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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Mattia Colacicco; Cosetta Ciliberti; Gennaro Agrimi; Antonino Biundo; +1 Authors

    The yeast Yarrowia lipolytica is an industrially relevant microorganism, which is able to convert low-value wastes into different high-value, bio-based products, such as enzymes, lipids, and other important metabolites. Waste cooking oil (WCO) represents one of the main streams generated in the food supply chain, especially from the domestic sector. The need to avoid its incorrect disposal makes this waste a resource for developing bioprocesses in the perspective of a circular bioeconomy. To this end, the strain Y. lipolytica W29 was used as a platform for the simultaneous production of intracellular lipids and extracellular lipases. Three different minimal media conditions with different pH controls were utilized in a small-scale (50 mL final volume) screening strategy, and the best condition was tested for an up-scaling procedure in higher volumes (800 mL) by selecting the best-performing possibility. The tested media were constituted by YNB media with high nitrogen restriction (1 g L−1 (NH4)2SO4) and different carbon sources (3% w v−1 glucose and 10% v v−1 WCO) with different levels of pH controls. Lipase production and SCO content were analyzed. A direct correlation was found between decreasing FFA availability in the media and increasing SCO levels and lipase activity. The simultaneous production of extracellular lipase (1.164 ± 0.025 U mL−1) and intracellular single-cell oil accumulation by Y. lipolytica W29 growing on WCO demonstrates the potential and the industrial relevance of this biorefinery model.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Energiesarrow_drop_down
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    Energies
    Article . 2022 . Peer-reviewed
    License: CC BY
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    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Energies
    Article . 2022
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Energiesarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      Energies
      Article . 2022 . Peer-reviewed
      License: CC BY
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      Energies
      Article . 2022
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: José Carlos Franco; Manuela Branco; Sofia Conde; André Garcia; +7 Authors

    Ecological infrastructures (EIs) are considered relevant components in agricultural landscapes to support biodiversity and ecosystem services. We used the predatory attacks on lepidopteran dummies as a proxy to assess predation rates in the agricultural matrix and different EIs types according to their location and vegetation structure. We aimed at comparing the effect of different types of EI on the predation intensity in two intensively irrigated agricultural areas located in the Sorraia and Tagus river valleys in central Portugal. We hypothesized that: (1) the predation rate would be higher near EIs compared with the agricultural matrix, (2) the positive effect of EIs on predation rate would differ with their typologies, and (3) the EIs’ proximity and proportion in the surrounding landscape would have a positive effect on the predation rate in agricultural fields. The EI typologies influenced differently the predator groups and the overall predation rate. Major differences were observed for bird predation, being higher in woody EIs. A positive correlation between predation rate and EIs area of the surrounding landscape, as well as a negative correlation with the distance to the nearest riparian and woody EIs, was observed for birds. The observed dissimilarities in the predators’ response may be related to habitat differences and its functional connectivity. The overall monthly low predation rates are possibly related to the intensive agricultural system and the small area occupied by EIs.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Sustainabilityarrow_drop_down
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    Sustainability
    Article . 2022 . Peer-reviewed
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    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Sustainability
    Article . 2022
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Sustainabilityarrow_drop_down
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      Sustainability
      Article . 2022 . Peer-reviewed
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      Sustainability
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Lana, Marcos A.; Eulenstein, Frank; Schlindwein, Sandro L.; Graef, Frieder; +2 Authors

