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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Horton, Tammy; Serpell-Stevens, Amanda; Domedel, Georgina Valls; Bett, Brian James;

    These data record the results of processing otter trawl catches (OTSB14; Merrett & Marshall, 1980) from the National Oceanography Centre (NOC, UK) long-term study of the Porcupine Abyssal Plain (PAP), including the PAP-Sustained Observatory time-series. The data concern catches recovered during the RRS Challenger cruise 135 in 1997. Billett, D.S.M. et al. (1998). RRS Challenger Cruise 135, 15 Oct-30 Oct 1997. BENGAL: High resolution temporal and spatial study of the BENthic biology and Geochemistry of a north-eastern Atlantic abyssal Locality. Southampton Oceanography Centre Cruise Report, No. 19, 49pp.| https://www.bodc.ac.uk/resources/inventories/cruise_inventory/reports/ch135_97.pdf

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    Global Biodiversity Information Facility
    Dataset . 2024
    License: CC BY
    Data sources: Datacite
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Global Biodiversity ...arrow_drop_down
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      Global Biodiversity Information Facility
      Dataset . 2024
      License: CC BY
      Data sources: Datacite
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: John W. Williams, Karyn Tabor;

    This dataset contains two metrics for climate change exposure using downscaled climate projections with the SRES A2 emissions scenario (Tabor and Williams, 2007).The metrics represent dissimilarity measurements of the squared Euclidean distance between seasonal (June–August and December–February) temperature and precipitation variables in the 20th century climate and mid-21st century climate. (1) disappearing climate risk - measure of dissimilarity between a pixel’s late 20th century climate and its closest matching pixel in the global set of 21st-century climates (2) novel climate risk - measure of dissimilarity between a pixel’s future climate and its closest matching pixel in the global set of late 20th-century climates. The data are in arcASCII format. All data are in units of standard Euclidean distance and multiplied by 1000. This is the original data. To scale the data similar to Tabor et al. (2018), remove outliers above the 99th percentile distribution before rescaling from 0-1. Unprojected number of columns 2160 number of rows 857 Lower Left X Center -179.917 Lower Left Y Center -59.084 Cell size 0.166667 decimal degrees (10 minutes or ~17 km) {"references": ["Tabor, K. et al. (2018). Tropical Protected Areas Under Increasing Threats from Climate Change and Deforestation: https://doi.org/10.3390/land7030090", "Tabor and Williams (2010). Globally downscaled climate projections for assessing the conservation impacts of climate change. https://doi.org/10.1890/09-0173.1", "Williams, J.W. et al. (2007). Projected distributions of novel and disappearing climates by 20100 AD. https://doi.org/10.1073/pnas.0606292104"]} Support for this project was provided by Conservation International, the Land Tenure Center at the University of Wisconsin, the Center for Climatic Research at the University of Wisconsin, and the Environment Program at the University of Wisconsin–Madison. This research has been funded in part by the Walton Family Foundation, the Gordon and Betty Moore Foundation, and a gift from Betty and Gordon Moore.

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    ZENODO
    Dataset . 2018
    License: CC BY
    Data sources: Datacite
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    ZENODO
    Dataset . 2018
    License: CC BY
    Data sources: Datacite
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    ZENODO
    Dataset . 2018
    License: CC BY
    Data sources: ZENODO
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      ZENODO
      Dataset . 2018
      License: CC BY
      Data sources: Datacite
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      ZENODO
      Dataset . 2018
      License: CC BY
      Data sources: Datacite
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      ZENODO
      Dataset . 2018
      License: CC BY
      Data sources: ZENODO
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    Authors: Gebruk, Anna; Dgebuadze, Polina; Rogozhin, Vladimir; Ermilova, Yulia; +2 Authors

    The dataset comprises full list of species of macrozoobenthos collected from the Pechora Sea (SE Barents Sea). Grab samples were collected from 10 stations in the Pechora Bay from aboard RV Kartesh in 2020-2021. Macrobenthic invertebrates were identified with the maximum level of certainty through optical microscopy using regional taxonomic keys. All taxonomic names were standardised using the World Register of Marine Species (WoRMS). All specimens have been counted and weighted (wet biomass) on Ohaus Adventurer scales with reported accuracy to 0.01 g. Bivalve molluscs and gastropods were weighed in shells. Biomass (g. m-2) and abundance (ind m-2) are used to characterise macrozoobenthos. The sampling and identification work was carried out in collaboration with specialists from Lomonosov Moscow State University Marine Research Center and P.P. Shirshov Institute of Oceanology.

