

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    114
    citations114
    popularityTop 1%
    influenceTop 10%
    impulseTop 1%
    BIP!Powered by BIP!
    more_vert
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ New Phytologistarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      New Phytologist
      Article
      Data sources: UnpayWall
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      MPG.PuRe
      Article . 2019
      Data sources: MPG.PuRe
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      New Phytologist
      Article . 2019 . Peer-reviewed
      License: Wiley Online Library User Agreement
      Data sources: Crossref
      New Phytologist
      Article . 2020
      addClaim

      This Research product is the result of merged Research products in OpenAIRE.

      You have already added works in your ORCID record related to the merged Research product.
  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Monica Borghi; Leonardo Perez de Souza; Takuya Yoshida; Alisdair R. Fernie;

    SummaryAdverse climatic conditions at the time of flowering severely hinder crop yields and threaten the interactions between plants and their pollinators. These features depend on a common trait: the metabolism of flowers. In this Viewpoint article, we aim to provide insight into the metabolic changes that occur in flowers in response to changes in climate and emphasize that these changes severely impact the fitness of autogamous and allogamous species, plant–pollinator interactions, and overall ecosystem health. We review the biochemical processes that lead to failure of gamete development and to alterations of color, scent and nectar secretion. Then, making use of open access expression data, we examine the expression of genes that may drive these changes in response to heat and drought. Finally, we present measurements of metabolites from flowers exposed to a heat wave and discuss how the results of this short‐term experiment may give rise to misleading conclusions regarding the positive effect of heat on flower fitness. We hope this article draws attention to this often‐neglected dynamic and its important consequences.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ New Phytologistarrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    New Phytologist
    Article
    Data sources: UnpayWall
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    MPG.PuRe
    Article . 2019
    Data sources: MPG.PuRe
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    New Phytologist
    Article . 2019 . Peer-reviewed
    License: Wiley Online Library User Agreement
    Data sources: Crossref
    New Phytologist
    Article . 2020
    addClaim

    This Research product is the result of merged Research products in OpenAIRE.

    You have already added works in your ORCID record related to the merged Research product.
    114
    citations114
    popularityTop 1%
    influenceTop 10%
    impulseTop 1%
    BIP!Powered by BIP!
    more_vert
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ New Phytologistarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      New Phytologist
      Article
      Data sources: UnpayWall
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      MPG.PuRe
      Article . 2019
      Data sources: MPG.PuRe
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      New Phytologist
      Article . 2019 . Peer-reviewed
      License: Wiley Online Library User Agreement
      Data sources: Crossref
      New Phytologist
      Article . 2020
      addClaim

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      You have already added works in your ORCID record related to the merged Research product.
  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Toshihiro Obata; Toshihiro Obata; Mark Stitt; Nicole Krohn; +13 Authors

    Abstract Phytochrome photoreceptors are known to regulate plastic growth responses to vegetation shade. However, recent reports also suggest an important role for phytochromes in carbon resource management, metabolism, and growth. Here, we use 13CO2 labelling patterns in multiallele phy mutants to investigate the role of phytochrome in the control of metabolic fluxes. We also combine quantitative data of 13C incorporation into protein and cell wall polymers, gas exchange measurements, and system modelling to investigate why biomass is decreased in adult multiallele phy mutants. Phytochrome influences the synthesis of stress metabolites such as raffinose and proline, and the accumulation of sugars, possibly through regulating vacuolar sugar transport. Remarkably, despite their modified metabolism and vastly altered architecture, growth rates in adult phy mutants resemble those of wild-type plants. Our results point to delayed seedling growth and smaller cotyledon size as the cause of the adult-stage phy mutant biomass defect. Our data signify a role for phytochrome in metabolic stress physiology and carbon partitioning, and illustrate that phytochrome action at the seedling stage sets the trajectory for adult biomass production.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Journal of Experimen...arrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Journal of Experimental Botany
    Article . 2021 . Peer-reviewed
    License: OUP Standard Publication Reuse
    Data sources: Crossref
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Journal of Experimental Botany
    Article . 2021 . Peer-reviewed
    addClaim

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    Access Routes
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    hybrid
    7
    citations7
    popularityTop 10%
    influenceAverage
    impulseTop 10%
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Journal of Experimen...arrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      Journal of Experimental Botany
      Article . 2021 . Peer-reviewed
      License: OUP Standard Publication Reuse
      Data sources: Crossref
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      Journal of Experimental Botany
      Article . 2021 . Peer-reviewed
      addClaim

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Toshihiro Obata; Toshihiro Obata; Mark Stitt; Nicole Krohn; +13 Authors

    Abstract Phytochrome photoreceptors are known to regulate plastic growth responses to vegetation shade. However, recent reports also suggest an important role for phytochromes in carbon resource management, metabolism, and growth. Here, we use 13CO2 labelling patterns in multiallele phy mutants to investigate the role of phytochrome in the control of metabolic fluxes. We also combine quantitative data of 13C incorporation into protein and cell wall polymers, gas exchange measurements, and system modelling to investigate why biomass is decreased in adult multiallele phy mutants. Phytochrome influences the synthesis of stress metabolites such as raffinose and proline, and the accumulation of sugars, possibly through regulating vacuolar sugar transport. Remarkably, despite their modified metabolism and vastly altered architecture, growth rates in adult phy mutants resemble those of wild-type plants. Our results point to delayed seedling growth and smaller cotyledon size as the cause of the adult-stage phy mutant biomass defect. Our data signify a role for phytochrome in metabolic stress physiology and carbon partitioning, and illustrate that phytochrome action at the seedling stage sets the trajectory for adult biomass production.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Journal of Experimen...arrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Journal of Experimental Botany
    Article . 2021 . Peer-reviewed
    License: OUP Standard Publication Reuse
    Data sources: Crossref
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Journal of Experimental Botany
    Article . 2021 . Peer-reviewed
    addClaim

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    Access Routes
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    hybrid
    7
    citations7
    popularityTop 10%
    influenceAverage
    impulseTop 10%
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    more_vert
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Journal of Experimen...arrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      Journal of Experimental Botany
      Article . 2021 . Peer-reviewed
      License: OUP Standard Publication Reuse
      Data sources: Crossref
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      Journal of Experimental Botany
      Article . 2021 . Peer-reviewed
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Agustin Zsögön; Lázaro E. P. Peres; Yingjie Xiao; Jianbing Yan; +1 Authors

    SUMMARYGlobal agriculture is dominated by a handful of species that currently supply a huge proportion of our food and feed. It additionally faces the massive challenge of providing food for 10 billion people by 2050, despite increasing environmental deterioration. One way to better plan production in the face of current and continuing climate change is to better understand how our domestication of these crops included their adaptation to environments that were highly distinct from those of their centre of origin. There are many prominent examples of this, including the development of temperate Zea mays (maize) and the alteration of day‐length requirements in Solanum tuberosum (potato). Despite the pre‐eminence of some 15 crops, more than 50 000 species are edible, with 7000 of these considered semi‐cultivated. Opportunities afforded by next‐generation sequencing technologies alongside other methods, including metabolomics and high‐throughput phenotyping, are starting to contribute to a better characterization of a handful of these species. Moreover, the first examples of de novo domestication have appeared, whereby key target genes are modified in a wild species in order to confer predictable traits of agronomic value. Here, we review the scale of the challenge, drawing extensively on the characterization of past agriculture to suggest informed strategies upon which the breeding of future climate‐resilient crops can be based.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ The Plant Journalarrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    The Plant Journal
    Article . 2021 . Peer-reviewed
    License: CC BY NC
    Data sources: Crossref
    addClaim

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    80
    citations80
    popularityTop 1%
    influenceTop 10%
    impulseTop 1%
    BIP!Powered by BIP!
    more_vert
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ The Plant Journalarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      The Plant Journal
      Article . 2021 . Peer-reviewed
      License: CC BY NC
      Data sources: Crossref
      addClaim

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Agustin Zsögön; Lázaro E. P. Peres; Yingjie Xiao; Jianbing Yan; +1 Authors

    SUMMARYGlobal agriculture is dominated by a handful of species that currently supply a huge proportion of our food and feed. It additionally faces the massive challenge of providing food for 10 billion people by 2050, despite increasing environmental deterioration. One way to better plan production in the face of current and continuing climate change is to better understand how our domestication of these crops included their adaptation to environments that were highly distinct from those of their centre of origin. There are many prominent examples of this, including the development of temperate Zea mays (maize) and the alteration of day‐length requirements in Solanum tuberosum (potato). Despite the pre‐eminence of some 15 crops, more than 50 000 species are edible, with 7000 of these considered semi‐cultivated. Opportunities afforded by next‐generation sequencing technologies alongside other methods, including metabolomics and high‐throughput phenotyping, are starting to contribute to a better characterization of a handful of these species. Moreover, the first examples of de novo domestication have appeared, whereby key target genes are modified in a wild species in order to confer predictable traits of agronomic value. Here, we review the scale of the challenge, drawing extensively on the characterization of past agriculture to suggest informed strategies upon which the breeding of future climate‐resilient crops can be based.

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    The Plant Journal
    Article . 2021 . Peer-reviewed
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      The Plant Journal
      Article . 2021 . Peer-reviewed
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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Xiaohui Jiang; Weiyi Zhang; Alisdair R. Fernie; Weiwei Wen;

    SUMMARYHorticultural crops mainly include fruits, vegetables, ornamental trees and flowers, and tea trees (Melaleuca alternifolia). They produce a variety of nutrients for the daily human diet in addition to the nutrition provided by staple crops, and some of them additionally possess ornamental and medicinal features. As such, horticultural crops make unique and important contributions to both food security and a colorful lifestyle. Under the current climate change scenario, the growing population and limited arable land means that agriculture, and especially horticulture, has been facing unprecedented challenges to meet the diverse demands of human daily life. Breeding horticultural crops with high quality and adaptability and establishing an effective system that combines cultivation, post‐harvest handling, and sales becomes increasingly imperative for horticultural production. This review discusses characteristic and recent research highlights in horticultural crops, focusing on the breeding of quality traits and the mechanisms that underpin them. It additionally addresses challenges and potential solutions in horticultural production and post‐harvest practices. Finally, we provide a prospective as to how emerging technologies can be implemented alongside interdisciplinary basic research to enhance our understanding and exploitation of horticultural crops.

