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description Publicationkeyboard_double_arrow_right Article , Other literature type , Journal 2019Embargo end date: 01 Jan 2019 United States, Australia, Switzerland, United StatesPublisher:Springer Science and Business Media LLC Funded by:NSF | Ecology and biogeochemica...NSF| Ecology and biogeochemical impacts of DNA and RNA viruses throughout the global oceansVirginia I. Rich; David M. Karl; David S. Reay; Christine M. Foreman; Jennifer B. H. Martiny; Victoria J. Orphan; Philip W. Boyd; Brajesh K. Singh; Lisa Y. Stein; Britt Koskella; Eric A. Webb; Matthew B. Sullivan; Justin V. Remais; Matthew Baylis; Scott C. Weaver; David B. Mark Welch; Madeleine J. H. van Oppen; Madeleine J. H. van Oppen; Antje Boetius; Thomas W. Crowther; Janet K. Jansson; William J. Ripple; Roberto Danovaro; Kenneth N. Timmis; Jef Huisman; Aimée T. Classen; Mary Ann Moran; Lars R. Bakken; Frank J. Stewart; Ricardo Cavicchioli; Nicole S. Webster; Nicole S. Webster; Michael J. Behrenfeld; David A. Hutchins; Farooq Azam;pmid: 31213707
pmc: PMC7136171
In the Anthropocene, in which we now live, climate change is impacting most life on Earth. Microorganisms support the existence of all higher trophic life forms. To understand how humans and other life forms on Earth (including those we are yet to discover) can withstand anthropogenic climate change, it is vital to incorporate knowledge of the microbial ‘unseen majority’. We must learn not just how microorganisms affect climate change (including production and consumption of greenhouse gases) but also how they will be affected by climate change and other human activities. This Consensus Statement documents the central role and global importance of microorganisms in climate change biology. It also puts humanity on notice that the impact of climate change will depend heavily on responses of microorganisms, which are essential for achieving an environmentally sustainable future. Nature Reviews Microbiology, 17 (9) ISSN:1740-1526 ISSN:1740-1534
Caltech Authors (Cal... arrow_drop_down Caltech Authors (California Institute of Technology)Article . 2019Full-Text: https://doi.org/10.1038/s41579-019-0222-5Data sources: Bielefeld Academic Search Engine (BASE)The University of Melbourne: Digital RepositoryArticle . 2019License: CC BYFull-Text: http://hdl.handle.net/11343/249800Data sources: Bielefeld Academic Search Engine (BASE)Nature Reviews MicrobiologyOther literature type . 2019Data sources: DANS (Data Archiving and Networked Services)University of Western Sydney (UWS): Research DirectArticle . 2019License: CC BYData sources: Bielefeld Academic Search Engine (BASE)University of Tasmania: UTas ePrintsArticle . 2019Data sources: Bielefeld Academic Search Engine (BASE)The University of Queensland: UQ eSpaceArticle . 2019Data sources: Bielefeld Academic Search Engine (BASE)add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1038/s41579-019-0222-5&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess RoutesGreen hybrid 1K citations 1,263 popularity Top 0.01% influence Top 1% impulse Top 0.01% Powered by BIP!