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  • Authors: Evans, T.M.; Heard, M.S.; Vanbergen, A.J.; Cavers, S.; +1 Authors

    This dataset contains measures of fitness traits from Eschscholzia californica progeny which were experimentally supplemented with selfed or outcrossed pollen to determine the effects of self-fertilisation on a plant which has a low propensity to self. A glasshouse experiment was conducted using 40 plants. On each plant two flowers were emasculated and the first supplemented with outcrossed pollen and the second with self-pollen. From each supplemented plant, a seed was sowed from the outcrossed fruit and from the selfed fruit. The following fitness traits were recorded; the germination rate, the duration from germination to reproductive maturity (time of first flower), together with the height (cm) and biomass (number of flowers and buds) at reproductive maturity. The dataset was part of a larger experiment looking at the effect of floral resources on the pollination services to isolated plants. We performed a glasshouse experiment using 40 artificially crossed plants. On each plant, we emasculated two flowers and supplemented the first with outcrossed pollen and the second with self-pollen. This involved methodically wiping two dehiscing anthers from a donor plant or the focal plant onto the receptive stigma with dissecting tweezers, before covering it in fine muslin. From each supplemented plant, we sowed a seed from the outcrossed fruit and from the selfed fruit (given that selfed fruits predominantly only produced one seed) into 1L pots. These were then stored under glasshouse conditions before the fitness traits were measured.

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Horton, Tammy; Serpell-Stevens, Amanda; Domedel, Georgina Valls; Bett, Brian James;

    These data record the results of processing otter trawl catches (OTSB14; Merrett & Marshall, 1980) from the National Oceanography Centre (NOC, UK) long-term study of the Porcupine Abyssal Plain (PAP), including the PAP-Sustained Observatory time-series. The data concern catches recovered during the RRS Discovery III Cruise 231 in 1998. Rice, A.L. et al. (1998). RRS Discovery Cruise 231, 28 Feb-30 Mar 1998. BENGAL: High resolution temporal and spatial study of the BENthic biology and Geochemistry of a north-eastern Atlantic abyssal Locality. Southampton Oceanography Centre Cruise Report, No. 18, 84pp.|https://www.bodc.ac.uk/resources/inventories/cruise_inventory/reports/d231.pdf

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    Global Biodiversity Information Facility
    Dataset . 2024
    License: CC BY
    Data sources: Datacite
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      Global Biodiversity Information Facility
      Dataset . 2024
      License: CC BY
      Data sources: Datacite
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Horton, Tammy; Serpell-Stevens, Amanda; Domedel, Georgina Valls; Bett, Brian James;

    These data record the results of processing otter trawl catches (OTSB14; Merrett & Marshall, 1980) from the National Oceanography Centre (NOC, UK) long-term study of the Porcupine Abyssal Plain (PAP), including the PAP-Sustained Observatory time-series. The data concern catches recovered during the RRS Discovery III cruise 222B in 1996. Rice, A.L. et al. (1996). RRS Discovery Cruise 222, Leg 2, 29 Aug 24 Sep 1996. BENGAL: High resolution temporal and spatial study of the Benthic Biology and Geochemistry of a northeastern Atlantic abyssal Locality. Southampton Oceanography Centre, Cruise Report No. 4, 86 pp.| https://www.bodc.ac.uk/resources/inventories/cruise_inventory/reports/d222b.pdf