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    The Plant Journal
    Article . 2021 . Peer-reviewed
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      The Plant Journal
      Article . 2021 . Peer-reviewed
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    Authors: Xiaohui Jiang; Weiyi Zhang; Alisdair R. Fernie; Weiwei Wen;

    SUMMARYHorticultural crops mainly include fruits, vegetables, ornamental trees and flowers, and tea trees (Melaleuca alternifolia). They produce a variety of nutrients for the daily human diet in addition to the nutrition provided by staple crops, and some of them additionally possess ornamental and medicinal features. As such, horticultural crops make unique and important contributions to both food security and a colorful lifestyle. Under the current climate change scenario, the growing population and limited arable land means that agriculture, and especially horticulture, has been facing unprecedented challenges to meet the diverse demands of human daily life. Breeding horticultural crops with high quality and adaptability and establishing an effective system that combines cultivation, post‐harvest handling, and sales becomes increasingly imperative for horticultural production. This review discusses characteristic and recent research highlights in horticultural crops, focusing on the breeding of quality traits and the mechanisms that underpin them. It additionally addresses challenges and potential solutions in horticultural production and post‐harvest practices. Finally, we provide a prospective as to how emerging technologies can be implemented alongside interdisciplinary basic research to enhance our understanding and exploitation of horticultural crops.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao The Plant Journalarrow_drop_down
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    The Plant Journal
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      The Plant Journal
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    Authors: Marı́a Agustina Mazzella; María Inés Zanor; Alisdair R. Fernie; Jorge J. Casal;

    Dans les auvents clairsemés, les faibles ratios rouge à rouge foncé (R/FR) n'atteignent que les tiges orientées verticalement, qui répondent avec des taux d'extension plus rapides. Il est montré ici que ce signal favorise également l'accumulation de matière sèche de la tige dans le tournesol (Helianthus annuus) mais pas dans la moutarde (Sinapis alba L.). Le blocage physique de la croissance de l'extension entre les nœuds a également bloqué la récupération entre les nœuds du carbone marqué alimenté aux feuilles, ce qui indique que l'accumulation accrue de carbone est en partie une conséquence de la croissance accrue de l'extension chez le tournesol. Cependant, une faible R/FR a également favorisé l'accumulation de carbone dans la partie inférieure de l'entre-noeud, où la croissance de l'extension n'a pas été affectée. Bien que les niveaux de nombreux métabolites solubles et de glucides de la paroi cellulaire aient augmenté dans la tige en réponse à une faible R/FR, permettant la conservation de leur concentration, le saccharose était présent à une concentration plus faible sous une faible R/FR. Ce changement devrait favoriser le déchargement du carbone du phloème de la tige. Un faible R/FR a également réduit les niveaux d'acides gras, d'alcools d'acides gras et de stérols sélectionnés. Par rapport à la partie inférieure, la partie supérieure de l'entre-nœud présentait des niveaux plus élevés d'acides organiques, d'acides aminés, d'acides gras et de stérols. Il est conclu que la promotion de la croissance de l'extension de la tige par de faibles rapports R/FR entraîne une augmentation du gain de matière sèche dans les entre-nœuds de tournesol par un mécanisme largement indépendant des changements dans le métabolisme, car, bien que les faibles R/FR et l'ontogenèse modifient le profil métabolique, les changements ne sont pas corrélés avec les réponses de croissance observées. En las copas dispersas, las proporciones bajas de rojo a rojo lejano (R/FR) alcanzan solo los tallos orientados verticalmente, que responden con tasas de extensión más rápidas. Aquí se muestra que esta señal también promueve la acumulación de materia seca del tallo en el girasol (Helianthus annuus) pero no en la mostaza (Sinapis alba L.). El bloqueo físico del crecimiento de la extensión internodal también bloqueó la recuperación internodal del carbono etiquetado alimentado a las hojas, lo que indica que el aumento de la acumulación de carbono es en parte una consecuencia del aumento del crecimiento de la extensión en el girasol. Sin embargo, la baja R/FR también promovió la acumulación de carbono en la sección inferior del entrenudo, donde el crecimiento de la extensión no se vio afectado. Aunque los niveles de muchos metabolitos solubles y de carbohidratos de la pared celular aumentaron en el tallo en respuesta a una baja R/FR, lo que permitió conservar su concentración, la sacarosa estaba presente en una concentración más baja bajo una baja R/FR. Se prevé que este cambio favorezca la descarga de carbono del floema del tallo. El bajo R/FR también redujo los niveles de ácidos grasos, alcoholes de ácidos grasos y esteroles seleccionados. En comparación con la sección inferior, la sección superior del entrenudo mostró niveles más altos de ácidos orgánicos, aminoácidos, ácidos grasos y esteroles. Se concluye que la promoción del crecimiento de la extensión del tallo por bajas relaciones R/FR causa un aumento de la ganancia de materia seca en los entrenudos de girasol por un mecanismo que es en gran medida independiente de los cambios en el metabolismo, ya que, si bien tanto la baja R/FR como la ontogenia alteran el perfil metabólico, los cambios no se correlacionan con las respuestas de crecimiento observadas. In sparse canopies, low red to far-red (R/FR) ratios reach only vertically-oriented stems, which respond with faster rates of extension. It is shown here that this signal also promotes stem dry matter accumulation in sunflower (Helianthus annuus) but not in mustard (Sinapis alba L.). Physically blocking internode extension growth also blocked internode recovery of labelled carbon fed to the leaves, indicating that increased carbon accumulation is partially a consequence of increased extension growth in sunflower. However, low R/FR also promoted carbon accumulation in the lower section of the internode, where extension growth was unaffected. Although the levels of many soluble metabolites and of cell-wall carbohydrates increased in the stem in response to low R/FR, allowing conservation of their concentration, sucrose was present at a lower concentration under low R/FR. This change is anticipated to favour carbon unloading from the stem phloem. Low R/FR also reduced the levels of selected fatty acids, fatty acid alcohols, and sterols. Compared with the lower section, the upper section of the internode showed higher levels of organic acids, amino acids, fatty acids, and sterols. It is concluded that the promotion of stem extension growth by low R/FR ratios causes increased dry matter gain in sunflower internodes by a mechanism that is largely independent of changes in metabolism, since, whilst both low R/FR and ontogeny alter the metabolic profile, the changes do not correlate with the observed growth responses. في الستائر المتناثرة، تصل نسب اللون الأحمر المنخفض إلى الأحمر البعيد (R/FR) إلى السيقان ذات الاتجاه الرأسي فقط، والتي تستجيب بمعدلات امتداد أسرع. يظهر هنا أن هذه الإشارة تعزز أيضًا تراكم المادة الجافة الجذعية في عباد الشمس (Helianthus annuus) ولكن ليس في الخردل (Sinapis alba L.). كما أدى الحجب المادي لنمو امتداد العقدة الداخلية إلى منع استرداد العقدة الداخلية للكربون المسمى الذي يتم تغذيته على الأوراق، مما يشير إلى أن زيادة تراكم الكربون هي جزئيًا نتيجة لزيادة نمو الامتداد في عباد الشمس. ومع ذلك، فإن انخفاض R/FR عزز أيضًا تراكم الكربون في القسم السفلي من العقدة الداخلية، حيث لم يتأثر نمو الامتداد. على الرغم من أن مستويات العديد من المستقلبات القابلة للذوبان والكربوهيدرات في جدار الخلية زادت في الجذع استجابة لانخفاض R/FR، مما يسمح بالحفاظ على تركيزها، إلا أن السكروز كان موجودًا بتركيز أقل تحت R/FR منخفض. من المتوقع أن يكون هذا التغيير لصالح تفريغ الكربون من لحمة الجذع. كما أدى انخفاض R/FR إلى تقليل مستويات الأحماض الدهنية المختارة وكحول الأحماض الدهنية والستيرولات. بالمقارنة مع القسم السفلي، أظهر القسم العلوي من العقدة الداخلية مستويات أعلى من الأحماض العضوية والأحماض الأمينية والأحماض الدهنية والستيرولات. وخلص إلى أن تعزيز نمو امتداد الساق بنسب R/FR منخفضة يسبب زيادة كسب المادة الجافة في العقد الداخلية لعباد الشمس من خلال آلية مستقلة إلى حد كبير عن التغيرات في التمثيل الغذائي، لأنه في حين أن كلا من R/FR المنخفض و ontogeny يغيران المظهر الأيضي، فإن التغييرات لا ترتبط باستجابات النمو الملحوظة.