more_vert Caltech Authors (Cal... arrow_drop_down Caltech Authors (California Institute of Technology)Article . 2019Full-Text: https://doi.org/10.1038/s41579-019-0222-5Data sources: Bielefeld Academic Search Engine (BASE)The University of Melbourne: Digital RepositoryArticle . 2019License: CC BYFull-Text: http://hdl.handle.net/11343/249800Data sources: Bielefeld Academic Search Engine (BASE)Nature Reviews MicrobiologyOther literature type . 2019Data sources: DANS (Data Archiving and Networked Services)University of Western Sydney (UWS): Research DirectArticle . 2019License: CC BYData sources: Bielefeld Academic Search Engine (BASE)University of Tasmania: UTas ePrintsArticle . 2019Data sources: Bielefeld Academic Search Engine (BASE)The University of Queensland: UQ eSpaceArticle . 2019Data sources: Bielefeld Academic Search Engine (BASE)add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1038/s41579-019-0222-5&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article 2022 Germany, Finland, United StatesPublisher:Wiley Funded by:NSF | Collaborative Research: A..., EC | Nunataryuk, NSF | CAREER: A research found... +9 projectsNSF| Collaborative Research: Arctic Stream Networks as Nutrient Sensors in Permafrost Ecosystems ,EC| Nunataryuk ,NSF| CAREER: A research foundation to improve understanding of the post-thaw permafrost microbiome via collaboration networks and experiential learning ,NSF| Collaborative Research: Research, Synthesis, and Knowledge Transfer in a Changing Arctic: Science Support for the Study of Environmental Arctic Change (SEARCH) ,NSF| BII-Implementation: The EMERGE Institute: Identifying EMergent Ecosystem Responses through Genes-to-Ecosystems Integration ,NSF| Methane release from thermokarst lakes: Thresholds and feedbacks in the lake to watershed hydrology-permafrost system ,UKRI| Accelerating Detection of Disease Core Programme (1 April 2023 onwards) ,AKA| Towards constraining the circumarctic nitrous oxide budget (NOCA) ,NSF| DIMENSIONS: COLLABORATIVE RESEARCH: GENETIC, PHYLOGENETIC, AND FUNCTIONAL MICROBIAL DIVERSITY IN PERMANENTLY FROZEN AQUATIC SEDIMENTS OVER GEOLOGICAL TIME ,NSF| Collaborative Research: Permafrost Carbon Network: Synthesizing flux observations for benchmarking model projections of permafrost carbon exchange ,AKA| Microbial mechanisms regulating N2O metabolism in above-ground vegetation - significant northern N2O sink? ,AKA| Ammonia oxidizing microbes and factors regulating their occurrence and activity in acidic boreal and Arctic peat soilsErnakovich, J.; Barbato, R.; Rich, V.; Schädel, C.; Hewitt, R.; Doherty, S.; Whalen, E.; Abbott, B.; Barta, J.; Biasi, C.; Chabot, C.; Hultman, J.; Knoblauch, C.; Vetter, M.; Leewis, M.; Liebner, S.; Mackelprang, R.; Onstott, T.; Richter, A.; Schütte, U.; Siljanen, H.; Taş., N.; Timling, I.; Vishnivetskaya, T.; Waldrop, M.; Winkel, M.;pmid: 35722720
pmc: PMC9541943
AbstractThe physical and chemical changes that accompany permafrost thaw directly influence the microbial communities that mediate the decomposition of formerly frozen organic matter, leading to uncertainty in permafrost–climate feedbacks. Although changes to microbial metabolism and community structure are documented following thaw, the generality of post‐thaw assembly patterns across permafrost soils of the world remains uncertain, limiting our ability to predict biogeochemistry and microbial community responses to climate change. Based on our review of the Arctic microbiome, permafrost microbiology, and community ecology, we propose that Assembly Theory provides a framework to better understand thaw‐mediated microbiome changes and the implications for community function and climate feedbacks. This framework posits that the prevalence of deterministic or stochastic processes indicates whether the community is well‐suited to thrive in changing environmental conditions. We predict that on a short timescale and following high‐disturbance thaw (e.g., thermokarst), stochasticity dominates post‐thaw microbiome assembly, suggesting that functional predictions will be aided by detailed information about the microbiome. At a longer timescale and lower‐intensity disturbance (e.g., active layer deepening), deterministic processes likely dominate, making environmental parameters sufficient for predicting function. We propose that the contribution of stochastic and deterministic processes to post‐thaw microbiome assembly depends on the characteristics of the thaw disturbance, as well as characteristics of the microbial community, such as the ecological and phylogenetic breadth of functional guilds, their functional redundancy, and biotic interactions. These propagate across space and time, potentially providing a means for predicting the microbial forcing of greenhouse gas feedbacks to global climate change.
GFZpublic (German Re... arrow_drop_down GFZpublic (German Research Centre for Geosciences, Helmholtz-Zentrum Potsdam)Article . 2022License: CC BYData sources: Bielefeld Academic Search Engine (BASE)add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1111/gcb.16231&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess RoutesGreen hybrid 46 citations 46 popularity Top 1% influence Average impulse Top 1% Powered by BIP!