    Maize is one of the world’s most important cereals, cultivated in a wide range of environments. Besides the importance of maize and the gains in yield from selection schemes, commercial breeding drastically reduced the number of cultivars of this crop. Current common sense states that hybrids, when compared to open-pollinated cultivars, are a better adaptation strategy to cope with the impacts of climate change. However, the performance and resilience of cultivars with different levels of improvement are still not explored in this context. Four cultivars—a commercial hybrid, one commercially improved open-pollinated, one improved open-pollinated derived from participatory breeding, and one from a farmer’s selection—were tested using the CERES-Maize crop model. Field experiments conducted in Brazil were used for calibration and evaluation. Synthetic scenarios of climate change resulted from the application of the incremental method on historical series of observations (30 years), with temperature increments ranging from +0.5 up to +3.0 °C and precipitation changes from −30 up to +30%. Planting dates consisted in nine dates (August 1–December 1, each 15 days). Results demonstrate that the model could mimic the phenology and yield of two improved open-pollinated cultivars (MPA01 and Fortuna) and the hybrid (AS1548). One open-pollinated cultivar could not be validated due to its high phenotypic variability. Yield response surfaces showed distinct impacts among cultivars, with improved open-pollinated cultivar MPA01 having a higher yield stability when compared to the hybrid. Early planting dates produced lower yields with higher risk of crop failure for all cultivars. Late planting dates produced higher yields with higher failure risk. Considering risk and yield, the best planting window for all cultivars and scenarios is between September and October. Our results demonstrate, for the first time, that improved open-pollinated cultivars are equivalent or more resilient than hybrids to yield changes under different scenarios of abiotic stresses.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Hyper Article en Lig...arrow_drop_down
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    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Agronomy for Sustainable Development
    Article . 2017 . Peer-reviewed
    License: CC BY
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    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Hyper Article en Lig...arrow_drop_down
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      Agronomy for Sustainable Development
      Article . 2017 . Peer-reviewed
      License: CC BY
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Miquel Ferrín; Laura Márquez; Henning Petersen; Sandrine Salmon; +14 Authors

    AbstractThe capacity to forecast the effects of climate change on biodiversity largely relies on identifying traits capturing mechanistic relationships with the environment through standardized field experiments distributed across relevant spatial scales. The effects of short‐term experimental manipulations on local communities may overlap with regional climate gradients that have been operating during longer time periods. However, to the best of our knowledge, there are no studies simultaneously assessing such long‐term macroecological drivers with local climate manipulations.We analysed this issue with springtails (Class Collembola), one of the dominant soil fauna groups, in a standardized climate manipulation experiment conducted across six European countries encompassing broad climate gradients. We combined community data (near 20K specimens classified into 102 species) with 22 eco‐morphological traits and reconstructed their phylogenetic relationships to track the evolution of adaptations to live at different soil depths, which is key to cope with desiccation. We then applied joint species distribution models to investigate the combined effect of the regional aridity gradient with the local experimental treatment (drought and warming) over the assembly of springtail communities and tested for significant trait–environment relationships mediating their community‐level responses.Our results show (1) a convergent evolution in all three major collembolan lineages of species adapted to inhabit at different soil strata; (2) a clear signature of aridity selecting traits of more epigeic species at a biogeographical scale and (3) the association of short‐term experimental drought with traits related to more euedaphic life‐forms.The hemiedaphic condition would be the plesiomorphic state for Collembola while the adaptations for an epigeic life would have been secondarily gained. Epigeic springtails are not only more resistant to drought, but also have a higher dispersal capacity that allows them to seek more favourable micro‐habitats after experiencing drier conditions. The observed relative edaphization of the springtail communities after short‐term experimental drought may thus be a transient community response.The disparity between macroecological trends and fast community‐level responses after climate manipulations highlights the need of simultaneously assessing long‐term and short‐term drivers at broad spatial scales to adequately interpret trait–environment relationships and better forecast biodiversity responses to climate change.Read the freePlain Language Summaryfor this article on the Journal blog.

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    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Functional Ecology
    Article . 2022 . Peer-reviewed
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ University of Copenh...arrow_drop_down
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      Functional Ecology
      Article . 2022 . Peer-reviewed
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    Authors: Berhongaray, G.; Kasmioui, el, O.; Ceulemans, R.;

