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# Coral reef state influences resilience to acute climate-mediated disturbances\_Table S1 [https://doi.org/10.5061/dryad.rfj6q57gz](https://doi.org/10.5061/dryad.rfj6q57gz) The dataset provides a summary of all publications included in the analysis for this study and the key statistics obtained from the studies and used in the analyses. The dataset includes details about the publication, spatial identifiers (e.g. realm, province, ecoregion) unique site code, information on the disturbance type and timing, the pre-and post-disturbance coral cover, the 5-year annual recovery rate, the recovery shape and recovery completeness classifications. Please see details Methods in the journal article "Coral reef state influences resilience to acute climate-mediated disturbances" as published in Global Ecology and Biogeography. ## Description of the data and file structure Each column provides the following information: | Column | Detail | | ------ | ------ | | Realm | All studies were assigned to an ‘ecoregion’, ‘province’ and ‘realm’ based on their spatial location in Spalding et al. (2007)’s spatial classification system for coastal and shelf waters. | | Province | All studies were assigned to an ‘ecoregion’, ‘province’ and ‘realm’ based on their spatial location in Spalding et al. (2007)’s spatial classification system for coastal and shelf waters. | | Ecoregion | All studies were assigned to an ‘ecoregion’, ‘province’ and ‘realm’ based on their spatial location in Spalding et al. (2007)’s spatial classification system for coastal and shelf waters. | | Unique study identifier | Unique identifiers for the lowest sampling unit in the dataset. In cases where there were data for different regions, reefs, islands/atolls, sites, reef zones, depths, and/or multiple disturbances within a publication or time-series, data from these publications were divided into separate ‘studies’. | | Publication/Dataset | Unique identifiers for the publication or dataset (generally the surname of the first author followed by the year of publication). | | Publication title | Title of the publication or dataset from which the data were sourced. | | Publication year | Year the publication from the which the data were sourced was published. | | Country/Territory | Name of the country or location from which the data came. | | Site latitude | Latitude of the study site from where the data came. | | Site longitude | Longitude of the study site from where the data came. | | Disturbance type | Classification of disturbance: Temperature stress, Cyclone/ severe storm, Runoff or Multiple. | | Disturbance.year | Year of the disturbance. | | Mean coral cover pre-disturbance | Pre-disturbance coral cover as extracted from the publication or dataset as the closest data point prior to disturbance. If there is an NA value in this column then there was no pre-disturbance data available and a measure of impact was not calculated. | | Mean coral cover post-disturbance | Post-disturbance coral cover as extracted from the publication or dataset as the closest data point prior to disturbance. If there is an NA value in this column then there was no pre-disturbance data available and a measure of impact was not calculated. | | Impact (lnRR) | Impact measure: the log response ratio of pre- to post-disturbance percentage coral cover. If there is an NA value in this column then there was no pre-disturbance data available and a measure of impact was not calculated. | | Time-averaged recovery rate | Recovery rate as percentage coral cover per year in the approximate 5-year time window following disturbance. See main Methods text in manuscript for more detail. If there is an NA value in this column then the available time-series following disturbance did not satisfy the criteria for inclusion in the calculation of recovery rate. | | Recovery shape | Recovery shape category: linear, accelerating, decelerating, logistic, flatline or null. If there is an NA value in this column then the available time-series following disturbance did not satisfy the criteria for inclusion in classification of recovery shape. | | Recovery completeness | Recovery completeness category: complete recovery – coral is observed to reach its pre-disturbance coral cover, signs of recovery – a positive trajectory but not reaching pre-disturbance cover in the time period examined, undetermined – no clear