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Replication Package: Software Architecture Assessment for Sustainability: A Case Study This repository contains the supplementary material to support the paper published at the International Conference on Software Architecture (ECSA) 2024 titled, "Software Architecture Assessment for Sustainability: A Case Study". This repository can be used to replicate the study and carry out a Software Architecture Evaluation of other software systems.The online version can be browsed on the linked Github Repository

Project: Coupled Model Intercomparison Project Phase 6 (CMIP6) datasets - These data have been generated as part of the internationally-coordinated Coupled Model Intercomparison Project Phase 6 (CMIP6; see also GMD Special Issue: http://www.geosci-model-dev.net/special_issue590.html). The simulation data provides a basis for climate research designed to answer fundamental science questions and serves as resource for authors of the Sixth Assessment Report of the Intergovernmental Panel on Climate Change (IPCC-AR6). CMIP6 is a project coordinated by the Working Group on Coupled Modelling (WGCM) as part of the World Climate Research Programme (WCRP). Phase 6 builds on previous phases executed under the leadership of the Program for Climate Model Diagnosis and Intercomparison (PCMDI) and relies on the Earth System Grid Federation (ESGF) and the Centre for Environmental Data Analysis (CEDA) along with numerous related activities for implementation. The original data is hosted and partially replicated on a federated collection of data nodes, and most of the data relied on by the IPCC is being archived for long-term preservation at the IPCC Data Distribution Centre (IPCC DDC) hosted by the German Climate Computing Center (DKRZ). The project includes simulations from about 120 global climate models and around 45 institutions and organizations worldwide. Summary: These data include the subset used by IPCC AR6 WGI authors of the datasets originally published in ESGF for 'CMIP6.AerChemMIP.HAMMOZ-Consortium.MPI-ESM-1-2-HAM' with the full Data Reference Syntax following the template 'mip_era.activity_id.institution_id.source_id.experiment_id.member_id.table_id.variable_id.grid_label.version'. The MPI-ESM1.2-HAM climate model, released in 2017, includes the following components: aerosol: HAM2.3, atmos: ECHAM6.3 (spectral T63; 192 x 96 longitude/latitude; 47 levels; top level 0.01 hPa), atmosChem: sulfur chemistry (unnamed), land: JSBACH 3.20, ocean: MPIOM1.63 (bipolar GR1.5, approximately 1.5deg; 256 x 220 longitude/latitude; 40 levels; top grid cell 0-12 m), ocnBgchem: HAMOCC6, seaIce: unnamed (thermodynamic (Semtner zero-layer) dynamic (Hibler 79) sea ice model). The model was run by the ETH Zurich, Switzerland; Max Planck Institut fur Meteorologie, Germany; Forschungszentrum Julich, Germany; University of Oxford, UK; Finnish Meteorological Institute, Finland; Leibniz Institute for Tropospheric Research, Germany; Center for Climate Systems Modeling (C2SM) at ETH Zurich, Switzerland (HAMMOZ-Consortium) in native nominal resolutions: aerosol: 250 km, atmos: 250 km, atmosChem: 250 km, land: 250 km, ocean: 250 km, ocnBgchem: 250 km, seaIce: 250 km.