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    Global Biodiversity Information Facility
    Dataset . 2024
    License: CC BY
    Data sources: Datacite
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      Global Biodiversity Information Facility
      Dataset . 2024
      License: CC BY
      Data sources: Datacite
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  • Authors: Drewer, J.; White, S.; Sionita, R.; Pujianto, P.;

    This dataset contains terrestrial fluxes of nitrous oxide (N2O), methane (CH4) and ecosystem respiration (carbon dioxide (CO2)) calculated from static chamber measurements in riparian buffers of oil palm plantations on mineral soil, in Riau, Sumatra, Indonesia. Measurements were made monthly, from January 2019 until September 2021, with a break from April 2019 to October 2019 to allow for felling and replanting, and another break from January 2021 to June 2021 due to Covid-19 restrictions. To help to reduce the environmental impact of oil palm plantations, riparian buffers are now required by regulations in many Southeast Asian countries. The experiments were conducted to investigate the impact of greenhouse gas emissions from the riparian buffers. Research was funded through NERC grant NE/R000131/1 Sustainable Use of Natural Resources to Improve Human Health and Support Economic Development (SUNRISE) Greenhouse gas concentrations were measured using static chambers, enclosed for 45 minutes. Multiple regressions (including linear and hierarchical multiple regression) were fitted to calculate the best fit flux, using the RCflux R package, written by Dr Peter Levy (UKCEH).

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  • Authors: Liang, M.; Johnson, D.; Burslem, D.F.R.P.; Yu, S.; +5 Authors

    This dataset reports results on seedling growth and survival for two hyphal exclusion experiments in a subtropical forest. The data include survival status, height, total biomass and the biomass of component plant parts, percentage root colonisation by mycorrhizas, for tree seedlings of ten common species including five ectomycorrhizal (ECM) and five arbuscular mycorrhizal (AM) species, which were transplanted in the in-growth cores with windows covering different sizes of nylon meshes (35 vs. 0.5 µm). The dataset provides raw data on growth and survival metrics for each seedling, plus identifying codes for the dominant sites where the experiments were conducted, as well as experimental block, mesh treatment, botanical names for the tree species, and mycorrhizal type. The data were entered into Excel spreadsheets and exported as comma separated value files (csv). Study area - the Heishiding Nature Reserve (111°53’E, 23°27’N, 150-927 m a.s.l.) in Guangdong Province of south China. Mesh-walled cores were assembled from 16 cm diameter × 30 cm deep PVC piping, perforated with six 8-cm-diameter windows which were regularly distributed along the side with three of them at the depth of 4-12 cm and the other three at 16-24 cm. The cores were lined with 35 µm or 0.5 µm nylon mesh (Plastok Associates Ltd, Birkenhead, UK) to cover the bottom and the windows, which was attached using transparent superglue (Pattex(R), Henkel Adhesives Ltd., Shantou, China). Nylon mesh with a pore size of 35 µm excludes roots of neighboring plants, but allows mycorrhizal hyphae access to the transplanted seedlings; while cores with a 0.5 µm mesh exclude both fine roots and hyphae, with only free-living soil microorganisms passing through. We then covered the sides and the bottoms of all cores with 2 mm nylon mesh, to prevent soil fauna damaging the smaller size meshes.

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    Authors: Perna, Carolina; Campana, Stefano; Sarri, Daniele; Vieri, Marco; +2 Authors

