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description Publicationkeyboard_double_arrow_right Article , Other literature type , Journal , Research , Report 2021 United Kingdom, Norway, NorwayPublisher:Cold Spring Harbor Laboratory Funded by:UKRI | Science and Solutions for...UKRI| Science and Solutions for a Changing Planet (SSCP) DTPAuthors:Ilan Kelman;
Ilan Kelman;Ilan Kelman
Ilan Kelman in OpenAIRENathan Green;
Kris A. Murray; +4 AuthorsNathan Green
Nathan Green in OpenAIREIlan Kelman;
Ilan Kelman;Ilan Kelman
Ilan Kelman in OpenAIRENathan Green;
Kris A. Murray; Kris A. Murray;Nathan Green
Nathan Green in OpenAIREGina E C Charnley;
Gina E C Charnley
Gina E C Charnley in OpenAIREWes Hinsley;
Wes Hinsley
Wes Hinsley in OpenAIREKaty A. M. Gaythorpe;
Katy A. M. Gaythorpe
Katy A. M. Gaythorpe in OpenAIREdoi: 10.1101/2021.07.16.21260629 , 10.1186/s12879-021-06856-4 , 10.60692/5mkza-8zh70 , 10.60692/1qtfx-n1949
pmid: 34809609
pmc: PMC8609751
handle: 11250/2835695 , 10044/1/92875 , 10044/1/92687
doi: 10.1101/2021.07.16.21260629 , 10.1186/s12879-021-06856-4 , 10.60692/5mkza-8zh70 , 10.60692/1qtfx-n1949
pmid: 34809609
pmc: PMC8609751
handle: 11250/2835695 , 10044/1/92875 , 10044/1/92687
AbstractBackgroundTemperature and precipitation are known to affectVibrio choleraeoutbreaks. Despite this, the impact of drought on outbreaks has been largely understudied. Africa is both drought and cholera prone and more research is needed in Africa to understand cholera dynamics in relation to drought.MethodsHere, we analyse a range of environmental and socioeconomic covariates and fit generalised linear models to publicly available national data, to test for associations with several indices of drought and make cholera outbreak projections to 2070 under three scenarios of global change, reflecting varying trajectories of CO2emissions, socio-economic development, and population growth.ResultsThe best-fit model implies that drought is a significant risk factor for African cholera outbreaks, alongside positive effects of population, temperature and poverty and a negative effect of freshwater withdrawal. The projections show that following stringent emissions pathways and expanding sustainable development may reduce cholera outbreak occurrence in Africa, although these changes were spatially heterogeneous.ConclusionsDespite an effect of drought in explaining recent cholera outbreaks, future projections highlighted the potential for sustainable development gains to offset drought-related impacts on cholera risk. Future work should build on this research investigating the impacts of drought on cholera on a finer spatial scale and potential non-linear relationships, especially in high-burden countries which saw little cholera change in the scenario analysis.
Imperial College Lon... arrow_drop_down Imperial College London: SpiralReport . 2021License: CC BYFull-Text: http://hdl.handle.net/10044/1/92875Data sources: Bielefeld Academic Search Engine (BASE)Imperial College London: SpiralArticle . 2021Full-Text: http://hdl.handle.net/10044/1/92687Data sources: Bielefeld Academic Search Engine (BASE)Spiral - Imperial College Digital RepositoryArticle . 2021Data sources: Spiral - Imperial College Digital RepositorySpiral - Imperial College Digital RepositoryResearch . 2021License: CC BYData sources: Spiral - Imperial College Digital Repositoryadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1101/2021.07.16.21260629&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eu16 citations 16 popularity Top 10% influence Top 10% impulse Top 10% Powered by BIP!