pattern in recovery, the null model was the top model, no recovery – the null model was the top model but the linear model had slope and standard error in slope near zero and further decline – the top model had a negative trend. If there is an NA value in this column then the available time-series following disturbance did not satisfy the criteria for inclusion in classification of recovery shape. | | Reference | Source for the data. | ## Sharing/Access information Data was derived from the following sources: **Appendix 1. Full list of references providing the data used in impact and recovery analyses supporting Table S1** Arceo, H. O., Quibilan, M. C., Aliño, P. M., Lim, G., & Licuanan, W. Y. (2001). Coral bleaching in Philippine reefs: Coincident evidences with mesoscale thermal anomalies. Bulletin of Marine Science, 69(2), 579-593. Aronson, R. B., Precht, W. F., Toscano, M. A., & Koltes, K. H. (2002). The 1998 bleaching event and its aftermath on a coral reef in Belize. Marine Biology, 141(3), 435-447. Aronson, R. B., Sebens, K. P., & Ebersole, J. P. (1994). Hurricane Hugo's impact on Salt River submarine canyon, St. Croix, US Virgin Islands. Proceedings of the colloquium on global aspects of coral reefs, Miami, 1993, 189-195. Bahr, K. D., Rodgers, K. S., & Jokiel, P. L. (2017). Impact of three bleaching events on the reef resiliency of Kāne'ohe Bay, Hawai'i. Frontiers in Marine Science, 4(DEC). Baird, A. H., Álvarez-Noriega, M., Cumbo, V. R., Connolly, S. R., Dornelas, M., & Madin, J. S. (2018). Effects of tropical storms on the demography of reef corals. Marine Ecology Progress Series, 606, 29-38. Barranco, L. M., Carriquiry, J. D., Rodríguez-Zaragoza, F. A., Cupul-Magaña, A. L., Villaescusa, J. A., & Calderón-Aguilera, L. E. (2016). Spatiotemporal variations of live coral cover in the Northern Mesoamerican reef system, Yucatan Peninsula, Mexico. Scientia Marina, 80(2), 143-150. Bastidas, C., Bone, D., Croquer, A., Debrot, D., Garcia, E., Humanes, A., . . . Rodríguez, S. (2012). Massive hard coral loss after a severe bleaching event in 2010 at Los Roques, Venezuela. Revista de Biologia Tropical, 60(SUPPL. 1), 29-37. Booth, D. J., & Beretta, G. A. (2002). Changes in a fish assemblage after a coral bleaching event. Marine Ecology Progress Series, 245, 205-212. Brandl, S. J., Emslie, M. J., & Ceccarelli, D. M. (2016). Habitat degradation increases functional originality in highly diverse coral reef fish assemblages. Ecosphere, 7(11). Brown, D., & Edmunds, P. J. (2013). Long-term changes in the population dynamics of the Caribbean hydrocoral Millepora spp. Journal of Experimental Marine Biology and Ecology, 441, 62-70. Brown, V. B., Davies, S. A., & Synnot, R. N. (1990). Long-term Monitoring of the Effects of Treated Sewage Effluent on the Intertidal Macroalgal Community Near Cape Schanck, Victoria, Australia. Botanica Marina, 33(1), 85-98. Bruckner, A. W., Coward, G., Bimson, K., & Rattanawongwan, T. (2017). Predation by feeding aggregations of Drupella spp. inhibits the recovery of reefs damaged by a mass bleaching event. Coral Reefs, 36(4), 1181-1187. Burt, J. 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Mass coral bleaching due to unprecedented marine heatwave in Papahānaumokuākea Marine National Monument (Northwestern Hawaiian Islands). PLoS ONE, 12(9). Crabbe, M. J. C. (2014). Evidence of initial coral community recovery at Discovery Bay on Jamaica’s north coast. Revista de Biologia Tropical, 62, 137-140. Crosbie, A. J., Bridge, T. C., Jones, G., & Baird, A. H. (2019). Response of reef corals and fish at Osprey Reef to a thermal anomaly across a 30 m depth gradient. Marine Ecology Progress Series, 622, 93-102. Darling, E. S., McClanahan, T. R., & Côté, I. M. (2010). Combined effects of two stressors on Kenyan coral reefs are additive or antagonistic, not synergistic. Conservation Letters, 3(2), 122-130. De Bakker, D. M., Meesters, E. H., Bak, R. P. M., Nieuwland, G., & Van Duyl, F. C. (2016). Long-term Shifts in Coral Communities On Shallow to Deep Reef Slopes of Curaçao and Bonaire: Are There Any Winners? Frontiers in Marine Science, 3(247). Depczynski, M., Gilmour, J. 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(2016). 