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  • Energy Research
  • National Science Foundation
  • 15. Life on land
  • 11. Sustainability
  • 2. Zero hunger

  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Stephen C. Sillett; Cameron B. Williams; George W. Koch; Marie E. Antoine;

    Structural and physiological changes that occur as trees grow taller are associated with increased hydraulic constraints on leaf gas exchange, yet it is unclear if leaf-level constraints influence whole-tree growth as trees approach their maximum size. We examined variation in leaf physiology, leaf area to sapwood area ratio (L/S), and annual aboveground growth across a range of tree heights in Eucalyptus regnans. Leaf photosynthetic capacity did not differ among upper crown leaves of individuals 61.1-92.4 m tall. Maximum daily and integrated diurnal stomatal conductance (g s) averaged 36 and 34% higher, respectively, in upper crown leaves of ~60-m-tall, 80-year-old trees than in ~90-m-tall, 300-year-old trees, with larger differences observed on days with a high vapor pressure deficit (VPD). Greater stomatal regulation in taller trees resulted in similar minimum daily leaf water potentials (Ψ L) in shorter and taller trees over a broad range of VPDs. The long-term stomatal limitation on photosynthesis, as inferred from leaf δ (13)C composition, was also greater in taller trees. The δ (13)C of wood indicated that the bulk of photosynthesis used to fuel wood production in the main trunk and branches occurred in the upper crown. L/S increased with tree height, especially after accounting for size-independent variation in crown structure across 27 trees up to 99.8 m tall. Despite greater stomatal limitation of leaf photosynthesis in taller trees, total L explained 95% of the variation in annual aboveground biomass growth among 15 trees measured for annual biomass growth increment in 2006. Our results support a theoretical model proposing that, in the face of increasing hydraulic constraints with height, whole-tree growth is maximized by a resource trade-off that increases L to maximize light capture rather than by reducing L/S to sustain g s.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Oecologiaarrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Oecologia
    Article . 2014 . Peer-reviewed
    License: Springer TDM
    Data sources: Crossref
    Oecologia
    Article . 2015
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Oecologiaarrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      Oecologia
      Article . 2014 . Peer-reviewed
      License: Springer TDM
      Data sources: Crossref
      Oecologia
      Article . 2015
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Shaw, Jack; Coco, Emily; Wootton, Kate; Daems, Dries; +3 Authors

    Analyses of ancient food webs reveal important paleoecological processes and responses to a range of perturbations throughout Earth’s history, such as climate change. These responses can inform our forecasts of future biotic responses to similar perturbations. However, previous analyses of ancient food webs rarely accounted for key differences between modern and ancient community data, particularly selective loss of soft-bodied taxa during fossilization. To consider how fossilization impacts inferences of ancient community structure we (1) analyzed node-level attributes to identify correlations between ecological roles and fossilization potential and (2) applied selective information loss procedures to food web data for extant systems. We found that selective loss of soft-bodied organisms has predictable effects on the trophic structure of “artificially fossilized” food webs, because these organisms occupy unique, consistent food web positions. Fossilized food webs misleadingly appear less stable (i.e., more prone to trophic cascades), with less predation and an overrepresentation of generalist consumers. We also found that ecological differences between soft- and hard-bodied taxa—indicated by distinct positions in modern food webs—are recorded in an Early Eocene web, but not in Cambrian webs. This suggests that ecological differences between the groups have existed for ≥ 48 million years. Our results indicate that accounting for soft-bodied taxa is vital for accurate depictions of ancient food webs. However, the consistency of information loss trends across the analyzed food webs means it is possible to predict how the selective loss of soft-bodied taxa affects food web metrics, which can permit better modeling of ancient communities. Repository Contents: Supplementary Information: Containing Supplementary Text, Figures, Tables, and Data descriptions. Supplementary Data 1: Food web data (adjacency matrices and metadata; see publication; see Related Works). Supplementary Data 2: Additional references consulted for preservation group assignments. Supplementary Data 3: Data and R scripts to recreate analyses from this study. S3_AllWebTaxonomy_updated_200903.csv: Taxonomy data for all food web nodes. S3_AnalysisOfTaxonomicRanks.csv: Lowest taxonomic rank for each node. S3_MainFigures_CaimanComparison.R: Compare the three food webs contained in (Roopnarine and Hertog 2013). S3_MainFigures_ComparisonFunctions.R: Functions for calculating metrics and generating trophic species webs. S3_MainFigures_FossilizationFunctions.R: Functions for artificially fossilizing networks. S3_MainFigures_Setup_200826.R: Setup to import food webs. S3_MainFigures_Code.R: Code to apply functions. S3_pbdb_data_200504.csv: Data from the Paleobiology Database, excluding Lagerstätten (see publication). S3_PresGrAssignments_updated_200902.csv: Preservation group assignments for all nodes. Fossil faunal lists were downloaded from the PBDB on 17th January 2020. Any data processing steps are shown in R Scripts and described in publication. Paleobiology Database is licensed under a CC BY 4.0 International License. https://creativecommons.org/licenses/by/4.0/. We analyzed food webs for four modern marine systems, one modern freshwater system, two ancient marine systems, and one ancient lake system from previous publications. All webs have similar, broad higher-rank taxonomic compositions and contain at least 85 nodes (the size of the smallest ancient network considered). For comparisons with ancient diversity, we downloaded fossil occurrences from the Paleobiology Database (PBDB) on 17th January 2020. 