    These data were collected as part of a case study for the ipaast project. The aim of the survey was to produce datasets interoperable for applications in archaeology and precision agriculture. The OptRx® Crop Sensors (AgLeader Technology, Ames, IO, USA) measure the reflectance in the 630–685 nm (red), 695–750 nm (RE red edge) and 760–850 nm (NIR—Near InfraRed) wavebands. Using those wavebands, NDVI and NDRE indexes are calculated. NDVI and NDRE are vegetative indexes obtained from the red, red-edge and NIR wavebands with formulas 1 and 2: NDVI = NIR−REDNIR+RED ; NDRE= NIR−RENIR+RE The two index values range from -1 (bare ground or water) to 1 (highly vigorous vegetation). To collect data, the sensor was mounted on a ground vehicle, a Kubota B2420 tractor. The sensor was paired with a GNNS receiver, GPS 6500 from AgLeader Technology (Ames, IO, USA). The instrumentation was coupled with the hardware and the rough book (Panasonic ToughPad FG-Z1, Panasonic Core. It was possible to install the sensor facing the ground using a metal bracket positioned on the front of the tractor. The sensor was positioned 1.15 m from the ground, emitting a rectangular footprint of 1.14 m in length and 20cm in width. The data were collected every 30 cm in alternate rows. 12 rows in total were analysed, covering a surface of 1.07 ha. Data were processed on QGIS. First, the data was interpolated with the Inverse Distance Weighting (IDW) function. The function was set up with a distance coefficient P of 4, with 40 rows and 98 columns. A Gaussian filter with a standard deviation value of 2 and a range of research of 3 was subsequently applied to create a representative raster.

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    ZENODO
    Dataset . 2023
    License: CC BY
    Data sources: Datacite
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    ZENODO
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    ZENODO
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      ZENODO
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      ZENODO
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  • Authors: Miller, L.C.; Smeaton, C.; Garbutt, A.; Austin, W.E.N.;

    The dataset comprises of physical and biogeochemical measurements of belowground (root) biomass from across four Scottish saltmarshes. Sites were chosen to represent contrasting habitats types in Scotland, in particular sediment types, vegetation and sea level history. The data provide a quantitative measure of belowground (root) biomass, organic carbon content and belowground (root) carbon. Samples were collected using a wide gauge gouge corer. The samples were processed to determine belowground (root) biomass, the organic carbon was quantified through elemental analysis and these two data sets were combined to calculate the belowground (root) carbon content. The data were collected to help create a detailed picture of saltmarsh carbon storage in surficial soils across Scotland. The work was carried out under the NERC programme - Carbon Storage in Intertidal Environment (C-SIDE), NERC grant reference NE/R010846/1 Soil cores were taken at each sampling location using a wide diameter gouge corer. The location of the sample was recorded using GPS. Prior to analysis the samples were stored at 4 degrees Celsius at the University of St Andrews. Belowground (root) biomass, organic carbon content and belowground (root) carbon data was produced using standard analytical procedures (detailed in the supporting documentation). All laboratory equipment were calibrated in accordance with the laboratory practises at the University of St Andrews. Results were recorded on to lab sheets and transferred into an Excel file. Results were exported as comma separated value (.csv) files for ingestion into the EIDC.

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    Authors: Horton, Tammy; Serpell-Stevens, Amanda; Domedel, Georgina Valls; Bett, Brian James;

    These data record the results of processing otter trawl catches (OTSB14; Merrett & Marshall, 1980) from the National Oceanography Centre (NOC, UK) long-term study of the Porcupine Abyssal Plain (PAP), including the PAP-Sustained Observatory time-series. The data concern catches recovered during the RRS Challenger cruise 135 in 1997. Billett, D.S.M. et al. (1998). RRS Challenger Cruise 135, 15 Oct-30 Oct 1997. BENGAL: High resolution temporal and spatial study of the BENthic biology and Geochemistry of a north-eastern Atlantic abyssal Locality. Southampton Oceanography Centre Cruise Report, No. 19, 49pp.| https://www.bodc.ac.uk/resources/inventories/cruise_inventory/reports/ch135_97.pdf

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    Global Biodiversity Information Facility
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      Global Biodiversity Information Facility
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: John W. Williams, Karyn Tabor;

