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This product used a machine learning approach (feed-forward neural network - FFNN) to reconstruct a high-resolution (0.25° × 0.25°) ocean subsurface (1–2000 m) salinity dataset for the period 1993–2018 by merging in situ salinity profile observations with high-resolution (0.25° × 0.25°) satellite remote sensing altimetry absolute dynamic topography (ADT), sea surface temperature (SST), sea surface wind (SSW) field data, and a coarse resolution (1° × 1°) gridded salinity product. The new 0.25° × 0.25° reconstruction shows more realistic spatial signals in the regions with strong mesoscale variations, e.g., the Gulf Stream, Kuroshio, and Antarctic Circumpolar Current regions, than the 1° × 1° resolution product, indicating the efficiency of the machine learning approach in bringing satellite observations together with in situ observations. The large-scale salinity patterns from 0.25° × 0.25° data are consistent with the 1° × 1°gridded salinity field, suggesting the persistence of the large-scale signals in the high-resolution reconstruction.Time Range:1993.01-2018.12Region:GlobalLongitude:180°W~180°ELatitude:70°S~70°NParameters:SalinityHorizontal Resolution:0.25° × 0.25°Vertical Resolution:41 levels (1-2000 m)Temporal Resolution:monthlyStorage Format:netcdf This product used a machine learning approach (feed-forward neural network - FFNN) to reconstruct a high-resolution (0.25° × 0.25°) ocean subsurface (1–2000 m) salinity dataset for the period 1993–2018 by merging in situ salinity profile observations with high-resolution (0.25° × 0.25°) satellite remote sensing altimetry absolute dynamic topography (ADT), sea surface temperature (SST), sea surface wind (SSW) field data, and a coarse resolution (1° × 1°) gridded salinity product. The new 0.25° × 0.25° reconstruction shows more realistic spatial signals in the regions with strong mesoscale variations, e.g., the Gulf Stream, Kuroshio, and Antarctic Circumpolar Current regions, than the 1° × 1° resolution product, indicating the efficiency of the machine learning approach in bringing satellite observations together with in situ observations. The large-scale salinity patterns from 0.25° × 0.25° data are consistent with the 1° × 1°gridded salinity field, suggesting the persistence of the large-scale signals in the high-resolution reconstruction.Time Range:1993.01-2018.12Region:GlobalLongitude:180°W~180°ELatitude:70°S~70°NParameters:SalinityHorizontal Resolution:0.25° × 0.25°Vertical Resolution:41 levels (1-2000 m)Temporal Resolution:monthlyStorage Format:netcdf

Global change drivers that modify the quality and quantity of litter inputs to soil affect greenhouse gas fluxes, and thereby constitute a feedback to climate change. Carbon cycling in the Yukon-Kuskokwim (Y-K) River Delta, a subarctic wetland system, is influenced by landscape variations in litter quality and quantity generated by herbivores (migratory birds) that create ‘grazing lawns’ of short stature, nitrogen-rich vegetation. To identify the mechanisms by which these changes in litter inputs affect soil carbon balance, we independently manipulated qualities and quantities of litter representative of levels found in the Y-K Delta in a fully factorial microcosm experiment. We measured carbon dioxide (CO2) fluxes from these microcosms weekly. To help us identify how litter inputs influenced greenhouse gas fluxes, we sequenced soil fungal and bacterial communities, and measured soil microbial biomass carbon, dissolved carbon, inorganic nitrogen, and enzyme activity. We found that positive correlations between litter input quantity and CO2 flux were dependent upon litter type, due to differences in litter stoichiometry and changes to the structure of decomposer communities, especially the soil fungi. These community shifts were particularly pronounced when litter was added in the form of herbivore feces, and in litter input treatments that induced nitrogen limitation (i.e., senesced litter). The sensitivity of carbon cycling to litter quality and quantity in this system demonstrates that herbivores can strongly impact greenhouse gas fluxes through their influence on plant growth and tissue chemistry.