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    ZENODO
    Dataset . 2020
    License: CC 0
    Data sources: ZENODO
    DRYAD
    Dataset . 2020
    License: CC 0
    Data sources: Datacite
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Dataset . 2020
      License: CC 0
      Data sources: ZENODO
      DRYAD
      Dataset . 2020
      License: CC 0
      Data sources: Datacite
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    Authors: Brittany N, Zepernick; Steven W, Wilhelm; George S, Bullerjahn; Hans W, Paerl;

    AbstractBillions of years ago, the Earth's waters were dominated by cyanobacteria. These microbes amassed to such formidable numbers, they ushered in a new era—starting with the Great Oxidation Event—fuelled by oxygenic photosynthesis. Throughout the following eon, cyanobacteria ceded portions of their global aerobic power to new photoautotrophs with the rise of eukaryotes (i.e. algae and higher plants), which co‐existed with cyanobacteria in aquatic ecosystems. Yet while cyanobacteria's ecological success story is one of the most notorious within our planet's biogeochemical history, scientists to this day still seek to unlock the secrets of their triumph. Now, the Anthropocene has ushered in a new era fuelled by excessive nutrient inputs and greenhouse gas emissions, which are again reshaping the Earth's biomes. In response, we are experiencing an increase in global cyanobacterial bloom distribution, duration, and frequency, leading to unbalanced, and in many instances degraded, ecosystems. A critical component of the cyanobacterial resurgence is the freshwater‐marine continuum: which serves to transport blooms, and the toxins they produce, on the premise that “water flows downhill”. Here, we identify drivers contributing to the cyanobacterial comeback and discuss future implications in the context of environmental and human health along the aquatic continuum. This Minireview addresses the overlooked problem of the freshwater to marine continuum and the effects of nutrients and toxic cyanobacterial blooms moving along these waters. Marine and freshwater research have historically been conducted in isolation and independently of one another. Yet, this approach fails to account for the interchangeable transit of nutrients and biology through and between these freshwater and marine systems, a phenomenon that is becoming a major problem around the globe. This Minireview highlights what we know and the challenges that lie ahead.

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    Environmental Microbiology Reports
    Article . 2022 . Peer-reviewed
    License: CC BY
    Data sources: Crossref
    UNC Dataverse
    Article . 2023
    Data sources: Datacite
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Environmental Microb...arrow_drop_down
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      Environmental Microbiology Reports
      Article . 2022 . Peer-reviewed
      License: CC BY
      Data sources: Crossref
      UNC Dataverse
      Article . 2023
      Data sources: Datacite
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Christine C. Rega-Brodsky; Charles H. Nilon; Paige S. Warren;

    Urban vacant lots are often a contentious feature in cities, seen as overgrown, messy eyesores that plague neighborhoods. We propose a shift in this perception to locations of urban potential, because vacant lots may serve as informal greenspaces that maximize urban biodiversity while satisfying residents’ preferences for their design and use. Our goal was to assess what kind of vacant lots are ecologically valuable by assessing their biotic contents and residents’ preferences within a variety of settings. We surveyed 150 vacant lots throughout Baltimore, Maryland for their plant and bird communities, classified the lot’s setting within the urban matrix, and surveyed residents. Remnant vacant lots had greater vegetative structure and bird species richness as compared to other lot origins, while vacant lot settings had limited effects on their contents. Residents preferred well-maintained lots with more trees and less artificial cover, support of which may increase local biodiversity in vacant lots. Collectively, we propose that vacant lots with a mixture of remnant and planted vegetation can act as sustainable urban greenspaces with the potential for some locations to enhance urban tree cover and bird habitat, while balancing the needs and preferences of city residents.