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    Journal of Experimental Botany
    Article . 2008 . Peer-reviewed
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      Journal of Experimental Botany
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    Authors: Marı́a Agustina Mazzella; María Inés Zanor; Alisdair R. Fernie; Jorge J. Casal;

    Dans les auvents clairsemés, les faibles ratios rouge à rouge foncé (R/FR) n'atteignent que les tiges orientées verticalement, qui répondent avec des taux d'extension plus rapides. Il est montré ici que ce signal favorise également l'accumulation de matière sèche de la tige dans le tournesol (Helianthus annuus) mais pas dans la moutarde (Sinapis alba L.). Le blocage physique de la croissance de l'extension entre les nœuds a également bloqué la récupération entre les nœuds du carbone marqué alimenté aux feuilles, ce qui indique que l'accumulation accrue de carbone est en partie une conséquence de la croissance accrue de l'extension chez le tournesol. Cependant, une faible R/FR a également favorisé l'accumulation de carbone dans la partie inférieure de l'entre-noeud, où la croissance de l'extension n'a pas été affectée. Bien que les niveaux de nombreux métabolites solubles et de glucides de la paroi cellulaire aient augmenté dans la tige en réponse à une faible R/FR, permettant la conservation de leur concentration, le saccharose était présent à une concentration plus faible sous une faible R/FR. Ce changement devrait favoriser le déchargement du carbone du phloème de la tige. Un faible R/FR a également réduit les niveaux d'acides gras, d'alcools d'acides gras et de stérols sélectionnés. Par rapport à la partie inférieure, la partie supérieure de l'entre-nœud présentait des niveaux plus élevés d'acides organiques, d'acides aminés, d'acides gras et de stérols. Il est conclu que la promotion de la croissance de l'extension de la tige par de faibles rapports R/FR entraîne une augmentation du gain de matière sèche dans les entre-nœuds de tournesol par un mécanisme largement indépendant des changements dans le métabolisme, car, bien que les faibles R/FR et l'ontogenèse modifient le profil métabolique, les changements ne sont pas corrélés avec les réponses de croissance observées. En las copas dispersas, las proporciones bajas de rojo a rojo lejano (R/FR) alcanzan solo los tallos orientados verticalmente, que responden con tasas de extensión más rápidas. Aquí se muestra que esta señal también promueve la acumulación de materia seca del tallo en el girasol (Helianthus annuus) pero no en la mostaza (Sinapis alba L.). El bloqueo físico del crecimiento de la extensión internodal también bloqueó la recuperación internodal del carbono etiquetado alimentado a las hojas, lo que indica que el aumento de la acumulación de carbono es en parte una consecuencia del aumento del crecimiento de la extensión en el girasol. Sin embargo, la baja R/FR también promovió la acumulación de carbono en la sección inferior del entrenudo, donde el crecimiento de la extensión no se vio afectado. Aunque los niveles de muchos metabolitos solubles y de carbohidratos de la pared celular aumentaron en el tallo en respuesta a una baja R/FR, lo que permitió conservar su concentración, la sacarosa estaba presente en una concentración más baja bajo una baja R/FR. Se prevé que este cambio favorezca la descarga de carbono del floema del tallo. El bajo R/FR también redujo los niveles de ácidos grasos, alcoholes de ácidos grasos y esteroles seleccionados. En comparación con la sección inferior, la sección superior del entrenudo mostró niveles más altos de ácidos orgánicos, aminoácidos, ácidos grasos y esteroles. Se concluye que la promoción del crecimiento de la extensión del tallo por bajas relaciones R/FR causa un aumento de la ganancia de materia seca en los entrenudos de girasol por un mecanismo que es en gran medida independiente de los cambios en el metabolismo, ya que, si bien tanto la baja R/FR como la ontogenia alteran el perfil metabólico, los cambios no se correlacionan con las respuestas de crecimiento observadas. In sparse canopies, low red to far-red (R/FR) ratios reach only vertically-oriented stems, which respond with faster rates of extension. It is shown here that this signal also promotes stem dry matter accumulation in sunflower (Helianthus annuus) but not in mustard (Sinapis alba L.). Physically blocking internode extension growth also blocked internode recovery of labelled carbon fed to the leaves, indicating that increased carbon accumulation is partially a consequence of increased extension growth in sunflower. However, low R/FR also promoted carbon accumulation in the lower section of the internode, where extension growth was unaffected. Although the levels of many soluble metabolites and of cell-wall carbohydrates increased in the stem in response to low R/FR, allowing conservation of their concentration, sucrose was present at a lower concentration under low R/FR. This change is anticipated to favour carbon unloading from the stem phloem. Low R/FR also reduced the levels of selected fatty acids, fatty acid alcohols, and sterols. Compared with the lower section, the upper section of the internode showed higher levels of organic acids, amino acids, fatty acids, and sterols. It is concluded that the promotion of stem extension growth by low R/FR ratios causes increased dry matter gain in sunflower internodes by a mechanism that is largely independent of changes in metabolism, since, whilst both low R/FR and ontogeny alter the metabolic profile, the changes do not correlate with the observed growth responses. في الستائر المتناثرة، تصل نسب اللون الأحمر المنخفض إلى الأحمر البعيد (R/FR) إلى السيقان ذات الاتجاه الرأسي فقط، والتي تستجيب بمعدلات امتداد أسرع. يظهر هنا أن هذه الإشارة تعزز أيضًا تراكم المادة الجافة الجذعية في عباد الشمس (Helianthus annuus) ولكن ليس في الخردل (Sinapis alba L.). كما أدى الحجب المادي لنمو امتداد العقدة الداخلية إلى منع استرداد العقدة الداخلية للكربون المسمى الذي يتم تغذيته على الأوراق، مما يشير إلى أن زيادة تراكم الكربون هي جزئيًا نتيجة لزيادة نمو الامتداد في عباد الشمس. ومع ذلك، فإن انخفاض R/FR عزز أيضًا تراكم الكربون في القسم السفلي من العقدة الداخلية، حيث لم يتأثر نمو الامتداد. على الرغم من أن مستويات العديد من المستقلبات القابلة للذوبان والكربوهيدرات في جدار الخلية زادت في الجذع استجابة لانخفاض R/FR، مما يسمح بالحفاظ على تركيزها، إلا أن السكروز كان موجودًا بتركيز أقل تحت R/FR منخفض. من المتوقع أن يكون هذا التغيير لصالح تفريغ الكربون من لحمة الجذع. كما أدى انخفاض R/FR إلى تقليل مستويات الأحماض الدهنية المختارة وكحول الأحماض الدهنية والستيرولات. بالمقارنة مع القسم السفلي، أظهر القسم العلوي من العقدة الداخلية مستويات أعلى من الأحماض العضوية والأحماض الأمينية والأحماض الدهنية والستيرولات. وخلص إلى أن تعزيز نمو امتداد الساق بنسب R/FR منخفضة يسبب زيادة كسب المادة الجافة في العقد الداخلية لعباد الشمس من خلال آلية مستقلة إلى حد كبير عن التغيرات في التمثيل الغذائي، لأنه في حين أن كلا من R/FR المنخفض و ontogeny يغيران المظهر الأيضي، فإن التغييرات لا ترتبط باستجابات النمو الملحوظة.

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    Journal of Experimental Botany
    Article . 2008 . Peer-reviewed
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      Journal of Experimental Botany
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    Authors: Saleh Alseekh; Annabella Klemmer; Jianbing Yan; Tingting Guo; +1 Authors

    The dual challenges of global population explosion and environmental deterioration represent major hurdles for 21st Century agriculture culminating in an unprecedented demand for food security. In this Review, we revisit historical concepts of plasticity and canalization before integrating them with contemporary studies of genotype-environment interactions (G×E) that are currently being carried out at the genome-wide level. In doing so we address both fundamental questions regarding G×E and potential strategies to best secure yields in both current and future climate scenarios.

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    Nature Communications
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    PubMed Central
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    Nature Communications
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      Nature Communications
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      Nature Communications
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    Authors: Saleh Alseekh; Annabella Klemmer; Jianbing Yan; Tingting Guo; +1 Authors

    The dual challenges of global population explosion and environmental deterioration represent major hurdles for 21st Century agriculture culminating in an unprecedented demand for food security. In this Review, we revisit historical concepts of plasticity and canalization before integrating them with contemporary studies of genotype-environment interactions (G×E) that are currently being carried out at the genome-wide level. In doing so we address both fundamental questions regarding G×E and potential strategies to best secure yields in both current and future climate scenarios.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Nature Communication...arrow_drop_down
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    Nature Communications
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    Nature Communications
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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Yuming Sun; Alisdair R. Fernie;

    Climate changes have unpredictable effects on ecosystems and agriculture. Plants adapt metabolically to overcome these challenges, with plant secondary metabolites (PSMs) being crucial for plant-environment interactions. Thus, understanding how PSMs respond to climate change is vital for future cultivation and breeding strategies. Here, we review PSM responses to climate changes such as elevated carbon dioxide, ozone, nitrogen deposition, heat and drought, as well as a combinations of different factors. These responses are complex, depending on stress dosage and duration, and metabolite classes. We finally identify mechanisms by which climate change affects PSM production ecologically and molecularly. While these observations provide insights into PSM responses to climate changes and the underlying regulatory mechanisms, considerable further research is required for a comprehensive understanding.

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    Trends in Plant Science
    Article . 2024 . Peer-reviewed
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      Trends in Plant Science
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    Authors: Yuming Sun; Alisdair R. Fernie;

    Climate changes have unpredictable effects on ecosystems and agriculture. Plants adapt metabolically to overcome these challenges, with plant secondary metabolites (PSMs) being crucial for plant-environment interactions. Thus, understanding how PSMs respond to climate change is vital for future cultivation and breeding strategies. Here, we review PSM responses to climate changes such as elevated carbon dioxide, ozone, nitrogen deposition, heat and drought, as well as a combinations of different factors. These responses are complex, depending on stress dosage and duration, and metabolite classes. We finally identify mechanisms by which climate change affects PSM production ecologically and molecularly. While these observations provide insights into PSM responses to climate changes and the underlying regulatory mechanisms, considerable further research is required for a comprehensive understanding.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Trends in Plant Scie...arrow_drop_down
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    Trends in Plant Science
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      Trends in Plant Science
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    Authors: Sandra Marcela Correa; Sandra Marcela Correa; Saleh Alseekh; Zoran Nikoloski; +6 Authors

    SUMMARYEfficient approaches to increase plant lipid production are necessary to meet current industrial demands for this important resource. While Jatropha curcas cell culture can be used for in vitro lipid production, scaling up the system for industrial applications requires an understanding of how growth conditions affect lipid metabolism and yield. Here we present a bottom‐up metabolic reconstruction of J. curcas supported with labeling experiments and biomass characterization under three growth conditions. We show that the metabolic model can accurately predict growth and distribution of fluxes in cell cultures and use these findings to pinpoint energy expenditures that affect lipid biosynthesis and metabolism. In addition, by using constraint‐based modeling approaches we identify network reactions whose joint manipulation optimizes lipid production. The proposed model and computational analyses provide a stepping stone for future rational optimization of other agronomically relevant traits in J. curcas.