    AbstractShort rotation woody crops (SRWCs) are being studied and cultivated because of their potential for bioenergy production. The harvest operation represents the highest input cost for these short rotation woody crops. We evaluated three different harvesting machines representing two harvesting systems at one operational large-scale SRWC plantation. On average, 8 ton ha−1 of biomass was harvested. The cut-and-chip harvesters were faster than the whole stem harvester; and the self-propelled harvester was faster than the tractor-pulled. Harvesting costs differed among the harvesting machines used and ranged from 388 € ha−1 to 541 € ha−1. The realized stem cutting heights were 15.46 cm and 16.00 cm for the tractor-pulled stem harvester and the self-propelled cut-and-chip harvester respectively, although a cutting height of 10 cm was requested in advance. From the potential harvestable biomass, only 77.4% was harvested by the self-propelled cut-and-chip harvester, while 94.5% was harvested by the tractor-pulled stem harvester. An increase of the machinery use efficiency (i.e. harvest losses, cost) is necessary to reduce costs and increase the competitiveness of biomass with other energy sources.

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    Biomass and Bioenergy
    Article . 2013 . Peer-reviewed
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    Biomass and Bioenergy
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      Biomass and Bioenergy
      Article . 2013 . Peer-reviewed
      License: CC BY NC ND
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
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    Authors: Kasper Kok; Rik Leemans; Rob Alkemade; Rob Alkemade; +1 Authors

    AbstractCentral Asian grasslands are extensively used for pastoral livestock grazing. This traditional land use is nowadays characterized by intensifying grasslands into more productive pastures. This change affects biodiversity and diminishes grasslands’ ecological role. Biodiversity impacts are probably also exacerbated by climate change. These changes in biodiversity are poorly studied in Central Asia. Here, we estimated potential biodiversity changes in the Central Asian grasslands using the latest shared socio-economic pathways and the representative concentration pathways (i.e., SSP-RCP scenario framework). We selected scenarios with contrasting socio-economic and climate conditions (i.e., SSP1-RCP4.5, SSP3-RCP8.5, SSP4-RCP4.5, and SSP5-RCP8.5) and further detailed the land-use scenarios for the region using stakeholders’ input. We indicated future biodiversity by the mean species abundance indicator. The contrasting scenario combinations showed that grasslands’ biodiversity will decline under each scenario. The strongest impact on biodiversity is expected in SSP5-RCP8.5, where half of the grasslands are likely to lose most of their local originally occurring species by 2100. The lowest impact is expected in SSP4-RCP4.5. Our study stresses the potential vulnerability of this region to increasing land-use intensity and climate change. These impact projections can help regional decision makers to develop and implement better biodiversity-conservation and sustainable management policies for these grasslands.

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    Regional Environmental Change
    Article . 2020 . Peer-reviewed
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    Regional Environmental Change
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    Wageningen Staff Publications
    Article . 2020
    License: CC BY
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      Regional Environmental Change
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      Wageningen Staff Publications
      Article . 2020
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    Authors: Loïc Chalmandrier; Jonathan Lenoir; Martin A. Nuñez; Treena I. Burgess; +14 Authors

    AbstractRapid climatic changes and increasing human influence at high elevations around the world will have profound impacts on mountain biodiversity. However, forecasts from statistical models (e.g. species distribution models) rarely consider that plant community changes could substantially lag behind climatic changes, hindering our ability to make temporally realistic projections for the coming century. Indeed, the magnitudes of lags, and the relative importance of the different factors giving rise to them, remain poorly understood. We review evidence for three types of lag: “dispersal lags” affecting plant species’ spread along elevational gradients, “establishment lags” following their arrival in recipient communities, and “extinction lags” of resident species. Variation in lags is explained by variation among species in physiological and demographic responses, by effects of altered biotic interactions, and by aspects of the physical environment. Of these, altered biotic interactions could contribute substantially to establishment and extinction lags, yet impacts of biotic interactions on range dynamics are poorly understood. We develop a mechanistic community model to illustrate how species turnover in future communities might lag behind simple expectations based on species’ range shifts with unlimited dispersal. The model shows a combined contribution of altered biotic interactions and dispersal lags to plant community turnover along an elevational gradient following climate warming. Our review and simulation support the view that accounting for disequilibrium range dynamics will be essential for realistic forecasts of patterns of biodiversity under climate change, with implications for the conservation of mountain species and the ecosystem functions they provide.