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    Sustainability
    Article . 2018 . Peer-reviewed
    License: CC BY
    Data sources: Crossref
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Sustainability
    Article
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    Data sources: UnpayWall
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Sustainability
    Article . 2018
    Data sources: DOAJ
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      Sustainability
      Article . 2018 . Peer-reviewed
      License: CC BY
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      Sustainability
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      Sustainability
      Article . 2018
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    Authors: Kevin R. Gurney; Jianhua Huang;

    Abstract Building energy consumption is vulnerable to climate change due to the direct relationship between outside temperature and space cooling/heating. This work quantifies how the relationship between climate change and building energy consumption varies across a range of building types at different spatiotemporal scales based on estimates in 925 U.S. locations. Large increases in building energy consumption are found in the summer (e.g., 39% increase in August for the secondary school building), especially during the daytime (e.g., >100% increase for the warehouse building, 5–6 p.m.), while decreases are found in the winter. At the spatial scale of climate-zones, annual energy consumption changes range from −17% to +21%, while at the local scale, changes range from −20% to +24%. Buildings in the warm-humid (Southeast) climate zones show larger changes than those in other regions. The variation of impact within climate zones can be larger than the variation between climate zones, suggesting a potential bias when estimating climate-zone scale changes with a small number of representative locations. The large variations found in the relationship between climate change and building energy consumption highlight the importance of assessing climate change impacts at local scales, and the need for adaptation/mitigation strategies tailored to different building types.

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    Energy
    Article
    License: Elsevier Non-Commercial
    Data sources: UnpayWall
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Energy
    Article . 2016 . Peer-reviewed
    License: Elsevier TDM
    Data sources: Crossref
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Energyarrow_drop_down
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      Energy
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      License: Elsevier Non-Commercial
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      Energy
      Article . 2016 . Peer-reviewed
      License: Elsevier TDM
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    Authors: Aimee Van Tatenhove; Emily Filiberti; T. Scott Sillett; Nicholas Rodenhouse; +1 Authors

    Climate change has been linked to distribution shifts and population declines of numerous animal and plant species, particularly in montane ecosystems. The majority of studies suggest both that low-elevation avian and small mammal species are shifting up in elevation and that high-elevation avian communities are either shifting further upslope or relocating completely with an increase in average local temperatures. However, recent research suggests numerous high elevation montane species are either not shifting or are shifting down in elevation despite the local increasing temperature trends, perhaps as a result of the increased precipitation at high elevations. In this study, we examine common vertebrate species distributions across the Hubbard Brook valley in the White Mountain National Forest, including resident and migratory songbirds and small mammals, in relation to historic spring temperature and precipitation. We found no directional change in distributions through time for any of the species. However, we show that the majority of low-elevation bird species in our study area respond to warm spring temperatures by shifting upslope. All bird species that shifted were long-distance migrants. Each low-elevation migrant species responded differently to warm spring temperatures, through upslope distribution expansion, downslope distribution contraction, or total distribution shift upslope. In contrast, we found a majority of high-elevation bird species and both high- and low-elevation mammal species did not shift in response to spring temperature or precipitation and may be subject to more complex climate trends. The heterogeneous response to climate change highlights the need for more comprehensive studies on the subject and careful consideration for appropriate species and habitat management plans in northeastern montane regions.

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    Forests
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    Authors: Zhiqiang Lu; Matthew S. Olson; Jianquan Liu; Jianquan Liu; +7 Authors

    AbstractIncreased human activity and climate change are driving numerous tree species to endangered status, and in the worst cases extinction. Here we examine the genomic signatures of the critically endangered ironwood treeOstrya rehderianaand its widespread congenerO. chinensis. Both species have similar demographic histories prior to the Last Glacial Maximum (LGM); however, the effective population size ofO. rehderianacontinued to decrease through the last 10,000 years, whereasO. chinensisrecovered to Pre-LGM numbers.O. rehderianaaccumulated more deleterious mutations, but purged more severely deleterious recessive variations than inO. chinensis. This purging and the gradually reduced inbreeding depression together may have mitigated extinction and contributed to the possible future survival of the outcrossingO. rehderiana. Our findings provide critical insights into the evolutionary history of population collapse and the potential for future recovery of the endangered trees.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Nature Communication...arrow_drop_down
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    Nature Communications
    Article . 2018 . Peer-reviewed
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    Nature Communications
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    Nature Communications
    Article . 2018
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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Andrew Nguyen; Nicholas J. Gotelli; Joel D. Parker; Kerri DeNovellis; +3 Authors