more_vert Imperial College Lon... arrow_drop_down Imperial College London: SpiralReport . 2021License: CC BYFull-Text: http://hdl.handle.net/10044/1/92875Data sources: Bielefeld Academic Search Engine (BASE)Imperial College London: SpiralArticle . 2021Full-Text: http://hdl.handle.net/10044/1/92687Data sources: Bielefeld Academic Search Engine (BASE)Spiral - Imperial College Digital RepositoryArticle . 2021Data sources: Spiral - Imperial College Digital RepositorySpiral - Imperial College Digital RepositoryResearch . 2021License: CC BYData sources: Spiral - Imperial College Digital Repositoryadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1101/2021.07.16.21260629&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article , Other literature type , Journal , Research , Report 2021 United Kingdom, Norway, NorwayPublisher:Cold Spring Harbor Laboratory Funded by:UKRI | Science and Solutions for...UKRI| Science and Solutions for a Changing Planet (SSCP) DTPAuthors:Ilan Kelman;
Ilan Kelman;Ilan Kelman
Ilan Kelman in OpenAIRENathan Green;
Kris A. Murray; +4 AuthorsNathan Green
Nathan Green in OpenAIREIlan Kelman;
Ilan Kelman;Ilan Kelman
Ilan Kelman in OpenAIRENathan Green;
Kris A. Murray; Kris A. Murray;Nathan Green
Nathan Green in OpenAIREGina E C Charnley;
Gina E C Charnley
Gina E C Charnley in OpenAIREWes Hinsley;
Wes Hinsley
Wes Hinsley in OpenAIREKaty A. M. Gaythorpe;
Katy A. M. Gaythorpe
Katy A. M. Gaythorpe in OpenAIREdoi: 10.1101/2021.07.16.21260629 , 10.1186/s12879-021-06856-4 , 10.60692/5mkza-8zh70 , 10.60692/1qtfx-n1949
pmid: 34809609
pmc: PMC8609751
handle: 11250/2835695 , 10044/1/92875 , 10044/1/92687
doi: 10.1101/2021.07.16.21260629 , 10.1186/s12879-021-06856-4 , 10.60692/5mkza-8zh70 , 10.60692/1qtfx-n1949
pmid: 34809609
pmc: PMC8609751
handle: 11250/2835695 , 10044/1/92875 , 10044/1/92687
AbstractBackgroundTemperature and precipitation are known to affectVibrio choleraeoutbreaks. Despite this, the impact of drought on outbreaks has been largely understudied. Africa is both drought and cholera prone and more research is needed in Africa to understand cholera dynamics in relation to drought.MethodsHere, we analyse a range of environmental and socioeconomic covariates and fit generalised linear models to publicly available national data, to test for associations with several indices of drought and make cholera outbreak projections to 2070 under three scenarios of global change, reflecting varying trajectories of CO2emissions, socio-economic development, and population growth.ResultsThe best-fit model implies that drought is a significant risk factor for African cholera outbreaks, alongside positive effects of population, temperature and poverty and a negative effect of freshwater withdrawal. The projections show that following stringent emissions pathways and expanding sustainable development may reduce cholera outbreak occurrence in Africa, although these changes were spatially heterogeneous.ConclusionsDespite an effect of drought in explaining recent cholera outbreaks, future projections highlighted the potential for sustainable development gains to offset drought-related impacts on cholera risk. Future work should build on this research investigating the impacts of drought on cholera on a finer spatial scale and potential non-linear relationships, especially in high-burden countries which saw little cholera change in the scenario analysis.
Imperial College Lon... arrow_drop_down Imperial College London: SpiralReport . 2021License: CC BYFull-Text: http://hdl.handle.net/10044/1/92875Data sources: Bielefeld Academic Search Engine (BASE)Imperial College London: SpiralArticle . 2021Full-Text: http://hdl.handle.net/10044/1/92687Data sources: Bielefeld Academic Search Engine (BASE)Spiral - Imperial College Digital RepositoryArticle . 2021Data sources: Spiral - Imperial College Digital RepositorySpiral - Imperial College Digital RepositoryResearch . 2021License: CC BYData sources: Spiral - Imperial College Digital Repositoryadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1101/2021.07.16.21260629&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eu16 citations 16 popularity Top 10% influence Top 10% impulse Top 10% Powered by BIP!