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    The Plant Journal
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    The Plant Journal
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    MPG.PuRe
    Article . 2020
    Data sources: MPG.PuRe
    https://dx.doi.org/10.60692/kv...
    Other literature type . 2020
    Data sources: Datacite
    https://dx.doi.org/10.60692/n6...
    Other literature type . 2020
    Data sources: Datacite
    addClaim

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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ The Plant Journalarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      The Plant Journal
      Article . 2020 . Peer-reviewed
      License: CC BY
      Data sources: Crossref
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      The Plant Journal
      Article
      License: CC BY
      Data sources: UnpayWall
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      MPG.PuRe
      Article . 2020
      Data sources: MPG.PuRe
      https://dx.doi.org/10.60692/kv...
      Other literature type . 2020
      Data sources: Datacite
      https://dx.doi.org/10.60692/n6...
      Other literature type . 2020
      Data sources: Datacite
      addClaim

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Sandra Marcela Correa; Sandra Marcela Correa; Saleh Alseekh; Zoran Nikoloski; +6 Authors

    SUMMARYEfficient approaches to increase plant lipid production are necessary to meet current industrial demands for this important resource. While Jatropha curcas cell culture can be used for in vitro lipid production, scaling up the system for industrial applications requires an understanding of how growth conditions affect lipid metabolism and yield. Here we present a bottom‐up metabolic reconstruction of J. curcas supported with labeling experiments and biomass characterization under three growth conditions. We show that the metabolic model can accurately predict growth and distribution of fluxes in cell cultures and use these findings to pinpoint energy expenditures that affect lipid biosynthesis and metabolism. In addition, by using constraint‐based modeling approaches we identify network reactions whose joint manipulation optimizes lipid production. The proposed model and computational analyses provide a stepping stone for future rational optimization of other agronomically relevant traits in J. curcas.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ The Plant Journalarrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    The Plant Journal
    Article . 2020 . Peer-reviewed
    License: CC BY
    Data sources: Crossref
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    The Plant Journal
    Article
    License: CC BY
    Data sources: UnpayWall
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    MPG.PuRe
    Article . 2020
    Data sources: MPG.PuRe
    https://dx.doi.org/10.60692/kv...
    Other literature type . 2020
    Data sources: Datacite
    https://dx.doi.org/10.60692/n6...
    Other literature type . 2020
    Data sources: Datacite
    addClaim

    This Research product is the result of merged Research products in OpenAIRE.

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    10
    citations10
    popularityTop 10%
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    impulseTop 10%
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ The Plant Journalarrow_drop_down
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      The Plant Journal
      Article . 2020 . Peer-reviewed
      License: CC BY
      Data sources: Crossref
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      The Plant Journal
      Article
      License: CC BY
      Data sources: UnpayWall
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      MPG.PuRe
      Article . 2020
      Data sources: MPG.PuRe
      https://dx.doi.org/10.60692/kv...
      Other literature type . 2020
      Data sources: Datacite
      https://dx.doi.org/10.60692/n6...
      Other literature type . 2020
      Data sources: Datacite
      addClaim

      This Research product is the result of merged Research products in OpenAIRE.

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Pérez‐Alfocea, Francisco; Borghi, Monica; Guerrero, Juan José; Jiménez, Antonio R.; +3 Authors

    SUMMARYFood security is threatened by climate change, with heat and drought being the main stresses affecting crop physiology and ecosystem services, such as plant–pollinator interactions. We hypothesize that tracking and ranking pollinators' preferences for flowers under environmental pressure could be used as a marker of plant quality for agricultural breeding to increase crop stress tolerance. Despite increasing relevance of flowers as the most stress sensitive organs, phenotyping platforms aim at identifying traits of resilience by assessing the plant physiological status through remote sensing‐assisted vegetative indexes, but find strong bottlenecks in quantifying flower traits and in accurate genotype‐to‐phenotype prediction. However, as the transport of photoassimilates from leaves (sources) to flowers (sinks) is reduced in low‐resilient plants, flowers are better indicators than leaves of plant well‐being. Indeed, the chemical composition and amount of pollen and nectar that flowers produce, which ultimately serve as food resources for pollinators, change in response to environmental cues. Therefore, pollinators' preferences could be used as a measure of functional source‐to‐sink relationships for breeding decisions. To achieve this challenging goal, we propose to develop a pollinator‐assisted phenotyping and selection platform for automated quantification of Genotype × Environment × Pollinator interactions through an insect geo‐positioning system. Pollinator‐assisted selection can be validated by metabolic, transcriptomic, and ionomic traits, and mapping of candidate genes, linking floral and leaf traits, pollinator preferences, plant resilience, and crop productivity. This radical new approach can change the current paradigm of plant phenotyping and find new paths for crop redomestication and breeding assisted by ecological decisions.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ The Plant Journalarrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    The Plant Journal
    Article . 2024 . Peer-reviewed
    License: CC BY NC ND
    Data sources: Crossref
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    DIGITAL.CSIC
    Article . 2024 . Peer-reviewed
    Data sources: DIGITAL.CSIC
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    ZENODO
    Article . 2024
    License: CC BY
    Data sources: ZENODO
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    ZENODO
    Article . 2024
    License: CC BY
    Data sources: ZENODO
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ The Plant Journalarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      The Plant Journal
      Article . 2024 . Peer-reviewed
      License: CC BY NC ND
      Data sources: Crossref
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      DIGITAL.CSIC
      Article . 2024 . Peer-reviewed
      Data sources: DIGITAL.CSIC
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Article . 2024
      License: CC BY
      Data sources: ZENODO
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Article . 2024
      License: CC BY
      Data sources: ZENODO
      addClaim

      This Research product is the result of merged Research products in OpenAIRE.

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Pérez‐Alfocea, Francisco; Borghi, Monica; Guerrero, Juan José; Jiménez, Antonio R.; +3 Authors

    SUMMARYFood security is threatened by climate change, with heat and drought being the main stresses affecting crop physiology and ecosystem services, such as plant–pollinator interactions. We hypothesize that tracking and ranking pollinators' preferences for flowers under environmental pressure could be used as a marker of plant quality for agricultural breeding to increase crop stress tolerance. Despite increasing relevance of flowers as the most stress sensitive organs, phenotyping platforms aim at identifying traits of resilience by assessing the plant physiological status through remote sensing‐assisted vegetative indexes, but find strong bottlenecks in quantifying flower traits and in accurate genotype‐to‐phenotype prediction. However, as the transport of photoassimilates from leaves (sources) to flowers (sinks) is reduced in low‐resilient plants, flowers are better indicators than leaves of plant well‐being. Indeed, the chemical composition and amount of pollen and nectar that flowers produce, which ultimately serve as food resources for pollinators, change in response to environmental cues. Therefore, pollinators' preferences could be used as a measure of functional source‐to‐sink relationships for breeding decisions. To achieve this challenging goal, we propose to develop a pollinator‐assisted phenotyping and selection platform for automated quantification of Genotype × Environment × Pollinator interactions through an insect geo‐positioning system. Pollinator‐assisted selection can be validated by metabolic, transcriptomic, and ionomic traits, and mapping of candidate genes, linking floral and leaf traits, pollinator preferences, plant resilience, and crop productivity. This radical new approach can change the current paradigm of plant phenotyping and find new paths for crop redomestication and breeding assisted by ecological decisions.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ The Plant Journalarrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    The Plant Journal
    Article . 2024 . Peer-reviewed
    License: CC BY NC ND
    Data sources: Crossref
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    DIGITAL.CSIC
    Article . 2024 . Peer-reviewed
    Data sources: DIGITAL.CSIC
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    ZENODO
    Article . 2024
    License: CC BY
    Data sources: ZENODO
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    ZENODO
    Article . 2024
    License: CC BY
    Data sources: ZENODO
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ The Plant Journalarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      The Plant Journal
      Article . 2024 . Peer-reviewed
      License: CC BY NC ND
      Data sources: Crossref
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      DIGITAL.CSIC
      Article . 2024 . Peer-reviewed
      Data sources: DIGITAL.CSIC
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Article . 2024
      License: CC BY
      Data sources: ZENODO
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Article . 2024
      License: CC BY
      Data sources: ZENODO
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Yuming Sun; Saleh Alseekh; Alisdair R. Fernie;

    AbstractPlant secondary metabolites (SMs) play crucial roles in plant‐environment interactions and contribute greatly to human health. Global climate changes are expected to dramatically affect plant secondary metabolism, yet a systematic understanding of such influences is still lacking. Here, we employed medicinal and aromatic plants (MAAPs) as model plant taxa and performed a meta‐analysis from 360 publications using 1828 paired observations to assess the responses of different SMs levels and the accompanying plant traits to elevated carbon dioxide (eCO2), elevated temperature (eT), elevated nitrogen deposition (eN) and decreased precipitation (dP). The overall results showed that phenolic and terpenoid levels generally respond positively to eCO2 but negatively to eN, while the total alkaloid concentration was increased remarkably by eN. By contrast, dP promotes the levels of all SMs, while eT exclusively exerts a positive influence on the levels of phenolic compounds. Further analysis highlighted the dependence of SM responses on different moderators such as plant functional types, climate change levels or exposure durations, mean annual temperature and mean annual precipitation. Moreover, plant phenolic and terpenoid responses to climate changes could be attributed to the variations of C/N ratio and total soluble sugar levels, while the trade‐off supposition contributed to SM responses to climate changes other than eCO2. Taken together, our results predicted the distinctive SM responses to diverse climate changes in MAAPs and allowed us to define potential moderators responsible for these variations. Further, linking SM responses to C‐N metabolism and growth‐defence balance provided biological understandings in terms of plant secondary metabolic regulation.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Global Change Biolog...arrow_drop_down
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    Global Change Biology
    Article . 2022 . Peer-reviewed
    License: CC BY NC
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      Global Change Biology
      Article . 2022 . Peer-reviewed
      License: CC BY NC
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Yuming Sun; Saleh Alseekh; Alisdair R. Fernie;