    This dataset contains two metrics for climate change exposure using downscaled climate projections with the SRES A2 emissions scenario (Tabor and Williams, 2007).The metrics represent dissimilarity measurements of the squared Euclidean distance between seasonal (June–August and December–February) temperature and precipitation variables in the 20th century climate and mid-21st century climate. (1) disappearing climate risk - measure of dissimilarity between a pixel’s late 20th century climate and its closest matching pixel in the global set of 21st-century climates (2) novel climate risk - measure of dissimilarity between a pixel’s future climate and its closest matching pixel in the global set of late 20th-century climates. The data are in arcASCII format. All data are in units of standard Euclidean distance and multiplied by 1000. This is the original data. To scale the data similar to Tabor et al. (2018), remove outliers above the 99th percentile distribution before rescaling from 0-1. Unprojected number of columns 2160 number of rows 857 Lower Left X Center -179.917 Lower Left Y Center -59.084 Cell size 0.166667 decimal degrees (10 minutes or ~17 km) {"references": ["Tabor, K. et al. (2018). Tropical Protected Areas Under Increasing Threats from Climate Change and Deforestation: https://doi.org/10.3390/land7030090", "Tabor and Williams (2010). Globally downscaled climate projections for assessing the conservation impacts of climate change. https://doi.org/10.1890/09-0173.1", "Williams, J.W. et al. (2007). Projected distributions of novel and disappearing climates by 20100 AD. https://doi.org/10.1073/pnas.0606292104"]} Support for this project was provided by Conservation International, the Land Tenure Center at the University of Wisconsin, the Center for Climatic Research at the University of Wisconsin, and the Environment Program at the University of Wisconsin–Madison. This research has been funded in part by the Walton Family Foundation, the Gordon and Betty Moore Foundation, and a gift from Betty and Gordon Moore.

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    ZENODO
    Dataset . 2018
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    ZENODO
    Dataset . 2018
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    ZENODO
    Dataset . 2018
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      ZENODO
      Dataset . 2018
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      ZENODO
      Dataset . 2018
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      ZENODO
      Dataset . 2018
      License: CC BY
      Data sources: ZENODO
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Gebruk, Anna; Dgebuadze, Polina; Rogozhin, Vladimir; Ermilova, Yulia; +2 Authors

    The dataset comprises full list of species of macrozoobenthos collected from the Pechora Sea (SE Barents Sea). Grab samples were collected from 10 stations in the Pechora Bay from aboard RV Kartesh in 2020-2021. Macrobenthic invertebrates were identified with the maximum level of certainty through optical microscopy using regional taxonomic keys. All taxonomic names were standardised using the World Register of Marine Species (WoRMS). All specimens have been counted and weighted (wet biomass) on Ohaus Adventurer scales with reported accuracy to 0.01 g. Bivalve molluscs and gastropods were weighed in shells. Biomass (g. m-2) and abundance (ind m-2) are used to characterise macrozoobenthos. The sampling and identification work was carried out in collaboration with specialists from Lomonosov Moscow State University Marine Research Center and P.P. Shirshov Institute of Oceanology.

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  • Authors: Evans, T.M.; Heard, M.S.; Vanbergen, A.J.; Cavers, S.; +1 Authors

    This dataset contains measures of fitness traits from Eschscholzia californica progeny which were experimentally supplemented with selfed or outcrossed pollen to determine the effects of self-fertilisation on a plant which has a low propensity to self. A glasshouse experiment was conducted using 40 plants. On each plant two flowers were emasculated and the first supplemented with outcrossed pollen and the second with self-pollen. From each supplemented plant, a seed was sowed from the outcrossed fruit and from the selfed fruit. The following fitness traits were recorded; the germination rate, the duration from germination to reproductive maturity (time of first flower), together with the height (cm) and biomass (number of flowers and buds) at reproductive maturity. The dataset was part of a larger experiment looking at the effect of floral resources on the pollination services to isolated plants. We performed a glasshouse experiment using 40 artificially crossed plants. On each plant, we emasculated two flowers and supplemented the first with outcrossed pollen and the second with self-pollen. This involved methodically wiping two dehiscing anthers from a donor plant or the focal plant onto the receptive stigma with dissecting tweezers, before covering it in fine muslin. From each supplemented plant, we sowed a seed from the outcrossed fruit and from the selfed fruit (given that selfed fruits predominantly only produced one seed) into 1L pots. These were then stored under glasshouse conditions before the fitness traits were measured.