    Temperature increases associated with global climate change are likely to be accompanied by additional environmental stressors such as desiccation and food limitation, which may alter how temperature impacts organismal performance. To investigate how interactions between stressors influence thermal tolerance in the common forest ant, Aphaenogaster picea, we compared the thermal resistance of workers to heat shock with and without pre-exposure to desiccation or starvation stress. Knockdown (KD) time at 40.5 °C of desiccated ants was reduced 6% compared to controls, although longer exposure to desiccation did not further reduce thermal tolerance. Starvation, in contrast, had an increasingly severe effect on thermal tolerance: at 21 days, average KD time of starved ants was reduced by 65% compared to controls. To test whether reduction in thermal tolerance results from impairment of the heat-shock response, we measured basal gene expression and transcriptional induction of two heat-shock proteins (hsp70 and hsp40) in treated and control ants. We found no evidence that either stressor impaired the Hsp response: both desiccation and starvation slightly increased basal Hsp expression under severe stress conditions and did not affect the magnitude of induction under heat shock. These results suggest that the co-occurrence of multiple environmental stressors predicted by climate change models may make populations more vulnerable to future warming than is suggested by the results of single-factor heating experiments.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Journal of Comparati...arrow_drop_down
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    Journal of Comparative Physiology B
    Article . 2017 . Peer-reviewed
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Journal of Comparati...arrow_drop_down
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      Journal of Comparative Physiology B
      Article . 2017 . Peer-reviewed
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    Authors: Birger Ulf Hansen; Marcin Jackowicz-Korczynski; Torsten Sachs; Peter M. Lafleur; +16 Authors

    Abstract. This paper aims to assess the spatial variability in the response of CO2 exchange to irradiance across the Arctic tundra during peak season using light response curve (LRC) parameters. This investigation allows us to better understand the future response of Arctic tundra under climatic change. Peak season data were collected during different years (between 1998 and 2010) using the micrometeorological eddy covariance technique from 12 circumpolar Arctic tundra sites, in the range of 64–74° N. The LRCs were generated for 14 days with peak net ecosystem exchange (NEE) using an NEE–irradiance model. Parameters from LRCs represent site-specific traits and characteristics describing the following: (a) NEE at light saturation (Fcsat), (b) dark respiration (Rd), (c) light use efficiency (α), (d) NEE when light is at 1000 μmol m−2 s−1 (Fc1000), (e) potential photosynthesis at light saturation (Psat) and (f) the light compensation point (LCP). Parameterization of LRCs was successful in predicting CO2 flux dynamics across the Arctic tundra. We did not find any trends in LRC parameters across the whole Arctic tundra but there were indications for temperature and latitudinal differences within sub-regions like Russia and Greenland. Together, leaf area index (LAI) and July temperature had a high explanatory power of the variance in assimilation parameters (Fcsat, Fc1000 and Psat, thus illustrating the potential for upscaling CO2 exchange for the whole Arctic tundra. Dark respiration was more variable and less correlated to environmental drivers than were assimilation parameters. This indicates the inherent need to include other parameters such as nutrient availability, substrate quantity and quality in flux monitoring activities.

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    Biogeosciences (BG)
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    https://doi.org/10.5194/bgd-11...
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    Article . 2014
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    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Wageningen Staff Publications
    Article . 2014
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    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
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      https://doi.org/10.5194/bgd-11...
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      Article . 2014
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      Research Collection
      Article . 2014
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      Wageningen Staff Publications
      Article . 2014
      License: CC BY
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      Research Collection
      Article . 2014
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Selden, Rebecca L.; Morley, James W.; Latour, Robert J.; Frölicher, Thomas L.; +2 Authors

    Recent shifts in the geographic distribution of marine species have been linked to shifts in preferred thermal habitats. These shifts in distribution have already posed challenges for living marine resource management, and there is a strong need for projections of how species might be impacted by future changes in ocean temperatures during the 21st century. We modeled thermal habitat for 686 marine species in the Atlantic and Pacific oceans using long-term ecological survey data from the North American continental shelves. These habitat models were coupled to output from sixteen general circulation models that were run under high (RCP 8.5) and low (RCP 2.6) future greenhouse gas emission scenarios over the 21st century to produce 32 possible future outcomes for each species. The models generally agreed on the magnitude and direction of future shifts for some species (448 or 429 under RCP 8.5 and RCP 2.6, respectively), but strongly disagreed for other species (116 or 120 respectively). This allowed us to identify species with more or less robust predictions. Future shifts in species distributions were generally poleward and followed the coastline, but also varied among regions and species. Species from the U.S. and Canadian west coast including the Gulf of Alaska had the highest projected magnitude shifts in distribution, and many species shifted more than 1000 km under the high greenhouse gas emissions scenario. Following a strong mitigation scenario consistent with the Paris Agreement would likely produce substantially smaller shifts and less disruption to marine management efforts. Our projections offer an important tool for identifying species, fisheries, and management efforts that are particularly vulnerable to climate change impacts.