    AbstractPlant secondary metabolites (SMs) play crucial roles in plant‐environment interactions and contribute greatly to human health. Global climate changes are expected to dramatically affect plant secondary metabolism, yet a systematic understanding of such influences is still lacking. Here, we employed medicinal and aromatic plants (MAAPs) as model plant taxa and performed a meta‐analysis from 360 publications using 1828 paired observations to assess the responses of different SMs levels and the accompanying plant traits to elevated carbon dioxide (eCO2), elevated temperature (eT), elevated nitrogen deposition (eN) and decreased precipitation (dP). The overall results showed that phenolic and terpenoid levels generally respond positively to eCO2 but negatively to eN, while the total alkaloid concentration was increased remarkably by eN. By contrast, dP promotes the levels of all SMs, while eT exclusively exerts a positive influence on the levels of phenolic compounds. Further analysis highlighted the dependence of SM responses on different moderators such as plant functional types, climate change levels or exposure durations, mean annual temperature and mean annual precipitation. Moreover, plant phenolic and terpenoid responses to climate changes could be attributed to the variations of C/N ratio and total soluble sugar levels, while the trade‐off supposition contributed to SM responses to climate changes other than eCO2. Taken together, our results predicted the distinctive SM responses to diverse climate changes in MAAPs and allowed us to define potential moderators responsible for these variations. Further, linking SM responses to C‐N metabolism and growth‐defence balance provided biological understandings in terms of plant secondary metabolic regulation.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Global Change Biolog...arrow_drop_down
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    Global Change Biology
    Article . 2022 . Peer-reviewed
    License: CC BY NC
    Data sources: Crossref
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Global Change Biolog...arrow_drop_down
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      Global Change Biology
      Article . 2022 . Peer-reviewed
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12 Research products
  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Monica Borghi; Leonardo Perez de Souza; Takuya Yoshida; Alisdair R. Fernie;

    SummaryAdverse climatic conditions at the time of flowering severely hinder crop yields and threaten the interactions between plants and their pollinators. These features depend on a common trait: the metabolism of flowers. In this Viewpoint article, we aim to provide insight into the metabolic changes that occur in flowers in response to changes in climate and emphasize that these changes severely impact the fitness of autogamous and allogamous species, plant–pollinator interactions, and overall ecosystem health. We review the biochemical processes that lead to failure of gamete development and to alterations of color, scent and nectar secretion. Then, making use of open access expression data, we examine the expression of genes that may drive these changes in response to heat and drought. Finally, we present measurements of metabolites from flowers exposed to a heat wave and discuss how the results of this short‐term experiment may give rise to misleading conclusions regarding the positive effect of heat on flower fitness. We hope this article draws attention to this often‐neglected dynamic and its important consequences.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ New Phytologistarrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    New Phytologist
    Article
    Data sources: UnpayWall
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    MPG.PuRe
    Article . 2019
    Data sources: MPG.PuRe
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    New Phytologist
    Article . 2019 . Peer-reviewed
    License: Wiley Online Library User Agreement
    Data sources: Crossref
    New Phytologist
    Article . 2020
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    114
    citations114
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ New Phytologistarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      New Phytologist
      Article
      Data sources: UnpayWall
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      MPG.PuRe
      Article . 2019
      Data sources: MPG.PuRe
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      New Phytologist
      Article . 2019 . Peer-reviewed
      License: Wiley Online Library User Agreement
      Data sources: Crossref
      New Phytologist
      Article . 2020
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Monica Borghi; Leonardo Perez de Souza; Takuya Yoshida; Alisdair R. Fernie;

    SummaryAdverse climatic conditions at the time of flowering severely hinder crop yields and threaten the interactions between plants and their pollinators. These features depend on a common trait: the metabolism of flowers. In this Viewpoint article, we aim to provide insight into the metabolic changes that occur in flowers in response to changes in climate and emphasize that these changes severely impact the fitness of autogamous and allogamous species, plant–pollinator interactions, and overall ecosystem health. We review the biochemical processes that lead to failure of gamete development and to alterations of color, scent and nectar secretion. Then, making use of open access expression data, we examine the expression of genes that may drive these changes in response to heat and drought. Finally, we present measurements of metabolites from flowers exposed to a heat wave and discuss how the results of this short‐term experiment may give rise to misleading conclusions regarding the positive effect of heat on flower fitness. We hope this article draws attention to this often‐neglected dynamic and its important consequences.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ New Phytologistarrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    New Phytologist
    Article
    Data sources: UnpayWall
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    MPG.PuRe
    Article . 2019
    Data sources: MPG.PuRe
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    New Phytologist
    Article . 2019 . Peer-reviewed
    License: Wiley Online Library User Agreement
    Data sources: Crossref
    New Phytologist
    Article . 2020
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    114
    citations114
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ New Phytologistarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      New Phytologist
      Article
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      MPG.PuRe
      Article . 2019
      Data sources: MPG.PuRe
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      New Phytologist
      Article . 2019 . Peer-reviewed
      License: Wiley Online Library User Agreement
      Data sources: Crossref
      New Phytologist
      Article . 2020
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Toshihiro Obata; Toshihiro Obata; Mark Stitt; Nicole Krohn; +13 Authors

    Abstract Phytochrome photoreceptors are known to regulate plastic growth responses to vegetation shade. However, recent reports also suggest an important role for phytochromes in carbon resource management, metabolism, and growth. Here, we use 13CO2 labelling patterns in multiallele phy mutants to investigate the role of phytochrome in the control of metabolic fluxes. We also combine quantitative data of 13C incorporation into protein and cell wall polymers, gas exchange measurements, and system modelling to investigate why biomass is decreased in adult multiallele phy mutants. Phytochrome influences the synthesis of stress metabolites such as raffinose and proline, and the accumulation of sugars, possibly through regulating vacuolar sugar transport. Remarkably, despite their modified metabolism and vastly altered architecture, growth rates in adult phy mutants resemble those of wild-type plants. Our results point to delayed seedling growth and smaller cotyledon size as the cause of the adult-stage phy mutant biomass defect. Our data signify a role for phytochrome in metabolic stress physiology and carbon partitioning, and illustrate that phytochrome action at the seedling stage sets the trajectory for adult biomass production.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Journal of Experimen...arrow_drop_down
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    Journal of Experimental Botany
    Article . 2021 . Peer-reviewed
    License: OUP Standard Publication Reuse
    Data sources: Crossref
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Journal of Experimental Botany
    Article . 2021 . Peer-reviewed
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Journal of Experimen...arrow_drop_down
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      Journal of Experimental Botany
      Article . 2021 . Peer-reviewed
      License: OUP Standard Publication Reuse
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      Journal of Experimental Botany
      Article . 2021 . Peer-reviewed
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Toshihiro Obata; Toshihiro Obata; Mark Stitt; Nicole Krohn; +13 Authors

    Abstract Phytochrome photoreceptors are known to regulate plastic growth responses to vegetation shade. However, recent reports also suggest an important role for phytochromes in carbon resource management, metabolism, and growth. Here, we use 13CO2 labelling patterns in multiallele phy mutants to investigate the role of phytochrome in the control of metabolic fluxes. We also combine quantitative data of 13C incorporation into protein and cell wall polymers, gas exchange measurements, and system modelling to investigate why biomass is decreased in adult multiallele phy mutants. Phytochrome influences the synthesis of stress metabolites such as raffinose and proline, and the accumulation of sugars, possibly through regulating vacuolar sugar transport. Remarkably, despite their modified metabolism and vastly altered architecture, growth rates in adult phy mutants resemble those of wild-type plants. Our results point to delayed seedling growth and smaller cotyledon size as the cause of the adult-stage phy mutant biomass defect. Our data signify a role for phytochrome in metabolic stress physiology and carbon partitioning, and illustrate that phytochrome action at the seedling stage sets the trajectory for adult biomass production.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Journal of Experimen...arrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Journal of Experimental Botany
    Article . 2021 . Peer-reviewed
    License: OUP Standard Publication Reuse
    Data sources: Crossref
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Journal of Experimental Botany
    Article . 2021 . Peer-reviewed
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      Journal of Experimental Botany
      Article . 2021 . Peer-reviewed
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      Journal of Experimental Botany
      Article . 2021 . Peer-reviewed
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    Authors: Agustin Zsögön; Lázaro E. P. Peres; Yingjie Xiao; Jianbing Yan; +1 Authors

    SUMMARYGlobal agriculture is dominated by a handful of species that currently supply a huge proportion of our food and feed. It additionally faces the massive challenge of providing food for 10 billion people by 2050, despite increasing environmental deterioration. One way to better plan production in the face of current and continuing climate change is to better understand how our domestication of these crops included their adaptation to environments that were highly distinct from those of their centre of origin. There are many prominent examples of this, including the development of temperate Zea mays (maize) and the alteration of day‐length requirements in Solanum tuberosum (potato). Despite the pre‐eminence of some 15 crops, more than 50 000 species are edible, with 7000 of these considered semi‐cultivated. Opportunities afforded by next‐generation sequencing technologies alongside other methods, including metabolomics and high‐throughput phenotyping, are starting to contribute to a better characterization of a handful of these species. Moreover, the first examples of de novo domestication have appeared, whereby key target genes are modified in a wild species in order to confer predictable traits of agronomic value. Here, we review the scale of the challenge, drawing extensively on the characterization of past agriculture to suggest informed strategies upon which the breeding of future climate‐resilient crops can be based.