This dataset includes the results summary from a lab-scale bioreactor experiment as discussed in the research paper with the same name, published at Processes MDPI (De Groof, V.; Coma, M.; Arnot, T.C.; Leak, D.J.; Lanham, A.B. Adjusting Organic Load as a Strategy to Direct Single-Stage Food Waste Fermentation from Anaerobic Digestion to Chain Elongation. Processes 2020, 8, 1487.). The study comprised two operational phases of duplicate reactors fed with food waste, each set to target a different product. The data comprises a summary on feedstock composition, microbial community analysis and operational conditions and product outcome per operational phase. The archaeal and bacterial community data includes the final sequences of the operational taxonomic units found and their relative abundance in each sample as determined by 16s rRNA amplicon sequencing. The raw data files have been submitted in the specialized EMBL-EBI database and are available under the accession number PRJEB39281. This dataset was prepared and processed in Microsoft Excel from raw analytical data. The bioinformatic processing prior to the microbial community summary in the spreadsheet was done as outlined in the publication, and results were processed via the DNASense data analysis app (applies Rstudio IDE v.3.5.1 with the ampvis v.2.5.8. package). This version includes rarefaction curves and values of alpha-diversity, richness and evenness per sample in the OTU_table tab. Analytical

Output data prepared for analysis of 25 diverse global cities by the Global Healthy and Sustainable City-Indicator Collaboration study, published in The Lancet Global Health Series on urban design, transport, and health. 2022. https://www.thelancet.com/series/urban-design-2022 Boeing, G. et al. (2022) ‘Using open data and open-source software to develop spatial indicators of urban design and transport features for achieving healthy and sustainable cities’, The Lancet Global Health, 10(6), pp. e907–e918. Available at: https://doi.org/10.1016/S2214-109X(22)00072-9. Data outputs were generated through use of the global-indicators software tool, designed for this study and available from: https://github.com/global-healthy-liveable-cities/global-indicators Further detail on the methods used is provided in the following publication: Liu, S., Higgs, C., Arundel, J., Boeing, G., Cerdera, N., Moctezuma, D., Cerin, E., Adlakha, D., Lowe, M. and Giles-Corti, B. (2021), A Generalized Framework for Measuring Pedestrian Accessibility around the World Using Open Data. Geogr Anal. https://doi.org/10.1111/gean.12290 The study made use of OpenStreetMap, Global Human Settlements and custom data, and is made available under the Open Database License: http://opendatacommons.org/licenses/odbl/1.0/. Any rights in individual contents of the database are licensed under the Database Contents License: http://opendatacommons.org/licenses/dbcl/1.0/

Enclosed are case study qualitative and quantitative data used to populate fuzzy cognitive maps that provide a framework for analysis of drivers and barriers to implementation of coastal risk management projects.

Triploidy could prevent escaped farm salmon breeding in the wild, while also improving nutrient quality within farmed fillets. Despite these potential advantages, triploid Atlantic salmon have not been widely used in aquaculture, and their reproductive function has yet to be fully evaluated. Here, we compare reproductive function and fillet composition between triploid and diploid farm salmon under standard aquaculture rearing conditions. We show that female triploids are sterile and do not develop gonads. In contrast, males produce large numbers of motile spermatozoa capable of fertilising wild salmon eggs. However, compared with diploids, reproductive development and survival rates of eggs fertilised by triploid males were significantly reduced, with less than 1% of eggs sired by triploid males reaching late eyed stages of development. Analyses of fillets showed that total lipid and fatty acid quantities were significantly lower in triploid compared to diploid Atlantic salmon fillets. However, when fatty acids were normalized to total lipid content, triploid fillets had significantly higher relative levels of important omega-3 Long Chain Polyunsaturated Fatty Acids. Our results show that: (1) escaped triploid farm salmon are very unlikely to reproduce in the wild; and (2) if able to match diploid fillet lipid content, triploid farm salmon could achieve better fillet quality in terms of essential fatty acids. Comparisons between diploid and triploid Atlantic salmonExcel file containing all the data collected during the investigation into the reproductive maturation of triploid Atlantic salmon, their fatty acid biochemistry and how they compare to diploid conspecifics