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    PLoS ONE
    Article . 2018 . Peer-reviewed
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    Article . 2018
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      https://dx.doi.org/10.7892/bor...
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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Stephen C. Sillett; Cameron B. Williams; George W. Koch; Marie E. Antoine;

    Structural and physiological changes that occur as trees grow taller are associated with increased hydraulic constraints on leaf gas exchange, yet it is unclear if leaf-level constraints influence whole-tree growth as trees approach their maximum size. We examined variation in leaf physiology, leaf area to sapwood area ratio (L/S), and annual aboveground growth across a range of tree heights in Eucalyptus regnans. Leaf photosynthetic capacity did not differ among upper crown leaves of individuals 61.1-92.4 m tall. Maximum daily and integrated diurnal stomatal conductance (g s) averaged 36 and 34% higher, respectively, in upper crown leaves of ~60-m-tall, 80-year-old trees than in ~90-m-tall, 300-year-old trees, with larger differences observed on days with a high vapor pressure deficit (VPD). Greater stomatal regulation in taller trees resulted in similar minimum daily leaf water potentials (Ψ L) in shorter and taller trees over a broad range of VPDs. The long-term stomatal limitation on photosynthesis, as inferred from leaf δ (13)C composition, was also greater in taller trees. The δ (13)C of wood indicated that the bulk of photosynthesis used to fuel wood production in the main trunk and branches occurred in the upper crown. L/S increased with tree height, especially after accounting for size-independent variation in crown structure across 27 trees up to 99.8 m tall. Despite greater stomatal limitation of leaf photosynthesis in taller trees, total L explained 95% of the variation in annual aboveground biomass growth among 15 trees measured for annual biomass growth increment in 2006. Our results support a theoretical model proposing that, in the face of increasing hydraulic constraints with height, whole-tree growth is maximized by a resource trade-off that increases L to maximize light capture rather than by reducing L/S to sustain g s.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Oecologiaarrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Oecologia
    Article . 2014 . Peer-reviewed
    License: Springer TDM
    Data sources: Crossref
    Oecologia
    Article . 2015
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Oecologiaarrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      Oecologia
      Article . 2014 . Peer-reviewed
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      Oecologia
      Article . 2015
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Shaw, Jack; Coco, Emily; Wootton, Kate; Daems, Dries; +3 Authors

    Analyses of ancient food webs reveal important paleoecological processes and responses to a range of perturbations throughout Earth’s history, such as climate change. These responses can inform our forecasts of future biotic responses to similar perturbations. However, previous analyses of ancient food webs rarely accounted for key differences between modern and ancient community data, particularly selective loss of soft-bodied taxa during fossilization. To consider how fossilization impacts inferences of ancient community structure we (1) analyzed node-level attributes to identify correlations between ecological roles and fossilization potential and (2) applied selective information loss procedures to food web data for extant systems. We found that selective loss of soft-bodied organisms has predictable effects on the trophic structure of “artificially fossilized” food webs, because these organisms occupy unique, consistent food web positions. Fossilized food webs misleadingly appear less stable (i.e., more prone to trophic cascades), with less predation and an overrepresentation of generalist consumers. We also found that ecological differences between soft- and hard-bodied taxa—indicated by distinct positions in modern food webs—are recorded in an Early Eocene web, but not in Cambrian webs. This suggests that ecological differences between the groups have existed for ≥ 48 million years. Our results indicate that accounting for soft-bodied taxa is vital for accurate depictions of ancient food webs. However, the consistency of information loss trends across the analyzed food webs means it is possible to predict how the selective loss of soft-bodied taxa affects food web metrics, which can permit better modeling of ancient communities. Repository Contents: Supplementary Information: Containing Supplementary Text, Figures, Tables, and Data descriptions. Supplementary Data 1: Food web data (adjacency matrices and metadata; see publication; see Related Works). Supplementary Data 2: Additional references consulted for preservation group assignments. Supplementary Data 3: Data and R scripts to recreate analyses from this study. S3_AllWebTaxonomy_updated_200903.csv: Taxonomy data for all food web nodes. S3_AnalysisOfTaxonomicRanks.csv: Lowest taxonomic rank for each node. S3_MainFigures_CaimanComparison.R: Compare the three food webs contained in (Roopnarine and Hertog 2013). S3_MainFigures_ComparisonFunctions.R: Functions for calculating metrics and generating trophic species webs. S3_MainFigures_FossilizationFunctions.R: Functions for artificially fossilizing networks. S3_MainFigures_Setup_200826.R: Setup to import food webs. S3_MainFigures_Code.R: Code to apply functions. S3_pbdb_data_200504.csv: Data from the Paleobiology Database, excluding Lagerstätten (see publication). S3_PresGrAssignments_updated_200902.csv: Preservation group assignments for all nodes. Fossil faunal lists were downloaded from the PBDB on 17th January 2020. Any data processing steps are shown in R Scripts and described in publication. Paleobiology Database is licensed under a CC BY 4.0 International License. https://creativecommons.org/licenses/by/4.0/. We analyzed food webs for four modern marine systems, one modern freshwater system, two ancient marine systems, and one ancient lake system from previous publications. All webs have similar, broad higher-rank taxonomic compositions and contain at least 85 nodes (the size of the smallest ancient network considered). For comparisons with ancient diversity, we downloaded fossil occurrences from the Paleobiology Database (PBDB) on 17th January 2020. 