This database includes a large collection of quality-controlled and homogenized historical snow records measured in the 1951-2001 period in the Central and Southern Apennine Mountains (Italy). Such data have been manually digitized from the Hydrological Yearbooks of the Italian National Hydrological and Mareographic Service (hereafter, NHMS), the institution that managed the hydro-meteorological data collection in Italy from 1917 to 2002. More specifically, the rescued dataset includes the monthly observations of three different variables: · The snow cover duration (SCD), which is defined as total number of days in a given month with snow depth on the ground >=1 cm. This variable is available for 110 stations between 288 and 1430 m above the sea level (ASL). · The number of days with snowfall (NDS), which is total number of days in a given month on which the accumulated snowfall (i.e. the amount of fresh snow with respect to the previous observations) is at least 1 cm. This variable is available for 114 stations between 288 and 1430 m ASL. · The height of new snow (HN), which is defined as the monthly amount of fresh snow (expressed in cm). The monthly value is intended as the sum of daily HN data observed in a determined month. This variable is available for 120 stations between 288 and 1750 m ASL. Note that for HN variable, the data availability is restricted to the period 1971-2001. The considered dataset has been subjected to an accurate quality control consisting of several statistical tests: the gross error test, which flags the data that are above or below acceptable physical limits, the consistency test, which involves an inter-variable check, and the tolerance test, which is focused on the outlier detection. In addition, the homogeneity of the rescued time series has been checked using Climatol method (Guijarro, 2018). The latter is based on the Standard Normal Homogeneity Test (Alexandersson, 1986) for the identification of the breaks and on a linear regression approach for the adjustments (Easterling and Peterson, 1995). Climatol has been also employed for the filling of missing values. The database is structured into three different folders (one for each variable). In a determined folder, the user finds two files, one containing the main information regarding the available stations (code, station name, latitude and longitude (in decimal degrees) and altitude ASL (in m)), the other one the monthly time series for the considered variable. Note that the original data sources of this database, the Hydrological Yearbooks of the NHMS, are freely accessible in printed version (i.e. as scanned images in portable document format) through the Italian Institute for Environmental Protection and Research (ISPRA) website (http://www.bio.isprambiente.it/annalipdf). Additional information about the data rescue processing can be found in the preprint “Historical snowfall measurements in the Central and Southern Apennine Mountains: climatology, variability and trend”, open for discussion in The Cryosphere journal (https://doi.org/10.5194/egusphere-2024-1056). References Alexandersson, H.: A homogeneity test applied to precipitation data, J. Climatol., 6, 661–675, 1986. Easterling, D. R. and Peterson, T.C.: A new method for detecting and adjusting for undocumented discontinuities in climatological time series, International Journal Climatol.,15, 369–377, https://doi.org/10.1002/joc.3370150403, 1995. Guijarro, J. A.: Homogenization of climatic series with Climatol, Climatol manual, https://www.climatol.eu/homog_climatolen.pdf (last access: 15 February 2024), 2018.

Project: IPCC Data Distribution Centre : Supplementary data sets for the Sixth Assessment Report - For the Sixth Assessment Report of the IPCC (AR6) input/source and intermediate datasets underlying the AR6 were collected and long-term archived. This project compliments CMIP6 data subset and snapshot analyzed for the WGI AR6. Summary: This data set contains detailed elements the sea level projections associated with the Intergovernmental Panel on Climate Change Sixth Assessment Report. In particular, it contains relative sea level projections that exclude the background term (representing primarily land subsidence or uplift). It includes probability distributions for all the workflows described in AR6 WGI 9.6.3.2. P-boxes derived from these distributions are available in the sister entry 'IPCC-DDC_AR6_Sup_PBox'. These data may be of use for users who want to substitute their own estimates of the background term. Regional projections can also be accessed through the NASA/IPCC Sea Level Projections Tool at https://sealevel.nasa.gov/ipcc-ar6-sea-level-projection-tool. See https://zenodo.org/communities/ipcc-ar6-sea-level-projections for additional related data sets.

Project: Coupled Model Intercomparison Project Phase 6 (CMIP6) datasets - These data have been generated as part of the internationally-coordinated Coupled Model Intercomparison Project Phase 6 (CMIP6; see also GMD Special Issue: http://www.geosci-model-dev.net/special_issue590.html). The simulation data provides a basis for climate research designed to answer fundamental science questions and serves as resource for authors of the Sixth Assessment Report of the Intergovernmental Panel on Climate Change (IPCC-AR6). CMIP6 is a project coordinated by the Working Group on Coupled Modelling (WGCM) as part of the World Climate Research Programme (WCRP). Phase 6 builds on previous phases executed under the leadership of the Program for Climate Model Diagnosis and Intercomparison (PCMDI) and relies on the Earth System Grid Federation (ESGF) and the Centre for Environmental Data Analysis (CEDA) along with numerous related activities for implementation. The original data is hosted and partially replicated on a federated collection of data nodes, and most of the data relied on by the IPCC is being archived for long-term preservation at the IPCC Data Distribution Centre (IPCC DDC) hosted by the German Climate Computing Center (DKRZ). The project includes simulations from about 120 global climate models and around 45 institutions and organizations worldwide. Summary: These data include the subset used by IPCC AR6 WGI authors of the datasets originally published in ESGF for 'CMIP6.CMIP.CMCC.CMCC-CM2-SR5.historical' with the full Data Reference Syntax following the template 'mip_era.activity_id.institution_id.source_id.experiment_id.member_id.table_id.variable_id.grid_label.version'. The CMCC-CM2-SR5 climate model, released in 2016, includes the following components: aerosol: MAM3, atmos: CAM5.3 (1deg; 288 x 192 longitude/latitude; 30 levels; top at ~2 hPa), land: CLM4.5 (BGC mode), ocean: NEMO3.6 (ORCA1 tripolar primarly 1 deg lat/lon with meridional refinement down to 1/3 degree in the tropics; 362 x 292 longitude/latitude; 50 vertical levels; top grid cell 0-1 m), seaIce: CICE4.0. The model was run by the Fondazione Centro Euro-Mediterraneo sui Cambiamenti Climatici, Lecce 73100, Italy (CMCC) in native nominal resolutions: aerosol: 100 km, atmos: 100 km, land: 100 km, ocean: 100 km, seaIce: 100 km.