27 years of benthic and coral community dynamics on turbid, highly urbanised reefs off Singapore. Scientific Reports, 6. Guillemot, N., Chabanet, P., & Le Pape, O. (2010). Cyclone effects on coral reef habitats in New Caledonia (South Pacific). Coral Reefs, 29(2), 445-453. Guzmán, H. M., & Cortés, J. (2001). Changes in reef community structure after fifteen years of natural disturbances in the Eastern Pacific (Costa Rica). Bulletin of Marine Science, 69(1), 133-149. Guzman, H. M., Cortes, J., Richmond, R. H., & Glynn, P. W. (1987). Effects of "El Nino - Southern oscillation' 1982/83 in the coral reefs at Isla del Cano, Costa Rica. Revista de Biologia Tropical, 35(2), 325-332. Haapkylä, J., Melbourne-Thomas, J., Flavell, M., & Willis, B. L. (2013). Disease outbreaks, bleaching and a cyclone drive changes in coral assemblages on an inshore reef of the Great Barrier Reef. Coral Reefs, 32(3), 815-824. Hagan, A., & Spencer, T. (2008). Reef resilience and change 1998–2007, Alphonse Atoll, Seychelles. Paper presented at the Proc 11th Int Coral Reef Symp. Harii, S., Hongo, C., Ishihara, M., Ide, Y., & Kayanne, H. (2014). Impacts of multiple disturbances on coral communities at Ishigaki Island, Okinawa, Japan, during a 15 year survey. Marine Ecology Progress Series, 509, 171-180. Harrison, H. B., Álvarez-Noriega, M., Baird, A. H., Heron, S. F., MacDonald, C., & Hughes, T. P. (2018). Back-to-back coral bleaching events on isolated atolls in the Coral Sea. Coral Reefs. Holbrook, S. J., Adam, T. C., Edmunds, P. J., Schmitt, R. J., Carpenter, R. C., Brooks, A. J., . . . Briggs, C. J. (2018). Recruitment Drives Spatial Variation in Recovery Rates of Resilient Coral Reefs. Scientific Reports, 8(1). Hongo, C., & Yamano, H. (2013). Species-Specific Responses of Corals to Bleaching Events on Anthropogenically Turbid Reefs on Okinawa Island, Japan, over a 15-year Period (1995-2009). PLoS ONE, 8(4). 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Three decades of coral reef community dynamics in St. John, USVI: A contrast of scleractinians and octocorals. Ecosphere, 8(1). Van Woesik, R., De Vantier, L. M., & Glazebrook, J. S. (1995). Effects of Cyclone "Joy' on nearshore coral communities of the Great Barrier Reef. Marine Ecology Progress Series, 128(1-3), 261-270. Van Woesik, R., Sakai, K., Ganase, A., & Loya, Y. (2011). Revisiting the winners and the losers a decade after coral bleaching. Marine Ecology Progress Series, 434, 67-76. Vercelloni, J., Kayal, M., Chancerelle, Y., & Planes, S. (2019). Exposure, vulnerability, and resiliency of French Polynesian coral reefs to environmental disturbances. Scientific Reports, 9(1). Walsh, W. J. (1983). Stability of a coral reef fish community following a catastrophic storm. Coral Reefs, 2(1), 49-63. Wilkinson, C. (2004). Status of coral reefs of the world: 2004 (Vol. 2). Queensland, Australia: Global Coral Reef Monitoring Network. Wilkinson, C. R., & Souter, D. (2008). Status of Caribbean coral reefs after bleaching and hurricanes in 2005. Wismer, S., Tebbett, S. B., Streit, R. P., & Bellwood, D. R. (2019). Spatial mismatch in fish and coral loss following 2016 mass coral bleaching. Science of the Total Environment, 650, 1487-1498. Woolsey, E., Bainbridge, S. J., Kingsford, M. J., & Byrne, M. (2012). Impacts of cyclone Hamish at One Tree Reef: Integrating environmental and benthic habitat data. Marine Biology, 159(4), 793-803. Aim: Understand the interplay between resistance and recovery on coral reefs, and investigate dependence on pre- and post-disturbance states, to inform generalisable reef resilience theory across large spatial and temporal scales. Location: Tropical coral reefs globally. Time period: 1966 to 2017. Major taxa studied: Scleratinian hard corals. Methods: We conducted a literature search to compile a global dataset of total coral cover before and after acute storms, temperature stress, and coastal runoff from flooding events. We used meta-regression to identify variables that explained significant variation in disturbance impact, including disturbance type, year, depth, and pre-disturbance coral cover. We further investigated the influence of these same variables, as well as post-disturbance coral cover and disturbance impact, on recovery rate. We examined the shape of recovery, assigning qualitatively distinct, ecologically relevant, population growth trajectories: linear, logistic, logarithmic (decelerating), and a second-order quadratic (accelerating). Results: We analysed 427 disturbance impacts and 117 recovery trajectories. Accelerating and logistic were the most common recovery shapes, underscoring non-linearities and recovery lags. A