This dataset contains terrestrial fluxes of nitrous oxide (N2O), methane (CH4) and ecosystem respiration (carbon dioxide (CO2)) calculated from static chamber measurements in riparian buffers of oil palm plantations on mineral soil, in Riau, Sumatra, Indonesia. Measurements were made monthly, from January 2019 until September 2021, with a break from April 2019 to October 2019 to allow for felling and replanting, and another break from January 2021 to June 2021 due to Covid-19 restrictions. To help to reduce the environmental impact of oil palm plantations, riparian buffers are now required by regulations in many Southeast Asian countries. The experiments were conducted to investigate the impact of greenhouse gas emissions from the riparian buffers. Research was funded through NERC grant NE/R000131/1 Sustainable Use of Natural Resources to Improve Human Health and Support Economic Development (SUNRISE) Greenhouse gas concentrations were measured using static chambers, enclosed for 45 minutes. Multiple regressions (including linear and hierarchical multiple regression) were fitted to calculate the best fit flux, using the RCflux R package, written by Dr Peter Levy (UKCEH).

Twenty soil cores were collected from a field site in Lincolnshire in March 2011, three weeks after planting and Nitrogen fertiliser addition. Soil cores of 150-180 millimetre (mm) depth, containing approximately 1.6 kilogram soil (dry weight) were extracted in Polyvinyl chloride (PVC) pipes (height 215 mm depth 102 mm) and stored at 4 degrees centigrade for 30 days. A four-treatment factorial experiment was designed using soils un-amended or amended with biochar and un-wetted or wetted with deionised water (5 replicates per treatment). Soil in all the cores was mixed to 7 centimetre (cm) depth. To half of the cores, biochar (less than 2 mm) was mixed into the soil at a rate of 3 percent soil dry weight (approximately 22 tons per hectare (t ha-1)). After allowing for any potential Carbon dioxide (CO2) flush from newly-mixed soil to equilibrate for seven days, the cores were placed at 16 degrees centigrade in the dark. Un-wetted soil cores were maintained at 23 percent Gravimetric moisture content (GMC), whilst the GMC of 'wetted' soil cores was increased to 28 percent GMC at the time zero (t0) of four wetting events on day 17, 46, 67 and 116. These water addition rates were based on mean and maximum monthly soil GMC measured in the field between 2009-2010. Data from an investigation of the effects of biochar application to soil on greenhouse gas emissions using soil from a bioenergy crop (Miscanthus X. giganteus). Data include physical (bulk density) and chemical analyses of the soil (total carbon (C) and nitrogen (N), extractable ammonium and nitrate), and greenhouse gas (GHG) emissions (carbon dioxide (CO2), methane (CH4) and nitrous oxide (N2O)) during incubations. Data were collected during two incubation experiments investigating the effects of temperature, soil moisture and soil aeration on biochar induced suppression of GHG emissions. Biochar is a carbon rich substances which is being advocated as a climate mitigation tool to increase carbon sequestration and reduce nitrous oxide emissions.

Associated data and R code for the paper Epstein & Roberts 2022 - Identifying priority areas to manage mobile bottom fishing on seabed carbon in the UK. This repository contains the primary output data from a desk-based investigation of seabed sediment organic carbon (OC) and mobile demeresal fishing in the UKEEZ. Best available published datasets were combined to produce unified maps of predicted seabed OC stocks, mean annual mobile bottom fishing disturbance, mean value of fish landed by mobile bottom fishing, and mean annual cummulative disturbance to seabed carbon from mobile bottom fishing. This data was combined with modeling of estimated fishing displacement to idenitfy priority areas for managmement and/or future research. For further methodological information please refer to the full paper published at PLOS Climate.