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    Global Change Biology
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    Global Change Biology
    Article . 2017 . Peer-reviewed
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    Article . 2018 . Peer-reviewed
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      Global Change Biology
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      Global Change Biology
      Article . 2017 . Peer-reviewed
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    Authors: Tanja Pyhäjärvi; Outi Savolainen; Sonja T. Kujala; Sandra Cervantes; +12 Authors

    Summary Understanding the dynamics of selection is key to predicting the response of tree species to new environmental conditions in the current context of climate change. However, selection patterns acting on early recruitment stages and their climatic drivers remain largely unknown in most tree species, despite being a critical period of their life cycle. We measured phenotypic selection on Pinus sylvestris seed mass, emergence time and early growth rate over 2 yr in four common garden experiments established along the latitudinal gradient of the species in Europe. Significant phenotypic plasticity and among‐population genetic variation were found for all measured phenotypic traits. Heat and drought negatively affected fitness in the southern sites, but heavy rainfalls also decreased early survival in middle latitudes. Climate‐driven directional selection was found for higher seed mass and earlier emergence time, while the form of selection on seedling growth rates differed among sites and populations. Evidence of adaptive and maladaptive phenotypic plasticity was found for emergence time and early growth rate, respectively. Seed mass, emergence time and early growth rate have an adaptive role in the early stages of P. sylvestris and climate strongly influences the patterns of selection on these fitness‐related traits.

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    New Phytologist
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    Recolector de Ciencia Abierta, RECOLECTA
    Article . 2021 . Peer-reviewed
    License: CC BY NC ND
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    New Phytologist
    Article . 2020 . Peer-reviewed
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    Article . 2021
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      Recolector de Ciencia Abierta, RECOLECTA
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      New Phytologist
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    Authors: Parent, Boris,; Tardieu, Francois,;

    A crop model with genetic inputs can potentially simulate yield for a large range of genotypes, sites, and years, thereby indicating where and when a given combination of alleles confers a positive effect. We discuss to what extent current crop models, developed for predicting the effects of climate or cultivation techniques on a reference genotype, are adequate for ranking yields of a large number of genotypes in climatic scenarios with water deficit or high temperatures. We compare here the algorithms involved in 19 crop models. Marked differences exist in the representation of the combined effects of temperature and water deficit on plant development, and in the coordination of these effects with biomass production. The current literature suggests that these differences have a small impact on the yield prediction of a reference genotype because errors on the effects of different traits compensate each other. We propose that they have a larger impact if the crop model is used in a genetic context, because the model has to account for the genetic variability of studied traits. Models with explicit genetic inputs will be increasingly feasible because model parameters corresponding to each genotype can now be measured in phenotyping platforms for large plant collections. This will in turn allow prediction of parameter values from the allelic composition of genotypes. It is therefore timely to adapt crop models to this new context to simulate the allelic effects in present or future climatic scenarios with water or heat stresses.

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    Journal of Experimental Botany
    Article . 2014 . Peer-reviewed
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      Journal of Experimental Botany
      Article . 2014 . Peer-reviewed
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    Authors: Annette Leingärtner; Jochen Krauss; Bernhard Hoiss; Ingolf Steffan-Dewenter;

    Climatic extreme events can cause the shift or disruption of plant-insect interactions due to altered plant quality, e.g. leaf carbon to nitrogen ratios, and phenology. However, the response of plant-herbivore interactions to extreme events and climatic gradients has been rarely studied, although climatic extremes will increase in frequency and intensity in the future and insect herbivores represent a highly diverse and functionally important group. We set up a replicated climate change experiment along elevational gradients in the German Alps to study the responses of three plant guilds and their herbivory by insects to extreme events (extreme drought, advanced and delayed snowmelt) versus control plots under different climatic conditions on 15 grassland sites. Our results indicate that elevational shifts in CN (carbon to nitrogen) ratios and herbivory depend on plant guild and season. CN ratios increased with altitude for grasses, but decreased for legumes and other forbs. In contrast to our hypotheses, extreme climatic events did not significantly affect CN ratios and herbivory. Thus, our study indicates that nutritional quality of plants and antagonistic interactions with insect herbivores are robust against seasonal climatic extremes. Across the three functional plant guilds, herbivory increased with nitrogen concentrations. Further, increased CN ratios indicate a reduction in nutritional plant quality with advancing season. Although our results revealed no direct effects of extreme climatic events, the opposing responses of plant guilds along elevation imply that competitive interactions within plant communities might change under future climates, with unknown consequences for plant-herbivore interactions and plant community composition.