more_vert Imperial College Lon... arrow_drop_down Imperial College London: SpiralReport . 2021License: CC BYFull-Text: http://hdl.handle.net/10044/1/92875Data sources: Bielefeld Academic Search Engine (BASE)Imperial College London: SpiralArticle . 2021Full-Text: http://hdl.handle.net/10044/1/92687Data sources: Bielefeld Academic Search Engine (BASE)Spiral - Imperial College Digital RepositoryArticle . 2021Data sources: Spiral - Imperial College Digital RepositorySpiral - Imperial College Digital RepositoryResearch . 2021License: CC BYData sources: Spiral - Imperial College Digital Repositoryadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1101/2021.07.16.21260629&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article , Conference object , Other literature type , Journal , Preprint 2020 United KingdomPublisher:Cold Spring Harbor Laboratory Funded by:UKRI | MRC Centre for Global Inf...UKRI| MRC Centre for Global Infectious Disease AnalysisAuthors:Katy AM Gaythorpe;
Katy AM Gaythorpe
Katy AM Gaythorpe in OpenAIREArran Hamlet;
Laurence Cibrelus; Tini Garske; +1 AuthorsArran Hamlet
Arran Hamlet in OpenAIREKaty AM Gaythorpe;
Katy AM Gaythorpe
Katy AM Gaythorpe in OpenAIREArran Hamlet;
Laurence Cibrelus; Tini Garske; Neil M Ferguson;Arran Hamlet
Arran Hamlet in OpenAIREAbstractYellow Fever (YF) is an arbovirus capable of causing haemorrhagic fever which is endemic in tropical regions of Africa and South America. In recent years, it has resurged – leading to large outbreaks and expanding its endemic zone, the causes of which are unknown. In Africa, the disease is currently considered endemic in 34 countries where it is estimated to cause 78,000 deaths a year. As the mosquito vectors of YF sensitive to environmental conditions, climate change may have substantial effects on the transmission of YF. Here we present the first analysis of the potential impact of climate change on YF transmission and disease burden. We extend an existing model of YF transmission in Africa to account for rainfall and a temperature suitability index. From this, we project transmission intensity across the African endemic region in the context of four climate change scenarios (representative concentration pathways (RCPs) 2.6, 4.5, 6.0 and 8.5). We use these transmission projections to assess the change from current to future disease burden in 2050 and 2070 for each emission scenario. We find that disease burden changes heterogeneously with temperature and rainfall across the region. In RCP 2.6, we find a 93.0% [95% CI 92.7, 93.2%] chance that deaths will increase in 2050. We find that the annual expected number of deaths may increase by between 10.8% [95% CrI -2.4, 37.9%] for RCP 2.6 and 24.9% [95% CrI -2.2, 88.3%] for RCP 8.5 in 2050, with the most notable changes occurring in East and Central Africa. Changes in temperature and rainfall will affect the transmission dynamics of YF. Such a change in epidemiology will complicate future control efforts. As such, we may need to consider the effect of changing climactic variables on future intervention strategies.
medRxiv arrow_drop_down Imperial College London: SpiralArticle . 2020License: CC BYFull-Text: http://hdl.handle.net/10044/1/84560Data sources: Bielefeld Academic Search Engine (BASE)Spiral - Imperial College Digital RepositoryArticle . 2020License: CC BYData sources: Spiral - Imperial College Digital Repositoryadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1101/2020.02.25.20026369&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess RoutesGreen gold 32 citations 32 popularity Top 10% influence Top 10% impulse Top 10% Powered by BIP!
more_vert medRxiv arrow_drop_down Imperial College London: SpiralArticle . 2020License: CC BYFull-Text: http://hdl.handle.net/10044/1/84560Data sources: Bielefeld Academic Search Engine (BASE)Spiral - Imperial College Digital RepositoryArticle . 2020License: CC BYData sources: Spiral - Imperial College Digital Repositoryadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1101/2020.02.25.20026369&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article , Conference object , Other literature type , Journal , Preprint 2020 United KingdomPublisher:Cold Spring Harbor Laboratory Funded by:UKRI | MRC Centre for Global Inf...UKRI| MRC Centre for Global Infectious Disease AnalysisAuthors:Katy AM Gaythorpe;
Katy AM Gaythorpe
Katy AM Gaythorpe in OpenAIREArran Hamlet;
Laurence Cibrelus; Tini Garske; +1 AuthorsArran Hamlet
Arran Hamlet in OpenAIREKaty AM Gaythorpe;
Katy AM Gaythorpe
Katy AM Gaythorpe in OpenAIREArran Hamlet;
Laurence Cibrelus; Tini Garske; Neil M Ferguson;Arran Hamlet
Arran Hamlet in OpenAIREAbstractYellow Fever (YF) is an arbovirus capable of causing haemorrhagic fever which is endemic in tropical regions of Africa and South America. In recent years, it has resurged – leading to large outbreaks and expanding its endemic zone, the causes of which are unknown. In Africa, the disease is currently considered endemic in 34 countries where it is estimated to cause 78,000 deaths a year. As the mosquito vectors of YF sensitive to environmental conditions, climate change may have substantial effects on the transmission of YF. Here we present the first analysis of the potential impact of climate change on YF transmission and disease burden. We extend an existing model of YF transmission in Africa to account for rainfall and a temperature suitability index. From this, we project transmission intensity across the African endemic region in the context of four climate change scenarios (representative concentration pathways (RCPs) 2.6, 4.5, 6.0 and 8.5). We use these transmission projections to assess the change from current to future disease burden in 2050 and 2070 for each emission scenario. We find that disease burden changes heterogeneously with temperature and rainfall across the region. In RCP 2.6, we find a 93.0% [95% CI 92.7, 93.2%] chance that deaths will increase in 2050. We find that the annual expected number of deaths may increase by between 10.8% [95% CrI -2.4, 37.9%] for RCP 2.6 and 24.9% [95% CrI -2.2, 88.3%] for RCP 8.5 in 2050, with the most notable changes occurring in East and Central Africa. Changes in temperature and rainfall will affect the transmission dynamics of YF. Such a change in epidemiology will complicate future control efforts. As such, we may need to consider the effect of changing climactic variables on future intervention strategies.