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    The Plant Journal
    Article . 2021 . Peer-reviewed
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      The Plant Journal
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    Authors: Agustin Zsögön; Lázaro E. P. Peres; Yingjie Xiao; Jianbing Yan; +1 Authors

    SUMMARYGlobal agriculture is dominated by a handful of species that currently supply a huge proportion of our food and feed. It additionally faces the massive challenge of providing food for 10 billion people by 2050, despite increasing environmental deterioration. One way to better plan production in the face of current and continuing climate change is to better understand how our domestication of these crops included their adaptation to environments that were highly distinct from those of their centre of origin. There are many prominent examples of this, including the development of temperate Zea mays (maize) and the alteration of day‐length requirements in Solanum tuberosum (potato). Despite the pre‐eminence of some 15 crops, more than 50 000 species are edible, with 7000 of these considered semi‐cultivated. Opportunities afforded by next‐generation sequencing technologies alongside other methods, including metabolomics and high‐throughput phenotyping, are starting to contribute to a better characterization of a handful of these species. Moreover, the first examples of de novo domestication have appeared, whereby key target genes are modified in a wild species in order to confer predictable traits of agronomic value. Here, we review the scale of the challenge, drawing extensively on the characterization of past agriculture to suggest informed strategies upon which the breeding of future climate‐resilient crops can be based.

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    The Plant Journal
    Article . 2021 . Peer-reviewed
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      The Plant Journal
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    Authors: Xiaohui Jiang; Weiyi Zhang; Alisdair R. Fernie; Weiwei Wen;

    SUMMARYHorticultural crops mainly include fruits, vegetables, ornamental trees and flowers, and tea trees (Melaleuca alternifolia). They produce a variety of nutrients for the daily human diet in addition to the nutrition provided by staple crops, and some of them additionally possess ornamental and medicinal features. As such, horticultural crops make unique and important contributions to both food security and a colorful lifestyle. Under the current climate change scenario, the growing population and limited arable land means that agriculture, and especially horticulture, has been facing unprecedented challenges to meet the diverse demands of human daily life. Breeding horticultural crops with high quality and adaptability and establishing an effective system that combines cultivation, post‐harvest handling, and sales becomes increasingly imperative for horticultural production. This review discusses characteristic and recent research highlights in horticultural crops, focusing on the breeding of quality traits and the mechanisms that underpin them. It additionally addresses challenges and potential solutions in horticultural production and post‐harvest practices. Finally, we provide a prospective as to how emerging technologies can be implemented alongside interdisciplinary basic research to enhance our understanding and exploitation of horticultural crops.

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    The Plant Journal
    Article . 2021 . Peer-reviewed
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      The Plant Journal
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    Authors: Xiaohui Jiang; Weiyi Zhang; Alisdair R. Fernie; Weiwei Wen;

    SUMMARYHorticultural crops mainly include fruits, vegetables, ornamental trees and flowers, and tea trees (Melaleuca alternifolia). They produce a variety of nutrients for the daily human diet in addition to the nutrition provided by staple crops, and some of them additionally possess ornamental and medicinal features. As such, horticultural crops make unique and important contributions to both food security and a colorful lifestyle. Under the current climate change scenario, the growing population and limited arable land means that agriculture, and especially horticulture, has been facing unprecedented challenges to meet the diverse demands of human daily life. Breeding horticultural crops with high quality and adaptability and establishing an effective system that combines cultivation, post‐harvest handling, and sales becomes increasingly imperative for horticultural production. This review discusses characteristic and recent research highlights in horticultural crops, focusing on the breeding of quality traits and the mechanisms that underpin them. It additionally addresses challenges and potential solutions in horticultural production and post‐harvest practices. Finally, we provide a prospective as to how emerging technologies can be implemented alongside interdisciplinary basic research to enhance our understanding and exploitation of horticultural crops.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao The Plant Journalarrow_drop_down
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    The Plant Journal
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      The Plant Journal
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    Authors: Marı́a Agustina Mazzella; María Inés Zanor; Alisdair R. Fernie; Jorge J. Casal;

    Dans les auvents clairsemés, les faibles ratios rouge à rouge foncé (R/FR) n'atteignent que les tiges orientées verticalement, qui répondent avec des taux d'extension plus rapides. Il est montré ici que ce signal favorise également l'accumulation de matière sèche de la tige dans le tournesol (Helianthus annuus) mais pas dans la moutarde (Sinapis alba L.). Le blocage physique de la croissance de l'extension entre les nœuds a également bloqué la récupération entre les nœuds du carbone marqué alimenté aux feuilles, ce qui indique que l'accumulation accrue de carbone est en partie une conséquence de la croissance accrue de l'extension chez le tournesol. Cependant, une faible R/FR a également favorisé l'accumulation de carbone dans la partie inférieure de l'entre-noeud, où la croissance de l'extension n'a pas été affectée. Bien que les niveaux de nombreux métabolites solubles et de glucides de la paroi cellulaire aient augmenté dans la tige en réponse à une faible R/FR, permettant la conservation de leur concentration, le saccharose était présent à une concentration plus faible sous une faible R/FR. Ce changement devrait favoriser le déchargement du carbone du phloème de la tige. Un faible R/FR a également réduit les niveaux d'acides gras, d'alcools d'acides gras et de stérols sélectionnés. Par rapport à la partie inférieure, la partie supérieure de l'entre-nœud présentait des niveaux plus élevés d'acides organiques, d'acides aminés, d'acides gras et de stérols. Il est conclu que la promotion de la croissance de l'extension de la tige par de faibles rapports R/FR entraîne une augmentation du gain de matière sèche dans les entre-nœuds de tournesol par un mécanisme largement indépendant des changements dans le métabolisme, car, bien que les faibles R/FR et l'ontogenèse modifient le profil métabolique, les changements ne sont pas corrélés avec les réponses de croissance observées. En las copas dispersas, las proporciones bajas de rojo a rojo lejano (R/FR) alcanzan solo los tallos orientados verticalmente, que responden con tasas de extensión más rápidas. Aquí se muestra que esta señal también promueve la acumulación de materia seca del tallo en el girasol (Helianthus annuus) pero no en la mostaza (Sinapis alba L.). El bloqueo físico del crecimiento de la extensión internodal también bloqueó la recuperación internodal del carbono etiquetado alimentado a las hojas, lo que indica que el aumento de la acumulación de carbono es en parte una consecuencia del aumento del crecimiento de la extensión en el girasol. Sin embargo, la baja R/FR también promovió la acumulación de carbono en la sección inferior del entrenudo, donde el crecimiento de la extensión no se vio afectado. Aunque los niveles de muchos metabolitos solubles y de carbohidratos de la pared celular aumentaron en el tallo en respuesta a una baja R/FR, lo que permitió conservar su concentración, la sacarosa estaba presente en una concentración más baja bajo una baja R/FR. Se prevé que este cambio favorezca la descarga de carbono del floema del tallo. El bajo R/FR también redujo los niveles de ácidos grasos, alcoholes de ácidos grasos y esteroles seleccionados. En comparación con la sección inferior, la sección superior del entrenudo mostró niveles más altos de ácidos orgánicos, aminoácidos, ácidos grasos y esteroles. Se concluye que la promoción del crecimiento de la extensión del tallo por bajas relaciones R/FR causa un aumento de la ganancia de materia seca en los entrenudos de girasol por un mecanismo que es en gran medida independiente de los cambios en el metabolismo, ya que, si bien tanto la baja R/FR como la ontogenia alteran el perfil metabólico, los cambios no se correlacionan con las respuestas de crecimiento observadas. In sparse canopies, low red to far-red (R/FR) ratios reach only vertically-oriented stems, which respond with faster rates of extension. It is shown here that this signal also promotes stem dry matter accumulation in sunflower (Helianthus annuus) but not in mustard (Sinapis alba L.). Physically blocking internode extension growth also blocked internode recovery of labelled carbon fed to the leaves, indicating that increased carbon accumulation is partially a consequence of increased extension growth in sunflower. However, low R/FR also promoted carbon accumulation in the lower section of the internode, where extension growth was unaffected. Although the levels of many soluble metabolites and of cell-wall carbohydrates increased in the stem in response to low R/FR, allowing conservation of their concentration, sucrose was present at a lower concentration under low R/FR. This change is anticipated to favour carbon unloading from the stem phloem. Low R/FR also reduced the levels of selected fatty acids, fatty acid alcohols, and sterols. Compared with the lower section, the upper section of the internode showed higher levels of organic acids, amino acids, fatty acids, and sterols. It is concluded that the promotion of stem extension growth by low R/FR ratios causes increased dry matter gain in sunflower internodes by a mechanism that is largely independent of changes in metabolism, since, whilst both low R/FR and ontogeny alter the metabolic profile, the changes do not correlate with the observed growth responses. في الستائر المتناثرة، تصل نسب اللون الأحمر المنخفض إلى الأحمر البعيد (R/FR) إلى السيقان ذات الاتجاه الرأسي فقط، والتي تستجيب بمعدلات امتداد أسرع. يظهر هنا أن هذه الإشارة تعزز أيضًا تراكم المادة الجافة الجذعية في عباد الشمس (Helianthus annuus) ولكن ليس في الخردل (Sinapis alba L.). كما أدى الحجب المادي لنمو امتداد العقدة الداخلية إلى منع استرداد العقدة الداخلية للكربون المسمى الذي يتم تغذيته على الأوراق، مما يشير إلى أن زيادة تراكم الكربون هي جزئيًا نتيجة لزيادة نمو الامتداد في عباد الشمس. ومع ذلك، فإن انخفاض R/FR عزز أيضًا تراكم الكربون في القسم السفلي من العقدة الداخلية، حيث لم يتأثر نمو الامتداد. على الرغم من أن مستويات العديد من المستقلبات القابلة للذوبان والكربوهيدرات في جدار الخلية زادت في الجذع استجابة لانخفاض R/FR، مما يسمح بالحفاظ على تركيزها، إلا أن السكروز كان موجودًا بتركيز أقل تحت R/FR منخفض. من المتوقع أن يكون هذا التغيير لصالح تفريغ الكربون من لحمة الجذع. كما أدى انخفاض R/FR إلى تقليل مستويات الأحماض الدهنية المختارة وكحول الأحماض الدهنية والستيرولات. بالمقارنة مع القسم السفلي، أظهر القسم العلوي من العقدة الداخلية مستويات أعلى من الأحماض العضوية والأحماض الأمينية والأحماض الدهنية والستيرولات. وخلص إلى أن تعزيز نمو امتداد الساق بنسب R/FR منخفضة يسبب زيادة كسب المادة الجافة في العقد الداخلية لعباد الشمس من خلال آلية مستقلة إلى حد كبير عن التغيرات في التمثيل الغذائي، لأنه في حين أن كلا من R/FR المنخفض و ontogeny يغيران المظهر الأيضي، فإن التغييرات لا ترتبط باستجابات النمو الملحوظة.