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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Mattia Colacicco; Cosetta Ciliberti; Gennaro Agrimi; Antonino Biundo; +1 Authors

    The yeast Yarrowia lipolytica is an industrially relevant microorganism, which is able to convert low-value wastes into different high-value, bio-based products, such as enzymes, lipids, and other important metabolites. Waste cooking oil (WCO) represents one of the main streams generated in the food supply chain, especially from the domestic sector. The need to avoid its incorrect disposal makes this waste a resource for developing bioprocesses in the perspective of a circular bioeconomy. To this end, the strain Y. lipolytica W29 was used as a platform for the simultaneous production of intracellular lipids and extracellular lipases. Three different minimal media conditions with different pH controls were utilized in a small-scale (50 mL final volume) screening strategy, and the best condition was tested for an up-scaling procedure in higher volumes (800 mL) by selecting the best-performing possibility. The tested media were constituted by YNB media with high nitrogen restriction (1 g L−1 (NH4)2SO4) and different carbon sources (3% w v−1 glucose and 10% v v−1 WCO) with different levels of pH controls. Lipase production and SCO content were analyzed. A direct correlation was found between decreasing FFA availability in the media and increasing SCO levels and lipase activity. The simultaneous production of extracellular lipase (1.164 ± 0.025 U mL−1) and intracellular single-cell oil accumulation by Y. lipolytica W29 growing on WCO demonstrates the potential and the industrial relevance of this biorefinery model.

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    Energies
    Article . 2022 . Peer-reviewed
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      Energies
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: José Carlos Franco; Manuela Branco; Sofia Conde; André Garcia; +7 Authors

    Ecological infrastructures (EIs) are considered relevant components in agricultural landscapes to support biodiversity and ecosystem services. We used the predatory attacks on lepidopteran dummies as a proxy to assess predation rates in the agricultural matrix and different EIs types according to their location and vegetation structure. We aimed at comparing the effect of different types of EI on the predation intensity in two intensively irrigated agricultural areas located in the Sorraia and Tagus river valleys in central Portugal. We hypothesized that: (1) the predation rate would be higher near EIs compared with the agricultural matrix, (2) the positive effect of EIs on predation rate would differ with their typologies, and (3) the EIs’ proximity and proportion in the surrounding landscape would have a positive effect on the predation rate in agricultural fields. The EI typologies influenced differently the predator groups and the overall predation rate. Major differences were observed for bird predation, being higher in woody EIs. A positive correlation between predation rate and EIs area of the surrounding landscape, as well as a negative correlation with the distance to the nearest riparian and woody EIs, was observed for birds. The observed dissimilarities in the predators’ response may be related to habitat differences and its functional connectivity. The overall monthly low predation rates are possibly related to the intensive agricultural system and the small area occupied by EIs.

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    Article . 2022
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Lana, Marcos A.; Eulenstein, Frank; Schlindwein, Sandro L.; Graef, Frieder; +2 Authors