Figure 1data_Exp 2Figure 1 data: Condition of experimental seedlings in hummocks with contrasting shrub density and tree canopy in Experiment 2: No Trees - Low Shrub biomass (NTLS), No Trees - High Shrub biomass (NTHS), Present Trees - Low Shrub biomass (PTLS) and Present Trees - High shrub biomass (PTHS) during the warmest growing season (2011) and at the end of the experiment (2013). Seedling condition was defined as: healthy (< 50% of the needles turned yellow or brown) or unhealthy (> 50% of the needles turned yellow or brown). Seedlings were 1 month old at plantation time in the July 2010.Table 1_environmental conditions_Exp 1Table 1 data: Environmental conditions and vegetation characteristics in hummocks (circular and bands) and lawns for Experiment 1. Water table depth below surface is an average for the four growing seasons (2010-2013)Table 2_ photosynthesis data_Exp 1Table 2 photosynthesis data: Photosynthesis rates for experimental pine seedlings in hummocks (circular and bands) versus adjacent lawns for Experiment 1.Table 2_seedling responses_Exp 1Table 2 data: Responses of experimental pine seedlings in hummocks (circular and bands) versus adjacent lawns for Experiment 1 after 4 growing seasons. ST: Seeds inserted on top of moss; SB: Seeds inserted below moss; Small seedling (1 month old at plantation time); Large seedling (2 months old at plantation time). Emergence = % of planted seeds emerged after 1 year. Condition = % healthy seedlings. Stem growth corresponds to vertical stem growth for germinating (ST and SB) seedlings and new stem growth for older (small and large) seedlings.Table 3_regression seedling-environment_Exp 1Table 3 data for generalized linear models assessing the responses of experimental pine seedlings in hummocks (circular and bands) and adjacent lawns for Experiment 1 during the whole experimental period (2010-2013). ST: Seedlings from seeds inserted on top of moss; SB: Seedlings from seeds inserted below moss; Small seedling (1 month old at plantation time); Large seedling (2 months old at plantation time). Condition = % healthy seedlings. Growth = stem growth.Table 4_Environmental data_Exp 2Table 4: Environmental conditions in hummocks with contrasting shrub density and tree canopy in Experiment 2: No Trees - Low Shrub biomass (NTLS), No Trees - High Shrub biomass (NTHS), Present Trees - Low Shrub biomass (PTLS) and Present Trees - High shrub biomass (PTHS).Table 4 and Table S5a_seedling performance_Exp 2Table 4: Seedling performance in hummocks with contrasting shrub density and tree canopy in Experiment 2: No Trees - Low Shrub biomass (NTLS), No Trees - High Shrub biomass (NTHS), Present Trees - Low Shrub biomass (PTLS) and Present Trees - High shrub biomass (PTHS). Seedling emergence, condition and survival from seeds inserted below the moss (SB), and from small planted seedlings.Table S3_cox regression (survival analysis)_Exp 1Table S3: Data for Cox survival analysis for experimental pine seedlings in hummocks (circular and bands) versus adjacent lawns during 2010-2013. ST: Seedlings from seeds inserted on top of moss; SB: Seedlings from seeds inserted below moss; Small seedling (1 month old, 10 cm tall at plantation time); Large seedling (2 months old, 30 cm tall at plantation time).Table S4_ regression seedling-environment 2011_Exp 1Table S4: Data for generalized linear models assessing the responses of experimental pine seedlings in hummocks (circular and bands) and adjacent lawns for Experiment 1 in 2011. Small seedling (1 month old, 10 cm tall at plantation time); Large seedling (2 months old, 30 cm tall at plantation time). Condition = % healthy seedlings. Growth = stem growth. Boreal ecosystems are warming roughly twice as fast as the global average, resulting in woody expansion that could further speed up the climate warming. Boreal peatbogs are waterlogged systems that store more than 30% of the global soil carbon. Facilitative effects of shrubs and trees on the establishment of new individuals could increase tree cover with profound consequences for the structure and functioning of boreal peatbogs, carbon sequestration and climate. We conducted two field experiments in boreal peatbogs to assess the mechanisms that explain tree seedling recruitment and to estimate the strength of positive feedbacks between shrubs and trees. We planted seeds and seedlings of Pinus sylvestris in microsites with contrasting water-tables and woody cover and manipulated both shrub canopy and root competition. We monitored seedling emergence, growth and survival for up to four growing seasons and assessed how seedling responses related to abiotic and biotic conditions. We found that tree recruitment is more successful in drier topographical microsites with deeper water-tables. On these hummocks, shrubs have both positive and negative effects on tree seedling establishment. Shrub cover improved tree seedling condition, growth and survival during the warmest growing season. In turn, higher tree basal area correlates positively with soil nutrient availability, shrub biomass and abundance of tree juveniles. Synthesis. Our results suggest that shrubs facilitate tree colonization of peatbogs which further increases shrub growth. These facilitative effects seem to be stronger under warmer conditions suggesting that a higher frequency of warmer and dry summers may lead to stronger positive interactions between shrubs and trees that could eventually facilitate a shift from moss to tree-dominated systems.