complex but meaningful relationship between the state of a reef pre- and post-disturbance, disturbance impact magnitude, and recovery rate was identified. Fastest recovery rates were predicted for intermediate to large disturbance impacts, but a decline in this rate was predicted when more than ~75% of pre-disturbance cover was lost. We identified a shifting baseline, with declines in both pre-and post-disturbance coral cover over the 50 year study period. Main conclusions: We breakdown the complexities of coral resilience, showing interplay between resistance and recovery, as well as dependence on both pre- and post-disturbance states, alongside documenting a chronic decline in these states. This has implications for predicting coral reef futures and implementing actions to enhance resilience. The dataset provides a summary of all studies included in the analysis and the key statistics obtained from the studies and used in the analyses for the manuscript entitled "Coral reef state influences resilience to acute climate-mediated disturbances" as published in Global Ecology and Biogeography. The dataset includes details about the publication, spatial identifiers (e.g. realm, province, ecoregion) unique site code, information on the disturbance type and timing, the pre-and post-disturbance coral cover, the 5-year annual recovery rate, the recovery shape and recovery completeness classifications. Please see details Methods in the journal article "Coral reef state influences resilience to acute climate-mediated disturbances" as published in Global Ecology and Biogeography.

Large-scale reforestation can potentially bring both benefits and risks to the water cycle, which needs to be better quantified under future climates to inform reforestation decisions. We identified 477 water-insecure basins worldwide accounting for 44.6% (380.2 Mha) of the global reforestation potential. As many of these basins are in the Asia-Pacific, we used regional coupled land-climate modelling for the period 2041–2070 to reveal that reforestation increases evapotranspiration and precipitation for most water-insecure regions over the Asia-Pacific. This resulted in a statistically significant increase in water yield (p < 0.05) for the Loess Plateau-North China Plain, Yangtze Plain, Southeast China and Irrawaddy regions. Precipitation feedback was influenced by the degree of initial moisture limitation affecting soil moisture response and thus evapotranspiration, as well as precipitation advection from other reforested regions and moisture transport away from the local region. Reforestation also reduces the probability of extremely dry months in most of the water-insecure regions. However, some regions experience non-significant declines in net water yield due to heightened evapotranspiration outstripping increases in precipitation, or declines in soil moisture and advected precipitation. This dataset contains raw data outputs for Teo et al. (2022), Global Change Biology. Please see the published paper for further details on methods. For enquiries, please contact the corresponding authors: hcteo [at] u.nus.edu or lianpinkoh [at] nus.edu.sg.  Shapefiles can be opened with any GIS program such as ArcMap or QGIS. CSV files can be opened with any spreadsheet program such as Microsoft Excel or OpenOffice.

Siderophores are low molecular weight secondary metabolites produced by microorganisms under low iron stress as a specific iron chelator. In the present study, a rhizospheric bacterium was isolated from the rhizosphere of sesame plants from Salem district, Tamil Nadu, India and later identified as Bacillus subtilis LSBS2. It exhibited multiple plant-growth-promoting (PGP) traits such as hydrogen cyanide (HCN), ammonia, and indole acetic acid (IAA), and solubilized phosphate. The chrome azurol sulphonate (CAS) agar plate assay was used to screen the siderophore production of LSBS2 and quantitatively the isolate produced 296 mg/L of siderophores in succinic acid medium. Further characterization of the siderophore revealed that the isolate produced catecholate siderophore bacillibactin. A pot culture experiment was used to explore the effect of LSBS2 and its siderophore in promoting iron absorption and plant growth of Sesamum indicum L. Data from the present study revealed that the multifarious Bacillus sp. LSBS2 could be exploited as a potential bioinoculant for growth and yield improvement in S. indicum.