    Maize is one of the world’s most important cereals, cultivated in a wide range of environments. Besides the importance of maize and the gains in yield from selection schemes, commercial breeding drastically reduced the number of cultivars of this crop. Current common sense states that hybrids, when compared to open-pollinated cultivars, are a better adaptation strategy to cope with the impacts of climate change. However, the performance and resilience of cultivars with different levels of improvement are still not explored in this context. Four cultivars—a commercial hybrid, one commercially improved open-pollinated, one improved open-pollinated derived from participatory breeding, and one from a farmer’s selection—were tested using the CERES-Maize crop model. Field experiments conducted in Brazil were used for calibration and evaluation. Synthetic scenarios of climate change resulted from the application of the incremental method on historical series of observations (30 years), with temperature increments ranging from +0.5 up to +3.0 °C and precipitation changes from −30 up to +30%. Planting dates consisted in nine dates (August 1–December 1, each 15 days). Results demonstrate that the model could mimic the phenology and yield of two improved open-pollinated cultivars (MPA01 and Fortuna) and the hybrid (AS1548). One open-pollinated cultivar could not be validated due to its high phenotypic variability. Yield response surfaces showed distinct impacts among cultivars, with improved open-pollinated cultivar MPA01 having a higher yield stability when compared to the hybrid. Early planting dates produced lower yields with higher risk of crop failure for all cultivars. Late planting dates produced higher yields with higher failure risk. Considering risk and yield, the best planting window for all cultivars and scenarios is between September and October. Our results demonstrate, for the first time, that improved open-pollinated cultivars are equivalent or more resilient than hybrids to yield changes under different scenarios of abiotic stresses.

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    Agronomy for Sustainable Development
    Article . 2017 . Peer-reviewed
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      Agronomy for Sustainable Development
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    Authors: Miquel Ferrín; Laura Márquez; Henning Petersen; Sandrine Salmon; +14 Authors

    AbstractThe capacity to forecast the effects of climate change on biodiversity largely relies on identifying traits capturing mechanistic relationships with the environment through standardized field experiments distributed across relevant spatial scales. The effects of short‐term experimental manipulations on local communities may overlap with regional climate gradients that have been operating during longer time periods. However, to the best of our knowledge, there are no studies simultaneously assessing such long‐term macroecological drivers with local climate manipulations.We analysed this issue with springtails (Class Collembola), one of the dominant soil fauna groups, in a standardized climate manipulation experiment conducted across six European countries encompassing broad climate gradients. We combined community data (near 20K specimens classified into 102 species) with 22 eco‐morphological traits and reconstructed their phylogenetic relationships to track the evolution of adaptations to live at different soil depths, which is key to cope with desiccation. We then applied joint species distribution models to investigate the combined effect of the regional aridity gradient with the local experimental treatment (drought and warming) over the assembly of springtail communities and tested for significant trait–environment relationships mediating their community‐level responses.Our results show (1) a convergent evolution in all three major collembolan lineages of species adapted to inhabit at different soil strata; (2) a clear signature of aridity selecting traits of more epigeic species at a biogeographical scale and (3) the association of short‐term experimental drought with traits related to more euedaphic life‐forms.The hemiedaphic condition would be the plesiomorphic state for Collembola while the adaptations for an epigeic life would have been secondarily gained. Epigeic springtails are not only more resistant to drought, but also have a higher dispersal capacity that allows them to seek more favourable micro‐habitats after experiencing drier conditions. The observed relative edaphization of the springtail communities after short‐term experimental drought may thus be a transient community response.The disparity between macroecological trends and fast community‐level responses after climate manipulations highlights the need of simultaneously assessing long‐term and short‐term drivers at broad spatial scales to adequately interpret trait–environment relationships and better forecast biodiversity responses to climate change.Read the freePlain Language Summaryfor this article on the Journal blog.

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    Functional Ecology
    Article . 2022 . Peer-reviewed
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      Functional Ecology
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    Authors: Berhongaray, G.; Kasmioui, el, O.; Ceulemans, R.;

    AbstractShort rotation woody crops (SRWCs) are being studied and cultivated because of their potential for bioenergy production. The harvest operation represents the highest input cost for these short rotation woody crops. We evaluated three different harvesting machines representing two harvesting systems at one operational large-scale SRWC plantation. On average, 8 ton ha−1 of biomass was harvested. The cut-and-chip harvesters were faster than the whole stem harvester; and the self-propelled harvester was faster than the tractor-pulled. Harvesting costs differed among the harvesting machines used and ranged from 388 € ha−1 to 541 € ha−1. The realized stem cutting heights were 15.46 cm and 16.00 cm for the tractor-pulled stem harvester and the self-propelled cut-and-chip harvester respectively, although a cutting height of 10 cm was requested in advance. From the potential harvestable biomass, only 77.4% was harvested by the self-propelled cut-and-chip harvester, while 94.5% was harvested by the tractor-pulled stem harvester. An increase of the machinery use efficiency (i.e. harvest losses, cost) is necessary to reduce costs and increase the competitiveness of biomass with other energy sources.