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    Authors: Horton, Tammy; Serpell-Stevens, Amanda; Domedel, Georgina Valls; Bett, Brian James;

    These data record the results of processing otter trawl catches (OTSB14; Merrett & Marshall, 1980) from the National Oceanography Centre (NOC, UK) long-term study of the Porcupine Abyssal Plain (PAP), including the PAP-Sustained Observatory time-series. The data concern catches recovered during the RRS Discovery III Cruise 231 in 1998. Rice, A.L. et al. (1998). RRS Discovery Cruise 231, 28 Feb-30 Mar 1998. BENGAL: High resolution temporal and spatial study of the BENthic biology and Geochemistry of a north-eastern Atlantic abyssal Locality. Southampton Oceanography Centre Cruise Report, No. 18, 84pp.|https://www.bodc.ac.uk/resources/inventories/cruise_inventory/reports/d231.pdf

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    Global Biodiversity Information Facility
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    Authors: Horton, Tammy; Serpell-Stevens, Amanda; Domedel, Georgina Valls; Bett, Brian James;

    These data record the results of processing otter trawl catches (OTSB14; Merrett & Marshall, 1980) from the National Oceanography Centre (NOC, UK) long-term study of the Porcupine Abyssal Plain (PAP), including the PAP-Sustained Observatory time-series. The data concern catches recovered during the RRS Discovery III cruise 222B in 1996. Rice, A.L. et al. (1996). RRS Discovery Cruise 222, Leg 2, 29 Aug 24 Sep 1996. BENGAL: High resolution temporal and spatial study of the Benthic Biology and Geochemistry of a northeastern Atlantic abyssal Locality. Southampton Oceanography Centre, Cruise Report No. 4, 86 pp.| https://www.bodc.ac.uk/resources/inventories/cruise_inventory/reports/d222b.pdf

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    Global Biodiversity Information Facility
    Dataset . 2024
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  • Authors: Drewer, J.; White, S.; Sionita, R.; Pujianto, P.;

    This dataset contains terrestrial fluxes of nitrous oxide (N2O), methane (CH4) and ecosystem respiration (carbon dioxide (CO2)) calculated from static chamber measurements in riparian buffers of oil palm plantations on mineral soil, in Riau, Sumatra, Indonesia. Measurements were made monthly, from January 2019 until September 2021, with a break from April 2019 to October 2019 to allow for felling and replanting, and another break from January 2021 to June 2021 due to Covid-19 restrictions. To help to reduce the environmental impact of oil palm plantations, riparian buffers are now required by regulations in many Southeast Asian countries. The experiments were conducted to investigate the impact of greenhouse gas emissions from the riparian buffers. Research was funded through NERC grant NE/R000131/1 Sustainable Use of Natural Resources to Improve Human Health and Support Economic Development (SUNRISE) Greenhouse gas concentrations were measured using static chambers, enclosed for 45 minutes. Multiple regressions (including linear and hierarchical multiple regression) were fitted to calculate the best fit flux, using the RCflux R package, written by Dr Peter Levy (UKCEH).

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  • Authors: Liang, M.; Johnson, D.; Burslem, D.F.R.P.; Yu, S.; +5 Authors

    This dataset reports results on seedling growth and survival for two hyphal exclusion experiments in a subtropical forest. The data include survival status, height, total biomass and the biomass of component plant parts, percentage root colonisation by mycorrhizas, for tree seedlings of ten common species including five ectomycorrhizal (ECM) and five arbuscular mycorrhizal (AM) species, which were transplanted in the in-growth cores with windows covering different sizes of nylon meshes (35 vs. 0.5 µm). The dataset provides raw data on growth and survival metrics for each seedling, plus identifying codes for the dominant sites where the experiments were conducted, as well as experimental block, mesh treatment, botanical names for the tree species, and mycorrhizal type. The data were entered into Excel spreadsheets and exported as comma separated value files (csv). Study area - the Heishiding Nature Reserve (111°53’E, 23°27’N, 150-927 m a.s.l.) in Guangdong Province of south China. Mesh-walled cores were assembled from 16 cm diameter × 30 cm deep PVC piping, perforated with six 8-cm-diameter windows which were regularly distributed along the side with three of them at the depth of 4-12 cm and the other three at 16-24 cm. The cores were lined with 35 µm or 0.5 µm nylon mesh (Plastok Associates Ltd, Birkenhead, UK) to cover the bottom and the windows, which was attached using transparent superglue (Pattex(R), Henkel Adhesives Ltd., Shantou, China). Nylon mesh with a pore size of 35 µm excludes roots of neighboring plants, but allows mycorrhizal hyphae access to the transplanted seedlings; while cores with a 0.5 µm mesh exclude both fine roots and hyphae, with only free-living soil microorganisms passing through. We then covered the sides and the bottoms of all cores with 2 mm nylon mesh, to prevent soil fauna damaging the smaller size meshes.