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    ZENODO
    Dataset . 2020
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    DRYAD
    Dataset . 2020
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Dataset . 2020
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      DRYAD
      Dataset . 2020
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Brittany N, Zepernick; Steven W, Wilhelm; George S, Bullerjahn; Hans W, Paerl;

    AbstractBillions of years ago, the Earth's waters were dominated by cyanobacteria. These microbes amassed to such formidable numbers, they ushered in a new era—starting with the Great Oxidation Event—fuelled by oxygenic photosynthesis. Throughout the following eon, cyanobacteria ceded portions of their global aerobic power to new photoautotrophs with the rise of eukaryotes (i.e. algae and higher plants), which co‐existed with cyanobacteria in aquatic ecosystems. Yet while cyanobacteria's ecological success story is one of the most notorious within our planet's biogeochemical history, scientists to this day still seek to unlock the secrets of their triumph. Now, the Anthropocene has ushered in a new era fuelled by excessive nutrient inputs and greenhouse gas emissions, which are again reshaping the Earth's biomes. In response, we are experiencing an increase in global cyanobacterial bloom distribution, duration, and frequency, leading to unbalanced, and in many instances degraded, ecosystems. A critical component of the cyanobacterial resurgence is the freshwater‐marine continuum: which serves to transport blooms, and the toxins they produce, on the premise that “water flows downhill”. Here, we identify drivers contributing to the cyanobacterial comeback and discuss future implications in the context of environmental and human health along the aquatic continuum. This Minireview addresses the overlooked problem of the freshwater to marine continuum and the effects of nutrients and toxic cyanobacterial blooms moving along these waters. Marine and freshwater research have historically been conducted in isolation and independently of one another. Yet, this approach fails to account for the interchangeable transit of nutrients and biology through and between these freshwater and marine systems, a phenomenon that is becoming a major problem around the globe. This Minireview highlights what we know and the challenges that lie ahead.

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    Environmental Microbiology Reports
    Article . 2022 . Peer-reviewed
    License: CC BY
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    UNC Dataverse
    Article . 2023
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      Environmental Microbiology Reports
      Article . 2022 . Peer-reviewed
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      UNC Dataverse
      Article . 2023
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Christine C. Rega-Brodsky; Charles H. Nilon; Paige S. Warren;

    Urban vacant lots are often a contentious feature in cities, seen as overgrown, messy eyesores that plague neighborhoods. We propose a shift in this perception to locations of urban potential, because vacant lots may serve as informal greenspaces that maximize urban biodiversity while satisfying residents’ preferences for their design and use. Our goal was to assess what kind of vacant lots are ecologically valuable by assessing their biotic contents and residents’ preferences within a variety of settings. We surveyed 150 vacant lots throughout Baltimore, Maryland for their plant and bird communities, classified the lot’s setting within the urban matrix, and surveyed residents. Remnant vacant lots had greater vegetative structure and bird species richness as compared to other lot origins, while vacant lot settings had limited effects on their contents. Residents preferred well-maintained lots with more trees and less artificial cover, support of which may increase local biodiversity in vacant lots. Collectively, we propose that vacant lots with a mixture of remnant and planted vegetation can act as sustainable urban greenspaces with the potential for some locations to enhance urban tree cover and bird habitat, while balancing the needs and preferences of city residents.