medRxiv arrow_drop_down Imperial College London: SpiralArticle . 2020License: CC BYFull-Text: http://hdl.handle.net/10044/1/84560Data sources: Bielefeld Academic Search Engine (BASE)Spiral - Imperial College Digital RepositoryArticle . 2020License: CC BYData sources: Spiral - Imperial College Digital Repositoryadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1101/2020.02.25.20026369&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euAccess RoutesGreen gold 32 citations 32 popularity Top 10% influence Top 10% impulse Top 10% Powered by BIP!
more_vert medRxiv arrow_drop_down Imperial College London: SpiralArticle . 2020License: CC BYFull-Text: http://hdl.handle.net/10044/1/84560Data sources: Bielefeld Academic Search Engine (BASE)Spiral - Imperial College Digital RepositoryArticle . 2020License: CC BYData sources: Spiral - Imperial College Digital Repositoryadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1101/2020.02.25.20026369&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article , Other literature type 2022 Norway, United Kingdom, NorwayPublisher:Cold Spring Harbor Laboratory Funded by:UKRI | MRC Centre for Global Inf..., UKRI | Science and Solutions for...UKRI| MRC Centre for Global Infectious Disease Analysis ,UKRI| Science and Solutions for a Changing Planet (SSCP) DTPAuthors:Gina E C Charnley;
Sebastian Yennan;Gina E C Charnley
Gina E C Charnley in OpenAIREChinwe Lucia Ochu;
Chinwe Lucia Ochu
Chinwe Lucia Ochu in OpenAIREIlan Kelman;
+2 AuthorsIlan Kelman
Ilan Kelman in OpenAIREGina E C Charnley;
Sebastian Yennan;Gina E C Charnley
Gina E C Charnley in OpenAIREChinwe Lucia Ochu;
Chinwe Lucia Ochu
Chinwe Lucia Ochu in OpenAIREIlan Kelman;
Ilan Kelman
Ilan Kelman in OpenAIREKaty A. M. Gaythorpe;
Katy A. M. Gaythorpe
Katy A. M. Gaythorpe in OpenAIREKris A. Murray;
Kris A. Murray
Kris A. Murray in OpenAIREdoi: 10.1101/2022.03.21.22272693 , 10.1371/journal.pgph.0000869 , 10.60692/m1fje-kss90 , 10.60692/jmdfa-a3s84
pmid: 36962831
pmc: PMC10022205
handle: 11250/3068927 , 10044/1/101645
doi: 10.1101/2022.03.21.22272693 , 10.1371/journal.pgph.0000869 , 10.60692/m1fje-kss90 , 10.60692/jmdfa-a3s84
pmid: 36962831
pmc: PMC10022205
handle: 11250/3068927 , 10044/1/101645
AbstractNigeria currently reports the second highest number of cholera cases in Africa, with numerous socioeconomic and environmental risk factors. Less investigated are the role of extreme events, despite recent work showing their potential importance. To address this gap, we used a machine learning approach to understand the risks and thresholds for cholera outbreaks and extreme events, taking into consideration pre-existing vulnerabilities. We estimated time varying reproductive number (R) from cholera incidence in Nigeria and used a machine learning approach to evaluate its association with extreme events (conflict, flood, drought) and pre-existing vulnerabilities (poverty, sanitation, healthcare). We then created a traffic-light system for cholera outbreak risk, using three hypothetical traffic-light scenarios (Red, Amber and Green) and used this to predict R. The system highlighted potential extreme events and socioeconomic thresholds for outbreaks to occur. We found that reducing poverty and increasing access to sanitation lessened vulnerability to increased cholera risk caused by extreme events (monthly conflicts and the Palmers Drought Severity Index). The main limitation is the underreporting of cholera globally and the potential number of cholera cases missed in the data used here. Increasing access to sanitation and decreasing poverty reduced the impact of extreme events in terms of cholera outbreak risk. The results here therefore add further evidence of the need for sustainable development for disaster prevention and mitigation and to improve health and quality of life.