Acidogenic anaerobic fermentation route was explored for the production of bioethanol and volatile fatty acids (VFA) from the press mud (PM) obtained from sugar mill. Slurry was prepared from PM having 10% of total solids and the same was hydrolyzed under acidic thermal conditions. Both press mud slurry (PMS) and pre-treated press mud slurry (PTPMS) was used as feedstock with mixed microbial consortia (MMC) and enriched mixed microbial consortia (EMMC). Mix of bioethanol and VFA were obtained in all the four cases (PMS-MMC, PMS-EMMC, PTPMS-EMC and PTPMS-EMMC), but, bioethanol and VFA yield of 0.04 g/g and 0.27 g/g, respectively obtained from PTPMS with EMMC was found to be comparatively higher. Control experiments carried out with glucose yielded bioethanol and VFA of 0.042 g/g and 0.28 g/g, respectively demonstrating that the organism was using reducible sugars in the feedstock for the generation of bioethanol by simultaneously producing the VFA from COD.

Microalgae offer a great potential to contribute significantly as renewable fuels and documented as a promising platform for algae-based bio refineries. They provide solutions to mitigate the environmental concerns posed by conventional fuel sources; however, the production of microalgal biofuels in large scale production system encounters few technical challenges. High quantity of nutrients requirements and water cost constrain the scaling up microalgal biomass to large scale commercial production. Crop protection against biomass losses due to grazers or pathogens is another stumbling block in microalgal field cultivation. With our existing technologies, unless coupled with high-value or mid-value products, algal biofuel cannot reach the economic target. Many microalgal industries that started targeting biofuel in the last decade had now adopted parallel business plans focusing on algae by-products application as cosmetic supplements, nutraceuticals, oils, natural color, and animal feed. This review provides the current status and proposes a framework for key supply demand, challenges for cost-effective and sustainable use of water and nutrient. Emphasis is placed on the future industrial market status of value added by products of microalgal biomass. The cost factor for biorefinery process development needs to be addressed before its potential to be exploited for various value-added products with algal biofuel.

Rapid urbanization combined with high economic growth, industrialization, and changes in socio-economic conditions increase the quantity of municipal solid waste. Cities located in South-Asia are facing serious issues due to waste, with countries like India, Bangladesh, and Pakistan top of the list of bad waste management. The increasing generation of solid waste and also the improper management of waste in Bangladesh leads to environmental degradation. Current waste management practice in Bangladesh is so weak that day by day it is harming the climate and creating a lot of unwanted situations. This research consists of an examination of the current administrative measures and presents another proposition for the executive cycle to decrease ecological contamination. The research study aims to decrease the amount of waste being dumped into municipal sanitary landfill sites & converting the waste into energy which is both financially and environmentally suitable by involving unemployed people in the management system. The results of this study will give an idea of how waste can be utilized as a resource and how this resource can be a capital good as well as how the local level problems can be solved by taking some strategies and making our environment suitable for future generations.

The performance of dual chambered mediator-less microbial fuel cell (MFC) operated under batch mode was evaluated under different operating temperatures, ranging between 20 and 55 °C, with step increase in temperature of 5 °C. Synthetic wastewater with sucrose as carbon source having chemical oxygen demand (COD) of 519–555 mg/L was used in the study. Temperature was a crucial factor in the performance of MFCs for both COD removal and electricity production. The MFC demonstrated highest COD removal efficiency of 84% and power density normalized to the anode surface area of 34.38 mW/m2 at operating temperature of 40 °C. Higher VSS to SS ratio was observed at the operating temperature between 35 and 45 °C. Under different operating temperatures the observed sludge yield was in the range of 0.05 to 0.14 g VSS/g COD removed. The maximum Coulombic and energy efficiencies were obtained at 40 °C, with values of 7.39 and 13.14%, respectively. Internal resistance of the MFC decreased with increase in operating temperature. Maximum internal resistance of 1,150 Ω was observed when the MFC was operated at 20 °C; whereas the minimum internal resistance (552 Ω) was observed at 55 °C.

SummaryThe adaptation of extra short duration (ESD) pigeonpea (Cajanus cajan) genotypes to rainfed environments was studied on Alfisols and Vertisols at the ICRISAT Center between 1987 and 1989. Despite a slightly shorter crop duration, the grain yield of ESD genotypes was twice as large on Alfisols as on Vertisols. On both soil types, the rate of growth and grain yield were better in crops sown on time than in those where sowing was delayed. The population levels necessary to maximize yield varied among genotypes on Alfisols, where the grain yield of several ESD genotypes compared favourably with that of ICPL 87, a standard short duration genotype. However, none of the ESD genotypes yielded more than ICPL 87 on the Vertisols.