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    Journal of Experimental Botany
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    Authors: Marı́a Agustina Mazzella; María Inés Zanor; Alisdair R. Fernie; Jorge J. Casal;

    Dans les auvents clairsemés, les faibles ratios rouge à rouge foncé (R/FR) n'atteignent que les tiges orientées verticalement, qui répondent avec des taux d'extension plus rapides. Il est montré ici que ce signal favorise également l'accumulation de matière sèche de la tige dans le tournesol (Helianthus annuus) mais pas dans la moutarde (Sinapis alba L.). Le blocage physique de la croissance de l'extension entre les nœuds a également bloqué la récupération entre les nœuds du carbone marqué alimenté aux feuilles, ce qui indique que l'accumulation accrue de carbone est en partie une conséquence de la croissance accrue de l'extension chez le tournesol. Cependant, une faible R/FR a également favorisé l'accumulation de carbone dans la partie inférieure de l'entre-noeud, où la croissance de l'extension n'a pas été affectée. Bien que les niveaux de nombreux métabolites solubles et de glucides de la paroi cellulaire aient augmenté dans la tige en réponse à une faible R/FR, permettant la conservation de leur concentration, le saccharose était présent à une concentration plus faible sous une faible R/FR. Ce changement devrait favoriser le déchargement du carbone du phloème de la tige. Un faible R/FR a également réduit les niveaux d'acides gras, d'alcools d'acides gras et de stérols sélectionnés. Par rapport à la partie inférieure, la partie supérieure de l'entre-nœud présentait des niveaux plus élevés d'acides organiques, d'acides aminés, d'acides gras et de stérols. Il est conclu que la promotion de la croissance de l'extension de la tige par de faibles rapports R/FR entraîne une augmentation du gain de matière sèche dans les entre-nœuds de tournesol par un mécanisme largement indépendant des changements dans le métabolisme, car, bien que les faibles R/FR et l'ontogenèse modifient le profil métabolique, les changements ne sont pas corrélés avec les réponses de croissance observées. En las copas dispersas, las proporciones bajas de rojo a rojo lejano (R/FR) alcanzan solo los tallos orientados verticalmente, que responden con tasas de extensión más rápidas. Aquí se muestra que esta señal también promueve la acumulación de materia seca del tallo en el girasol (Helianthus annuus) pero no en la mostaza (Sinapis alba L.). El bloqueo físico del crecimiento de la extensión internodal también bloqueó la recuperación internodal del carbono etiquetado alimentado a las hojas, lo que indica que el aumento de la acumulación de carbono es en parte una consecuencia del aumento del crecimiento de la extensión en el girasol. Sin embargo, la baja R/FR también promovió la acumulación de carbono en la sección inferior del entrenudo, donde el crecimiento de la extensión no se vio afectado. Aunque los niveles de muchos metabolitos solubles y de carbohidratos de la pared celular aumentaron en el tallo en respuesta a una baja R/FR, lo que permitió conservar su concentración, la sacarosa estaba presente en una concentración más baja bajo una baja R/FR. Se prevé que este cambio favorezca la descarga de carbono del floema del tallo. El bajo R/FR también redujo los niveles de ácidos grasos, alcoholes de ácidos grasos y esteroles seleccionados. En comparación con la sección inferior, la sección superior del entrenudo mostró niveles más altos de ácidos orgánicos, aminoácidos, ácidos grasos y esteroles. Se concluye que la promoción del crecimiento de la extensión del tallo por bajas relaciones R/FR causa un aumento de la ganancia de materia seca en los entrenudos de girasol por un mecanismo que es en gran medida independiente de los cambios en el metabolismo, ya que, si bien tanto la baja R/FR como la ontogenia alteran el perfil metabólico, los cambios no se correlacionan con las respuestas de crecimiento observadas. In sparse canopies, low red to far-red (R/FR) ratios reach only vertically-oriented stems, which respond with faster rates of extension. It is shown here that this signal also promotes stem dry matter accumulation in sunflower (Helianthus annuus) but not in mustard (Sinapis alba L.). Physically blocking internode extension growth also blocked internode recovery of labelled carbon fed to the leaves, indicating that increased carbon accumulation is partially a consequence of increased extension growth in sunflower. However, low R/FR also promoted carbon accumulation in the lower section of the internode, where extension growth was unaffected. Although the levels of many soluble metabolites and of cell-wall carbohydrates increased in the stem in response to low R/FR, allowing conservation of their concentration, sucrose was present at a lower concentration under low R/FR. This change is anticipated to favour carbon unloading from the stem phloem. Low R/FR also reduced the levels of selected fatty acids, fatty acid alcohols, and sterols. Compared with the lower section, the upper section of the internode showed higher levels of organic acids, amino acids, fatty acids, and sterols. It is concluded that the promotion of stem extension growth by low R/FR ratios causes increased dry matter gain in sunflower internodes by a mechanism that is largely independent of changes in metabolism, since, whilst both low R/FR and ontogeny alter the metabolic profile, the changes do not correlate with the observed growth responses. في الستائر المتناثرة، تصل نسب اللون الأحمر المنخفض إلى الأحمر البعيد (R/FR) إلى السيقان ذات الاتجاه الرأسي فقط، والتي تستجيب بمعدلات امتداد أسرع. يظهر هنا أن هذه الإشارة تعزز أيضًا تراكم المادة الجافة الجذعية في عباد الشمس (Helianthus annuus) ولكن ليس في الخردل (Sinapis alba L.). كما أدى الحجب المادي لنمو امتداد العقدة الداخلية إلى منع استرداد العقدة الداخلية للكربون المسمى الذي يتم تغذيته على الأوراق، مما يشير إلى أن زيادة تراكم الكربون هي جزئيًا نتيجة لزيادة نمو الامتداد في عباد الشمس. ومع ذلك، فإن انخفاض R/FR عزز أيضًا تراكم الكربون في القسم السفلي من العقدة الداخلية، حيث لم يتأثر نمو الامتداد. على الرغم من أن مستويات العديد من المستقلبات القابلة للذوبان والكربوهيدرات في جدار الخلية زادت في الجذع استجابة لانخفاض R/FR، مما يسمح بالحفاظ على تركيزها، إلا أن السكروز كان موجودًا بتركيز أقل تحت R/FR منخفض. من المتوقع أن يكون هذا التغيير لصالح تفريغ الكربون من لحمة الجذع. كما أدى انخفاض R/FR إلى تقليل مستويات الأحماض الدهنية المختارة وكحول الأحماض الدهنية والستيرولات. بالمقارنة مع القسم السفلي، أظهر القسم العلوي من العقدة الداخلية مستويات أعلى من الأحماض العضوية والأحماض الأمينية والأحماض الدهنية والستيرولات. وخلص إلى أن تعزيز نمو امتداد الساق بنسب R/FR منخفضة يسبب زيادة كسب المادة الجافة في العقد الداخلية لعباد الشمس من خلال آلية مستقلة إلى حد كبير عن التغيرات في التمثيل الغذائي، لأنه في حين أن كلا من R/FR المنخفض و ontogeny يغيران المظهر الأيضي، فإن التغييرات لا ترتبط باستجابات النمو الملحوظة.

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    Authors: Saleh Alseekh; Annabella Klemmer; Jianbing Yan; Tingting Guo; +1 Authors

    The dual challenges of global population explosion and environmental deterioration represent major hurdles for 21st Century agriculture culminating in an unprecedented demand for food security. In this Review, we revisit historical concepts of plasticity and canalization before integrating them with contemporary studies of genotype-environment interactions (G×E) that are currently being carried out at the genome-wide level. In doing so we address both fundamental questions regarding G×E and potential strategies to best secure yields in both current and future climate scenarios.

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    The dual challenges of global population explosion and environmental deterioration represent major hurdles for 21st Century agriculture culminating in an unprecedented demand for food security. In this Review, we revisit historical concepts of plasticity and canalization before integrating them with contemporary studies of genotype-environment interactions (G×E) that are currently being carried out at the genome-wide level. In doing so we address both fundamental questions regarding G×E and potential strategies to best secure yields in both current and future climate scenarios.

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    Authors: Yuming Sun; Alisdair R. Fernie;

    Climate changes have unpredictable effects on ecosystems and agriculture. Plants adapt metabolically to overcome these challenges, with plant secondary metabolites (PSMs) being crucial for plant-environment interactions. Thus, understanding how PSMs respond to climate change is vital for future cultivation and breeding strategies. Here, we review PSM responses to climate changes such as elevated carbon dioxide, ozone, nitrogen deposition, heat and drought, as well as a combinations of different factors. These responses are complex, depending on stress dosage and duration, and metabolite classes. We finally identify mechanisms by which climate change affects PSM production ecologically and molecularly. While these observations provide insights into PSM responses to climate changes and the underlying regulatory mechanisms, considerable further research is required for a comprehensive understanding.

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    Authors: Yuming Sun; Alisdair R. Fernie;

    Climate changes have unpredictable effects on ecosystems and agriculture. Plants adapt metabolically to overcome these challenges, with plant secondary metabolites (PSMs) being crucial for plant-environment interactions. Thus, understanding how PSMs respond to climate change is vital for future cultivation and breeding strategies. Here, we review PSM responses to climate changes such as elevated carbon dioxide, ozone, nitrogen deposition, heat and drought, as well as a combinations of different factors. These responses are complex, depending on stress dosage and duration, and metabolite classes. We finally identify mechanisms by which climate change affects PSM production ecologically and molecularly. While these observations provide insights into PSM responses to climate changes and the underlying regulatory mechanisms, considerable further research is required for a comprehensive understanding.