visibility 38visibility views 38 download downloads 66 Powered bymore_vert GFZpublic (German Re... arrow_drop_down GFZpublic (German Research Centre for Geosciences, Helmholtz-Zentrum Potsdam)Article . 2022License: CC BYData sources: Bielefeld Academic Search Engine (BASE)add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1111/gcb.16231&type=result"></script>'); --> </script>
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description Publicationkeyboard_double_arrow_right Article , Other literature type , Journal 2019Embargo end date: 01 Jan 2019 United States, Australia, Switzerland, United StatesPublisher:Springer Science and Business Media LLC Funded by:NSF | Ecology and biogeochemica...NSF| Ecology and biogeochemical impacts of DNA and RNA viruses throughout the global oceansVirginia I. Rich; David M. Karl; David S. Reay; Christine M. Foreman; Jennifer B. H. Martiny; Victoria J. Orphan; Philip W. Boyd; Brajesh K. Singh; Lisa Y. Stein; Britt Koskella; Eric A. Webb; Matthew B. Sullivan; Justin V. Remais; Matthew Baylis; Scott C. Weaver; David B. Mark Welch; Madeleine J. H. van Oppen; Madeleine J. H. van Oppen; Antje Boetius; Thomas W. Crowther; Janet K. Jansson; William J. Ripple; Roberto Danovaro; Kenneth N. Timmis; Jef Huisman; Aimée T. Classen; Mary Ann Moran; Lars R. Bakken; Frank J. Stewart; Ricardo Cavicchioli; Nicole S. Webster; Nicole S. Webster; Michael J. Behrenfeld; David A. Hutchins; Farooq Azam;pmid: 31213707
pmc: PMC7136171
In the Anthropocene, in which we now live, climate change is impacting most life on Earth. Microorganisms support the existence of all higher trophic life forms. To understand how humans and other life forms on Earth (including those we are yet to discover) can withstand anthropogenic climate change, it is vital to incorporate knowledge of the microbial ‘unseen majority’. We must learn not just how microorganisms affect climate change (including production and consumption of greenhouse gases) but also how they will be affected by climate change and other human activities. This Consensus Statement documents the central role and global importance of microorganisms in climate change biology. It also puts humanity on notice that the impact of climate change will depend heavily on responses of microorganisms, which are essential for achieving an environmentally sustainable future. Nature Reviews Microbiology, 17 (9) ISSN:1740-1526 ISSN:1740-1534
Caltech Authors (Cal... arrow_drop_down Caltech Authors (California Institute of Technology)Article . 2019Full-Text: https://doi.org/10.1038/s41579-019-0222-5Data sources: Bielefeld Academic Search Engine (BASE)The University of Melbourne: Digital RepositoryArticle . 2019License: CC BYFull-Text: http://hdl.handle.net/11343/249800Data sources: Bielefeld Academic Search Engine (BASE)Nature Reviews MicrobiologyOther literature type . 2019Data sources: DANS (Data Archiving and Networked Services)University of Western Sydney (UWS): Research DirectArticle . 2019License: CC BYData sources: Bielefeld Academic Search Engine (BASE)University of Tasmania: UTas ePrintsArticle . 2019Data sources: Bielefeld Academic Search Engine (BASE)The University of Queensland: UQ eSpaceArticle . 2019Data sources: Bielefeld Academic Search Engine (BASE)add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1038/s41579-019-0222-5&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess RoutesGreen hybrid 1K citations 1,263 popularity Top 0.01% influence Top 1% impulse Top 0.01% Powered by BIP!