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    Biomass and Bioenergy
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    Biomass and Bioenergy
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      Biomass and Bioenergy
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    Authors: Kasper Kok; Rik Leemans; Rob Alkemade; Rob Alkemade; +1 Authors

    AbstractCentral Asian grasslands are extensively used for pastoral livestock grazing. This traditional land use is nowadays characterized by intensifying grasslands into more productive pastures. This change affects biodiversity and diminishes grasslands’ ecological role. Biodiversity impacts are probably also exacerbated by climate change. These changes in biodiversity are poorly studied in Central Asia. Here, we estimated potential biodiversity changes in the Central Asian grasslands using the latest shared socio-economic pathways and the representative concentration pathways (i.e., SSP-RCP scenario framework). We selected scenarios with contrasting socio-economic and climate conditions (i.e., SSP1-RCP4.5, SSP3-RCP8.5, SSP4-RCP4.5, and SSP5-RCP8.5) and further detailed the land-use scenarios for the region using stakeholders’ input. We indicated future biodiversity by the mean species abundance indicator. The contrasting scenario combinations showed that grasslands’ biodiversity will decline under each scenario. The strongest impact on biodiversity is expected in SSP5-RCP8.5, where half of the grasslands are likely to lose most of their local originally occurring species by 2100. The lowest impact is expected in SSP4-RCP4.5. Our study stresses the potential vulnerability of this region to increasing land-use intensity and climate change. These impact projections can help regional decision makers to develop and implement better biodiversity-conservation and sustainable management policies for these grasslands.

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    Regional Environmental Change
    Article . 2020 . Peer-reviewed
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    Regional Environmental Change
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    Wageningen Staff Publications
    Article . 2020
    License: CC BY
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      Regional Environmental Change
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      Regional Environmental Change
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      Wageningen Staff Publications
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    Authors: Loïc Chalmandrier; Jonathan Lenoir; Martin A. Nuñez; Treena I. Burgess; +14 Authors

    AbstractRapid climatic changes and increasing human influence at high elevations around the world will have profound impacts on mountain biodiversity. However, forecasts from statistical models (e.g. species distribution models) rarely consider that plant community changes could substantially lag behind climatic changes, hindering our ability to make temporally realistic projections for the coming century. Indeed, the magnitudes of lags, and the relative importance of the different factors giving rise to them, remain poorly understood. We review evidence for three types of lag: “dispersal lags” affecting plant species’ spread along elevational gradients, “establishment lags” following their arrival in recipient communities, and “extinction lags” of resident species. Variation in lags is explained by variation among species in physiological and demographic responses, by effects of altered biotic interactions, and by aspects of the physical environment. Of these, altered biotic interactions could contribute substantially to establishment and extinction lags, yet impacts of biotic interactions on range dynamics are poorly understood. We develop a mechanistic community model to illustrate how species turnover in future communities might lag behind simple expectations based on species’ range shifts with unlimited dispersal. The model shows a combined contribution of altered biotic interactions and dispersal lags to plant community turnover along an elevational gradient following climate warming. Our review and simulation support the view that accounting for disequilibrium range dynamics will be essential for realistic forecasts of patterns of biodiversity under climate change, with implications for the conservation of mountain species and the ecosystem functions they provide.