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    Sustainability
    Article . 2018 . Peer-reviewed
    License: CC BY
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    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Sustainability
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    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Sustainability
    Article . 2018
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      Sustainability
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    Authors: Kevin R. Gurney; Jianhua Huang;

    Abstract Building energy consumption is vulnerable to climate change due to the direct relationship between outside temperature and space cooling/heating. This work quantifies how the relationship between climate change and building energy consumption varies across a range of building types at different spatiotemporal scales based on estimates in 925 U.S. locations. Large increases in building energy consumption are found in the summer (e.g., 39% increase in August for the secondary school building), especially during the daytime (e.g., >100% increase for the warehouse building, 5–6 p.m.), while decreases are found in the winter. At the spatial scale of climate-zones, annual energy consumption changes range from −17% to +21%, while at the local scale, changes range from −20% to +24%. Buildings in the warm-humid (Southeast) climate zones show larger changes than those in other regions. The variation of impact within climate zones can be larger than the variation between climate zones, suggesting a potential bias when estimating climate-zone scale changes with a small number of representative locations. The large variations found in the relationship between climate change and building energy consumption highlight the importance of assessing climate change impacts at local scales, and the need for adaptation/mitigation strategies tailored to different building types.

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    Energy
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    Energy
    Article . 2016 . Peer-reviewed
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      Energy
      Article . 2016 . Peer-reviewed
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    Authors: Aimee Van Tatenhove; Emily Filiberti; T. Scott Sillett; Nicholas Rodenhouse; +1 Authors

    Climate change has been linked to distribution shifts and population declines of numerous animal and plant species, particularly in montane ecosystems. The majority of studies suggest both that low-elevation avian and small mammal species are shifting up in elevation and that high-elevation avian communities are either shifting further upslope or relocating completely with an increase in average local temperatures. However, recent research suggests numerous high elevation montane species are either not shifting or are shifting down in elevation despite the local increasing temperature trends, perhaps as a result of the increased precipitation at high elevations. In this study, we examine common vertebrate species distributions across the Hubbard Brook valley in the White Mountain National Forest, including resident and migratory songbirds and small mammals, in relation to historic spring temperature and precipitation. We found no directional change in distributions through time for any of the species. However, we show that the majority of low-elevation bird species in our study area respond to warm spring temperatures by shifting upslope. All bird species that shifted were long-distance migrants. Each low-elevation migrant species responded differently to warm spring temperatures, through upslope distribution expansion, downslope distribution contraction, or total distribution shift upslope. In contrast, we found a majority of high-elevation bird species and both high- and low-elevation mammal species did not shift in response to spring temperature or precipitation and may be subject to more complex climate trends. The heterogeneous response to climate change highlights the need for more comprehensive studies on the subject and careful consideration for appropriate species and habitat management plans in northeastern montane regions.

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    Forests
    Article . 2019 . Peer-reviewed
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    Forests
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    Forests
    Article . 2019
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      Article . 2019
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    Authors: Zhiqiang Lu; Matthew S. Olson; Jianquan Liu; Jianquan Liu; +7 Authors

    AbstractIncreased human activity and climate change are driving numerous tree species to endangered status, and in the worst cases extinction. Here we examine the genomic signatures of the critically endangered ironwood treeOstrya rehderianaand its widespread congenerO. chinensis. Both species have similar demographic histories prior to the Last Glacial Maximum (LGM); however, the effective population size ofO. rehderianacontinued to decrease through the last 10,000 years, whereasO. chinensisrecovered to Pre-LGM numbers.O. rehderianaaccumulated more deleterious mutations, but purged more severely deleterious recessive variations than inO. chinensis. This purging and the gradually reduced inbreeding depression together may have mitigated extinction and contributed to the possible future survival of the outcrossingO. rehderiana. Our findings provide critical insights into the evolutionary history of population collapse and the potential for future recovery of the endangered trees.