more_vert Caltech Authors (Cal... arrow_drop_down Caltech Authors (California Institute of Technology)Article . 2019Full-Text: https://doi.org/10.1038/s41579-019-0222-5Data sources: Bielefeld Academic Search Engine (BASE)The University of Melbourne: Digital RepositoryArticle . 2019License: CC BYFull-Text: http://hdl.handle.net/11343/249800Data sources: Bielefeld Academic Search Engine (BASE)Nature Reviews MicrobiologyOther literature type . 2019Data sources: DANS (Data Archiving and Networked Services)University of Western Sydney (UWS): Research DirectArticle . 2019License: CC BYData sources: Bielefeld Academic Search Engine (BASE)University of Tasmania: UTas ePrintsArticle . 2019Data sources: Bielefeld Academic Search Engine (BASE)The University of Queensland: UQ eSpaceArticle . 2019Data sources: Bielefeld Academic Search Engine (BASE)add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1038/s41579-019-0222-5&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article 2022 Germany, Finland, United StatesPublisher:Wiley Funded by:NSF | Collaborative Research: A..., EC | Nunataryuk, NSF | CAREER: A research found... +9 projectsNSF| Collaborative Research: Arctic Stream Networks as Nutrient Sensors in Permafrost Ecosystems ,EC| Nunataryuk ,NSF| CAREER: A research foundation to improve understanding of the post-thaw permafrost microbiome via collaboration networks and experiential learning ,NSF| Collaborative Research: Research, Synthesis, and Knowledge Transfer in a Changing Arctic: Science Support for the Study of Environmental Arctic Change (SEARCH) ,NSF| BII-Implementation: The EMERGE Institute: Identifying EMergent Ecosystem Responses through Genes-to-Ecosystems Integration ,NSF| Methane release from thermokarst lakes: Thresholds and feedbacks in the lake to watershed hydrology-permafrost system ,UKRI| Accelerating Detection of Disease Core Programme (1 April 2023 onwards) ,AKA| Towards constraining the circumarctic nitrous oxide budget (NOCA) ,NSF| DIMENSIONS: COLLABORATIVE RESEARCH: GENETIC, PHYLOGENETIC, AND FUNCTIONAL MICROBIAL DIVERSITY IN PERMANENTLY FROZEN AQUATIC SEDIMENTS OVER GEOLOGICAL TIME ,NSF| Collaborative Research: Permafrost Carbon Network: Synthesizing flux observations for benchmarking model projections of permafrost carbon exchange ,AKA| Microbial mechanisms regulating N2O metabolism in above-ground vegetation - significant northern N2O sink? ,AKA| Ammonia oxidizing microbes and factors regulating their occurrence and activity in acidic boreal and Arctic peat soilsErnakovich, J.; Barbato, R.; Rich, V.; Schädel, C.; Hewitt, R.; Doherty, S.; Whalen, E.; Abbott, B.; Barta, J.; Biasi, C.; Chabot, C.; Hultman, J.; Knoblauch, C.; Vetter, M.; Leewis, M.; Liebner, S.; Mackelprang, R.; Onstott, T.; Richter, A.; Schütte, U.; Siljanen, H.; Taş., N.; Timling, I.; Vishnivetskaya, T.; Waldrop, M.; Winkel, M.;pmid: 35722720
pmc: PMC9541943
AbstractThe physical and chemical changes that accompany permafrost thaw directly influence the microbial communities that mediate the decomposition of formerly frozen organic matter, leading to uncertainty in permafrost–climate feedbacks. Although changes to microbial metabolism and community structure are documented following thaw, the generality of post‐thaw assembly patterns across permafrost soils of the world remains uncertain, limiting our ability to predict biogeochemistry and microbial community responses to climate change. Based on our review of the Arctic microbiome, permafrost microbiology, and community ecology, we propose that Assembly Theory provides a framework to better understand thaw‐mediated microbiome changes and the implications for community function and climate feedbacks. This framework posits that the prevalence of deterministic or stochastic processes indicates whether the community is well‐suited to thrive in changing environmental conditions. We predict that on a short timescale and following high‐disturbance thaw (e.g., thermokarst), stochasticity dominates post‐thaw microbiome assembly, suggesting that functional predictions will be aided by detailed information about the microbiome. At a longer timescale and lower‐intensity disturbance (e.g., active layer deepening), deterministic processes likely dominate, making environmental parameters sufficient for predicting function. We propose that the contribution of stochastic and deterministic processes to post‐thaw microbiome assembly depends on the characteristics of the thaw disturbance, as well as characteristics of the microbial community, such as the ecological and phylogenetic breadth of functional guilds, their functional redundancy, and biotic interactions. These propagate across space and time, potentially providing a means for predicting the microbial forcing of greenhouse gas feedbacks to global climate change.
GFZpublic (German Re... arrow_drop_down GFZpublic (German Research Centre for Geosciences, Helmholtz-Zentrum Potsdam)Article . 2022License: CC BYData sources: Bielefeld Academic Search Engine (BASE)add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1111/gcb.16231&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess RoutesGreen hybrid 46 citations 46 popularity Top 1% influence Average impulse Top 1% Powered by BIP!
visibility 38visibility views 38 download downloads 66 Powered bymore_vert GFZpublic (German Re... arrow_drop_down GFZpublic (German Research Centre for Geosciences, Helmholtz-Zentrum Potsdam)Article . 2022License: CC BYData sources: Bielefeld Academic Search Engine (BASE)add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1111/gcb.16231&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eu