Construction of this dataset is described in the peer-reviewed publication: Calcagno, P., Trumpy, E., Gutiérrez-Negrín, L.C., Liotta, D. A collection of 3D geomodels of the Los Humeros and Acoculco geothermal systems (Mexico). Sci Data 9, 280 (2022). https://doi.org/10.1038/s41597-022-01327-0 The geomodel is available in the form of the following files and formats: Metadata sheet description pdf format GeoModeller project format PDF3D format TSurf format VTK format {"references": ["Calcagno, P., Trumpy, E., Guti\u00e9rrez-Negr\u00edn, L.C., Liotta, D. A collection of 3D geomodels of the Los Humeros and Acoculco geothermal systems (Mexico). Sci Data 9, 280 (2022). https://doi.org/10.1038/s41597-022-01327-0"]}

This document contains the Strategic Research Agenda to Innovation on Blue Energy developed in the framework of the PELAGOS project (D.4.2.1). Relying on both the current Research & Innvation guidelines and priorities established at European level for exploitating in the most effective way the potential of Ocean Energy and the knowledge acquired the activities of PELAGOS project at Mediterranean level, this document considers the strategic focus areas related to the most promising Marine Renewables Energy technologies in the Mediterranean area.

Nearly all major glaciers in Greenland have reduced in size over the last two decades. An increase in the amount of ice transported from the Greenland ice sheet to the oceans is predicted following an increase in Arctic air and ocean temperatures. One of the last glaciers with a floating ice shelf and draining a substantial area of the Greenland ice sheet is the Petermann glacier in North West Greenland. With two major calving events in 2010 and 2012 the extent of its floating ice shelf was reduced to only half of that prior to 2010 and since 2016 new fractures indicate a new calving event is predicted to reduce the length of the glacier by ~14 km. Multiple studies have indicated that after the major calving event of 2012 the glacier accelerated and a new increase in the velocity, possibly linked to the next calving event, has already been observed. With every part of the glacier’s ice shelf that is lost the resistive force that holds the glacier back is reduced and the amount of ice drained to the ocean increases. Losing its entire ice shelf could lead to a significant increase in the contribution of the Petermann glacier to global sea level rise as the Petermann fjord extends inlands below sea level for nearly a hundred kilometers. This study uses ice thickness and surface elevation data combined with velocity data from different sources to analyze the current and future stability of the Petermann glacier. Ice thickness and the velocity data is used as input in a fracture model in order to investigate the different contributions of stress, thinning and an increase in the availability of surface water to the depth crevasses can reach. The areas on the glacier that show locations where crevasses penetrate deep into the ice indicate that the glacier is vulnerable to fracturing in those spots. Connected weak spots might indicate further potential for future calving events. The results derived from the thickness data and the subsequent melt rates show that near the grounding line the glacier is experiencing ...