Imperial College Lon... arrow_drop_down Imperial College London: SpiralArticle . 2022License: CC BYFull-Text: http://hdl.handle.net/10044/1/101645Data sources: Bielefeld Academic Search Engine (BASE)Spiral - Imperial College Digital RepositoryArticle . 2022License: CC BYData sources: Spiral - Imperial College Digital Repositoryadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1101/2022.03.21.22272693&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eu6 citations 6 popularity Top 10% influence Average impulse Top 10% Powered by BIP!
more_vert Imperial College Lon... arrow_drop_down Imperial College London: SpiralArticle . 2022License: CC BYFull-Text: http://hdl.handle.net/10044/1/101645Data sources: Bielefeld Academic Search Engine (BASE)Spiral - Imperial College Digital RepositoryArticle . 2022License: CC BYData sources: Spiral - Imperial College Digital Repositoryadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1101/2022.03.21.22272693&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eudescription Publicationkeyboard_double_arrow_right Article , Other literature type 2022 Norway, United Kingdom, NorwayPublisher:Cold Spring Harbor Laboratory Funded by:UKRI | MRC Centre for Global Inf..., UKRI | Science and Solutions for...UKRI| MRC Centre for Global Infectious Disease Analysis ,UKRI| Science and Solutions for a Changing Planet (SSCP) DTPAuthors:Gina E C Charnley;
Sebastian Yennan;Gina E C Charnley
Gina E C Charnley in OpenAIREChinwe Lucia Ochu;
Chinwe Lucia Ochu
Chinwe Lucia Ochu in OpenAIREIlan Kelman;
+2 AuthorsIlan Kelman
Ilan Kelman in OpenAIREGina E C Charnley;
Sebastian Yennan;Gina E C Charnley
Gina E C Charnley in OpenAIREChinwe Lucia Ochu;
Chinwe Lucia Ochu
Chinwe Lucia Ochu in OpenAIREIlan Kelman;
Ilan Kelman
Ilan Kelman in OpenAIREKaty A. M. Gaythorpe;
Katy A. M. Gaythorpe
Katy A. M. Gaythorpe in OpenAIREKris A. Murray;
Kris A. Murray
Kris A. Murray in OpenAIREdoi: 10.1101/2022.03.21.22272693 , 10.1371/journal.pgph.0000869 , 10.60692/m1fje-kss90 , 10.60692/jmdfa-a3s84
pmid: 36962831
pmc: PMC10022205
handle: 11250/3068927 , 10044/1/101645
doi: 10.1101/2022.03.21.22272693 , 10.1371/journal.pgph.0000869 , 10.60692/m1fje-kss90 , 10.60692/jmdfa-a3s84
pmid: 36962831
pmc: PMC10022205
handle: 11250/3068927 , 10044/1/101645
AbstractNigeria currently reports the second highest number of cholera cases in Africa, with numerous socioeconomic and environmental risk factors. Less investigated are the role of extreme events, despite recent work showing their potential importance. To address this gap, we used a machine learning approach to understand the risks and thresholds for cholera outbreaks and extreme events, taking into consideration pre-existing vulnerabilities. We estimated time varying reproductive number (R) from cholera incidence in Nigeria and used a machine learning approach to evaluate its association with extreme events (conflict, flood, drought) and pre-existing vulnerabilities (poverty, sanitation, healthcare). We then created a traffic-light system for cholera outbreak risk, using three hypothetical traffic-light scenarios (Red, Amber and Green) and used this to predict R. The system highlighted potential extreme events and socioeconomic thresholds for outbreaks to occur. We found that reducing poverty and increasing access to sanitation lessened vulnerability to increased cholera risk caused by extreme events (monthly conflicts and the Palmers Drought Severity Index). The main limitation is the underreporting of cholera globally and the potential number of cholera cases missed in the data used here. Increasing access to sanitation and decreasing poverty reduced the impact of extreme events in terms of cholera outbreak risk. The results here therefore add further evidence of the need for sustainable development for disaster prevention and mitigation and to improve health and quality of life.
Imperial College Lon... arrow_drop_down Imperial College London: SpiralArticle . 2022License: CC BYFull-Text: http://hdl.handle.net/10044/1/101645Data sources: Bielefeld Academic Search Engine (BASE)Spiral - Imperial College Digital RepositoryArticle . 2022License: CC BYData sources: Spiral - Imperial College Digital Repositoryadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1101/2022.03.21.22272693&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eu6 citations 6 popularity Top 10% influence Average impulse Top 10% Powered by BIP!
more_vert Imperial College Lon... arrow_drop_down Imperial College London: SpiralArticle . 2022License: CC BYFull-Text: http://hdl.handle.net/10044/1/101645Data sources: Bielefeld Academic Search Engine (BASE)Spiral - Imperial College Digital RepositoryArticle . 2022License: CC BYData sources: Spiral - Imperial College Digital Repositoryadd ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.1101/2022.03.21.22272693&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eu