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      Trends in Plant Science
      Article . 2024 . Peer-reviewed
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    Authors: Sandra Marcela Correa; Sandra Marcela Correa; Saleh Alseekh; Zoran Nikoloski; +6 Authors

    SUMMARYEfficient approaches to increase plant lipid production are necessary to meet current industrial demands for this important resource. While Jatropha curcas cell culture can be used for in vitro lipid production, scaling up the system for industrial applications requires an understanding of how growth conditions affect lipid metabolism and yield. Here we present a bottom‐up metabolic reconstruction of J. curcas supported with labeling experiments and biomass characterization under three growth conditions. We show that the metabolic model can accurately predict growth and distribution of fluxes in cell cultures and use these findings to pinpoint energy expenditures that affect lipid biosynthesis and metabolism. In addition, by using constraint‐based modeling approaches we identify network reactions whose joint manipulation optimizes lipid production. The proposed model and computational analyses provide a stepping stone for future rational optimization of other agronomically relevant traits in J. curcas.

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    The Plant Journal
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    The Plant Journal
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    MPG.PuRe
    Article . 2020
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    https://dx.doi.org/10.60692/kv...
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      The Plant Journal
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      The Plant Journal
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      MPG.PuRe
      Article . 2020
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      https://dx.doi.org/10.60692/kv...
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    Authors: Sandra Marcela Correa; Sandra Marcela Correa; Saleh Alseekh; Zoran Nikoloski; +6 Authors

    SUMMARYEfficient approaches to increase plant lipid production are necessary to meet current industrial demands for this important resource. While Jatropha curcas cell culture can be used for in vitro lipid production, scaling up the system for industrial applications requires an understanding of how growth conditions affect lipid metabolism and yield. Here we present a bottom‐up metabolic reconstruction of J. curcas supported with labeling experiments and biomass characterization under three growth conditions. We show that the metabolic model can accurately predict growth and distribution of fluxes in cell cultures and use these findings to pinpoint energy expenditures that affect lipid biosynthesis and metabolism. In addition, by using constraint‐based modeling approaches we identify network reactions whose joint manipulation optimizes lipid production. The proposed model and computational analyses provide a stepping stone for future rational optimization of other agronomically relevant traits in J. curcas.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ The Plant Journalarrow_drop_down
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    The Plant Journal
    Article . 2020 . Peer-reviewed
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    The Plant Journal
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    MPG.PuRe
    Article . 2020
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    https://dx.doi.org/10.60692/kv...
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      The Plant Journal
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      The Plant Journal
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      MPG.PuRe
      Article . 2020
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      https://dx.doi.org/10.60692/kv...
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    Authors: Pérez‐Alfocea, Francisco; Borghi, Monica; Guerrero, Juan José; Jiménez, Antonio R.; +3 Authors

    SUMMARYFood security is threatened by climate change, with heat and drought being the main stresses affecting crop physiology and ecosystem services, such as plant–pollinator interactions. We hypothesize that tracking and ranking pollinators' preferences for flowers under environmental pressure could be used as a marker of plant quality for agricultural breeding to increase crop stress tolerance. Despite increasing relevance of flowers as the most stress sensitive organs, phenotyping platforms aim at identifying traits of resilience by assessing the plant physiological status through remote sensing‐assisted vegetative indexes, but find strong bottlenecks in quantifying flower traits and in accurate genotype‐to‐phenotype prediction. However, as the transport of photoassimilates from leaves (sources) to flowers (sinks) is reduced in low‐resilient plants, flowers are better indicators than leaves of plant well‐being. Indeed, the chemical composition and amount of pollen and nectar that flowers produce, which ultimately serve as food resources for pollinators, change in response to environmental cues. Therefore, pollinators' preferences could be used as a measure of functional source‐to‐sink relationships for breeding decisions. To achieve this challenging goal, we propose to develop a pollinator‐assisted phenotyping and selection platform for automated quantification of Genotype × Environment × Pollinator interactions through an insect geo‐positioning system. Pollinator‐assisted selection can be validated by metabolic, transcriptomic, and ionomic traits, and mapping of candidate genes, linking floral and leaf traits, pollinator preferences, plant resilience, and crop productivity. This radical new approach can change the current paradigm of plant phenotyping and find new paths for crop redomestication and breeding assisted by ecological decisions.

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    The Plant Journal
    Article . 2024 . Peer-reviewed
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    DIGITAL.CSIC
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    ZENODO
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    ZENODO
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      The Plant Journal
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    Authors: Pérez‐Alfocea, Francisco; Borghi, Monica; Guerrero, Juan José; Jiménez, Antonio R.; +3 Authors

    SUMMARYFood security is threatened by climate change, with heat and drought being the main stresses affecting crop physiology and ecosystem services, such as plant–pollinator interactions. We hypothesize that tracking and ranking pollinators' preferences for flowers under environmental pressure could be used as a marker of plant quality for agricultural breeding to increase crop stress tolerance. Despite increasing relevance of flowers as the most stress sensitive organs, phenotyping platforms aim at identifying traits of resilience by assessing the plant physiological status through remote sensing‐assisted vegetative indexes, but find strong bottlenecks in quantifying flower traits and in accurate genotype‐to‐phenotype prediction. However, as the transport of photoassimilates from leaves (sources) to flowers (sinks) is reduced in low‐resilient plants, flowers are better indicators than leaves of plant well‐being. Indeed, the chemical composition and amount of pollen and nectar that flowers produce, which ultimately serve as food resources for pollinators, change in response to environmental cues. Therefore, pollinators' preferences could be used as a measure of functional source‐to‐sink relationships for breeding decisions. To achieve this challenging goal, we propose to develop a pollinator‐assisted phenotyping and selection platform for automated quantification of Genotype × Environment × Pollinator interactions through an insect geo‐positioning system. Pollinator‐assisted selection can be validated by metabolic, transcriptomic, and ionomic traits, and mapping of candidate genes, linking floral and leaf traits, pollinator preferences, plant resilience, and crop productivity. This radical new approach can change the current paradigm of plant phenotyping and find new paths for crop redomestication and breeding assisted by ecological decisions.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ The Plant Journalarrow_drop_down
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    The Plant Journal
    Article . 2024 . Peer-reviewed
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    Article . 2024 . Peer-reviewed
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      The Plant Journal
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    Authors: Yuming Sun; Saleh Alseekh; Alisdair R. Fernie;

    AbstractPlant secondary metabolites (SMs) play crucial roles in plant‐environment interactions and contribute greatly to human health. Global climate changes are expected to dramatically affect plant secondary metabolism, yet a systematic understanding of such influences is still lacking. Here, we employed medicinal and aromatic plants (MAAPs) as model plant taxa and performed a meta‐analysis from 360 publications using 1828 paired observations to assess the responses of different SMs levels and the accompanying plant traits to elevated carbon dioxide (eCO2), elevated temperature (eT), elevated nitrogen deposition (eN) and decreased precipitation (dP). The overall results showed that phenolic and terpenoid levels generally respond positively to eCO2 but negatively to eN, while the total alkaloid concentration was increased remarkably by eN. By contrast, dP promotes the levels of all SMs, while eT exclusively exerts a positive influence on the levels of phenolic compounds. Further analysis highlighted the dependence of SM responses on different moderators such as plant functional types, climate change levels or exposure durations, mean annual temperature and mean annual precipitation. Moreover, plant phenolic and terpenoid responses to climate changes could be attributed to the variations of C/N ratio and total soluble sugar levels, while the trade‐off supposition contributed to SM responses to climate changes other than eCO2. Taken together, our results predicted the distinctive SM responses to diverse climate changes in MAAPs and allowed us to define potential moderators responsible for these variations. Further, linking SM responses to C‐N metabolism and growth‐defence balance provided biological understandings in terms of plant secondary metabolic regulation.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Global Change Biolog...arrow_drop_down
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    Global Change Biology
    Article . 2022 . Peer-reviewed
    License: CC BY NC
    Data sources: Crossref
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Global Change Biolog...arrow_drop_down
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      Global Change Biology
      Article . 2022 . Peer-reviewed
      License: CC BY NC
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    Authors: Yuming Sun; Saleh Alseekh; Alisdair R. Fernie;

    AbstractPlant secondary metabolites (SMs) play crucial roles in plant‐environment interactions and contribute greatly to human health. Global climate changes are expected to dramatically affect plant secondary metabolism, yet a systematic understanding of such influences is still lacking. Here, we employed medicinal and aromatic plants (MAAPs) as model plant taxa and performed a meta‐analysis from 360 publications using 1828 paired observations to assess the responses of different SMs levels and the accompanying plant traits to elevated carbon dioxide (eCO2), elevated temperature (eT), elevated nitrogen deposition (eN) and decreased precipitation (dP). The overall results showed that phenolic and terpenoid levels generally respond positively to eCO2 but negatively to eN, while the total alkaloid concentration was increased remarkably by eN. By contrast, dP promotes the levels of all SMs, while eT exclusively exerts a positive influence on the levels of phenolic compounds. Further analysis highlighted the dependence of SM responses on different moderators such as plant functional types, climate change levels or exposure durations, mean annual temperature and mean annual precipitation. Moreover, plant phenolic and terpenoid responses to climate changes could be attributed to the variations of C/N ratio and total soluble sugar levels, while the trade‐off supposition contributed to SM responses to climate changes other than eCO2. Taken together, our results predicted the distinctive SM responses to diverse climate changes in MAAPs and allowed us to define potential moderators responsible for these variations. Further, linking SM responses to C‐N metabolism and growth‐defence balance provided biological understandings in terms of plant secondary metabolic regulation.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Global Change Biolog...arrow_drop_down
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    Global Change Biology
    Article . 2022 . Peer-reviewed
    License: CC BY NC
    Data sources: Crossref
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Global Change Biolog...arrow_drop_down
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      Global Change Biology
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