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    Nature Communications
    Article . 2018 . Peer-reviewed
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    Nature Communications
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    Nature Communications
    Article . 2018
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    Authors: Andrew Nguyen; Nicholas J. Gotelli; Joel D. Parker; Kerri DeNovellis; +3 Authors

    Temperature increases associated with global climate change are likely to be accompanied by additional environmental stressors such as desiccation and food limitation, which may alter how temperature impacts organismal performance. To investigate how interactions between stressors influence thermal tolerance in the common forest ant, Aphaenogaster picea, we compared the thermal resistance of workers to heat shock with and without pre-exposure to desiccation or starvation stress. Knockdown (KD) time at 40.5 °C of desiccated ants was reduced 6% compared to controls, although longer exposure to desiccation did not further reduce thermal tolerance. Starvation, in contrast, had an increasingly severe effect on thermal tolerance: at 21 days, average KD time of starved ants was reduced by 65% compared to controls. To test whether reduction in thermal tolerance results from impairment of the heat-shock response, we measured basal gene expression and transcriptional induction of two heat-shock proteins (hsp70 and hsp40) in treated and control ants. We found no evidence that either stressor impaired the Hsp response: both desiccation and starvation slightly increased basal Hsp expression under severe stress conditions and did not affect the magnitude of induction under heat shock. These results suggest that the co-occurrence of multiple environmental stressors predicted by climate change models may make populations more vulnerable to future warming than is suggested by the results of single-factor heating experiments.

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    Journal of Comparative Physiology B
    Article . 2017 . Peer-reviewed
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      Journal of Comparative Physiology B
      Article . 2017 . Peer-reviewed
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    Authors: Birger Ulf Hansen; Marcin Jackowicz-Korczynski; Torsten Sachs; Peter M. Lafleur; +16 Authors

    Abstract. This paper aims to assess the spatial variability in the response of CO2 exchange to irradiance across the Arctic tundra during peak season using light response curve (LRC) parameters. This investigation allows us to better understand the future response of Arctic tundra under climatic change. Peak season data were collected during different years (between 1998 and 2010) using the micrometeorological eddy covariance technique from 12 circumpolar Arctic tundra sites, in the range of 64–74° N. The LRCs were generated for 14 days with peak net ecosystem exchange (NEE) using an NEE–irradiance model. Parameters from LRCs represent site-specific traits and characteristics describing the following: (a) NEE at light saturation (Fcsat), (b) dark respiration (Rd), (c) light use efficiency (α), (d) NEE when light is at 1000 μmol m−2 s−1 (Fc1000), (e) potential photosynthesis at light saturation (Psat) and (f) the light compensation point (LCP). Parameterization of LRCs was successful in predicting CO2 flux dynamics across the Arctic tundra. We did not find any trends in LRC parameters across the whole Arctic tundra but there were indications for temperature and latitudinal differences within sub-regions like Russia and Greenland. Together, leaf area index (LAI) and July temperature had a high explanatory power of the variance in assimilation parameters (Fcsat, Fc1000 and Psat, thus illustrating the potential for upscaling CO2 exchange for the whole Arctic tundra. Dark respiration was more variable and less correlated to environmental drivers than were assimilation parameters. This indicates the inherent need to include other parameters such as nutrient availability, substrate quantity and quality in flux monitoring activities.

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    Biogeosciences (BG)
    Article . 2014 . Peer-reviewed
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    Authors: Selden, Rebecca L.; Morley, James W.; Latour, Robert J.; Frölicher, Thomas L.; +2 Authors

    Recent shifts in the geographic distribution of marine species have been linked to shifts in preferred thermal habitats. These shifts in distribution have already posed challenges for living marine resource management, and there is a strong need for projections of how species might be impacted by future changes in ocean temperatures during the 21st century. We modeled thermal habitat for 686 marine species in the Atlantic and Pacific oceans using long-term ecological survey data from the North American continental shelves. These habitat models were coupled to output from sixteen general circulation models that were run under high (RCP 8.5) and low (RCP 2.6) future greenhouse gas emission scenarios over the 21st century to produce 32 possible future outcomes for each species. The models generally agreed on the magnitude and direction of future shifts for some species (448 or 429 under RCP 8.5 and RCP 2.6, respectively), but strongly disagreed for other species (116 or 120 respectively). This allowed us to identify species with more or less robust predictions. Future shifts in species distributions were generally poleward and followed the coastline, but also varied among regions and species. Species from the U.S. and Canadian west coast including the Gulf of Alaska had the highest projected magnitude shifts in distribution, and many species shifted more than 1000 km under the high greenhouse gas emissions scenario. Following a strong mitigation scenario consistent with the Paris Agreement would likely produce substantially smaller shifts and less disruption to marine management efforts. Our projections offer an important tool for identifying species, fisheries, and management efforts that are particularly vulnerable to climate change impacts.

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