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    Authors: Perna, Carolina; Campana, Stefano; Sarri, Daniele; Vieri, Marco; +2 Authors

    These data were collected as part of a case study for the ipaast project. The aim of the survey was to produce datasets interoperable for applications in archaeology and precision agriculture. The OptRx® Crop Sensors (AgLeader Technology, Ames, IO, USA) measure the reflectance in the 630–685 nm (red), 695–750 nm (RE red edge) and 760–850 nm (NIR—Near InfraRed) wavebands. Using those wavebands, NDVI and NDRE indexes are calculated. NDVI and NDRE are vegetative indexes obtained from the red, red-edge and NIR wavebands with formulas 1 and 2: NDVI = NIR−REDNIR+RED ; NDRE= NIR−RENIR+RE The two index values range from -1 (bare ground or water) to 1 (highly vigorous vegetation). To collect data, the sensor was mounted on a ground vehicle, a Kubota B2420 tractor. The sensor was paired with a GNNS receiver, GPS 6500 from AgLeader Technology (Ames, IO, USA). The instrumentation was coupled with the hardware and the rough book (Panasonic ToughPad FG-Z1, Panasonic Core. It was possible to install the sensor facing the ground using a metal bracket positioned on the front of the tractor. The sensor was positioned 1.15 m from the ground, emitting a rectangular footprint of 1.14 m in length and 20cm in width. The data were collected every 30 cm in alternate rows. 12 rows in total were analysed, covering a surface of 1.07 ha. Data were processed on QGIS. First, the data was interpolated with the Inverse Distance Weighting (IDW) function. The function was set up with a distance coefficient P of 4, with 40 rows and 98 columns. A Gaussian filter with a standard deviation value of 2 and a range of research of 3 was subsequently applied to create a representative raster.

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  • Authors: Miller, L.C.; Smeaton, C.; Garbutt, A.; Austin, W.E.N.;

    The dataset comprises of physical and biogeochemical measurements of belowground (root) biomass from across four Scottish saltmarshes. Sites were chosen to represent contrasting habitats types in Scotland, in particular sediment types, vegetation and sea level history. The data provide a quantitative measure of belowground (root) biomass, organic carbon content and belowground (root) carbon. Samples were collected using a wide gauge gouge corer. The samples were processed to determine belowground (root) biomass, the organic carbon was quantified through elemental analysis and these two data sets were combined to calculate the belowground (root) carbon content. The data were collected to help create a detailed picture of saltmarsh carbon storage in surficial soils across Scotland. The work was carried out under the NERC programme - Carbon Storage in Intertidal Environment (C-SIDE), NERC grant reference NE/R010846/1 Soil cores were taken at each sampling location using a wide diameter gouge corer. The location of the sample was recorded using GPS. Prior to analysis the samples were stored at 4 degrees Celsius at the University of St Andrews. Belowground (root) biomass, organic carbon content and belowground (root) carbon data was produced using standard analytical procedures (detailed in the supporting documentation). All laboratory equipment were calibrated in accordance with the laboratory practises at the University of St Andrews. Results were recorded on to lab sheets and transferred into an Excel file. Results were exported as comma separated value (.csv) files for ingestion into the EIDC.

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