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    Global Change Biology
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    Global Change Biology
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      Global Change Biology
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    Authors: Tanja Pyhäjärvi; Outi Savolainen; Sonja T. Kujala; Sandra Cervantes; +12 Authors

    Summary Understanding the dynamics of selection is key to predicting the response of tree species to new environmental conditions in the current context of climate change. However, selection patterns acting on early recruitment stages and their climatic drivers remain largely unknown in most tree species, despite being a critical period of their life cycle. We measured phenotypic selection on Pinus sylvestris seed mass, emergence time and early growth rate over 2 yr in four common garden experiments established along the latitudinal gradient of the species in Europe. Significant phenotypic plasticity and among‐population genetic variation were found for all measured phenotypic traits. Heat and drought negatively affected fitness in the southern sites, but heavy rainfalls also decreased early survival in middle latitudes. Climate‐driven directional selection was found for higher seed mass and earlier emergence time, while the form of selection on seedling growth rates differed among sites and populations. Evidence of adaptive and maladaptive phenotypic plasticity was found for emergence time and early growth rate, respectively. Seed mass, emergence time and early growth rate have an adaptive role in the early stages of P. sylvestris and climate strongly influences the patterns of selection on these fitness‐related traits.

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    Recolector de Ciencia Abierta, RECOLECTA
    Article . 2021 . Peer-reviewed
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    New Phytologist
    Article . 2020 . Peer-reviewed
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    Article . 2021
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      Recolector de Ciencia Abierta, RECOLECTA
      Article . 2021 . Peer-reviewed
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      New Phytologist
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    Authors: Parent, Boris,; Tardieu, Francois,;

    A crop model with genetic inputs can potentially simulate yield for a large range of genotypes, sites, and years, thereby indicating where and when a given combination of alleles confers a positive effect. We discuss to what extent current crop models, developed for predicting the effects of climate or cultivation techniques on a reference genotype, are adequate for ranking yields of a large number of genotypes in climatic scenarios with water deficit or high temperatures. We compare here the algorithms involved in 19 crop models. Marked differences exist in the representation of the combined effects of temperature and water deficit on plant development, and in the coordination of these effects with biomass production. The current literature suggests that these differences have a small impact on the yield prediction of a reference genotype because errors on the effects of different traits compensate each other. We propose that they have a larger impact if the crop model is used in a genetic context, because the model has to account for the genetic variability of studied traits. Models with explicit genetic inputs will be increasingly feasible because model parameters corresponding to each genotype can now be measured in phenotyping platforms for large plant collections. This will in turn allow prediction of parameter values from the allelic composition of genotypes. It is therefore timely to adapt crop models to this new context to simulate the allelic effects in present or future climatic scenarios with water or heat stresses.

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    Journal of Experimental Botany
    Article . 2014 . Peer-reviewed
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      Journal of Experimental Botany
      Article . 2014 . Peer-reviewed
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    Authors: Annette Leingärtner; Jochen Krauss; Bernhard Hoiss; Ingolf Steffan-Dewenter;

    Climatic extreme events can cause the shift or disruption of plant-insect interactions due to altered plant quality, e.g. leaf carbon to nitrogen ratios, and phenology. However, the response of plant-herbivore interactions to extreme events and climatic gradients has been rarely studied, although climatic extremes will increase in frequency and intensity in the future and insect herbivores represent a highly diverse and functionally important group. We set up a replicated climate change experiment along elevational gradients in the German Alps to study the responses of three plant guilds and their herbivory by insects to extreme events (extreme drought, advanced and delayed snowmelt) versus control plots under different climatic conditions on 15 grassland sites. Our results indicate that elevational shifts in CN (carbon to nitrogen) ratios and herbivory depend on plant guild and season. CN ratios increased with altitude for grasses, but decreased for legumes and other forbs. In contrast to our hypotheses, extreme climatic events did not significantly affect CN ratios and herbivory. Thus, our study indicates that nutritional quality of plants and antagonistic interactions with insect herbivores are robust against seasonal climatic extremes. Across the three functional plant guilds, herbivory increased with nitrogen concentrations. Further, increased CN ratios indicate a reduction in nutritional plant quality with advancing season. Although our results revealed no direct effects of extreme climatic events, the opposing responses of plant guilds along elevation imply that competitive interactions within plant communities might change under future climates, with unknown consequences for plant-herbivore interactions and plant community composition.

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    PLoS ONE
    Article . 2014 . Peer-reviewed
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    Article . 2015
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