Data files included: 1\) all.pres_global.csv: is a classic plot (on rows) x species (in column) dataset of presences for all alien species recorded at the global scale. These contain the Global Biodiversity Information Facility (GBIF) and European Vegetation Archive (EVA) presences of alien species recorded globally in the global buffer. Columns correspond to: * source: can be either GBIF or EVA, depending on the original dataset from which data are sourced * Longitude\Latitude: two columns to georeference plots, coordinates in geographic WGS 84 * cells: a unique identifier shared among all the datasets to identify the raster cell to which all other columns refer * 93 columns of species names: these columns display 1 if the corresponding alien species have been found in the corresponding cell, and 0 if at least one other alien species has been found in the same cell. In this case, 0 does not correspond to absences but should be interpreted as a table filler * 7 columns for the environmental variables: these represent the environmental variables extracted for the relevant cells in which at least one alien species was observed. Variable names match the original ones, refer to ly.names.def.csv for a more intuitive description 2\) all.pres_regional.csv: is a classic plot (on rows) x species (in column) dataset of presences for all alien species recorded at the local/regional scale, i.e., in Mediterranean Europe. These contain the Global Biodiversity Information Facility (GBIF) and European Vegetation Archive (EVA) presence of alien species in the regional buffer. Columns correspond to: * source: can be either GBIF or EVA, depending on the original dataset from which data are sourced * Longitude\Latitude: two columns to georeference plots, coordinates in geographic WGS 84 * cells: a unique identifier shared among all the datasets to identify the raster cell to which all other columns refer * 93 columns of species names: these columns display 1 if the corresponding alien species have been found in the corresponding cell, and 0 if at least one other alien species has been found in the same cell. In this case, 0 does not correspond to absences but should be interpreted as a table filler * 7 columns for the environmental variables: these represent the environmental variables extracted for the relevant cells in which at least one alien species was observed. Variable names match the original ones, refer to ly.names.def.csv for a more intuitive description 3\) ly.names.def.csv: is a character vector file (just one row) to define intuitive names of the environmental variables. 4\) Global_BKG.csv: represents all background points used to fit the global model. These were used to extract three sets of background points, after weithging by the regional sampling intensity. Columns correspond to: * Longitude\Latitude: two columns to georeference plots, coordinates in geographic WGS 84 * EVA_Nr._plots: the number of sampled EVA plots in the corresponding cell * cells: a unique identifier shared among all the datasets to identify the raster cell to which all other columns refer * GBIF_Nr._plots: the number of sampled GBIF plots in the corresponding cell. The two cell's number (i.e., EVA_Nr._plots and GBIF_Nr._plots) were summed and used to weigh absences (only once for all species) that were then used to randomly extract the three background point samples in the global background * 7 columns for the environmental variables: these represent the environmental variables extracted for the relevant cells in which at least one alien species was observed. Variable names match the original ones, refer to ly.names.def.csv for a more intuitive description 5\) Local_BKG.csv: represents all background points used to fit the local/regional model. These were used to extract three sets of background points, after weithging by the regional sampling intensity. Columns correspond to: * Longitude\Latitude: two columns to georeference plots, coordinates in geographic WGS 84 * EVA_Nr._plots: the number of sampled EVA plots in the corresponding cell * cells: a unique identifier shared among all the datasets to identify the raster cell to which all other columns refer * GBIF_Nr._plots: the number of sampled GBIF plots in the corresponding cell . The two cells (i.e., EVA_Nr._plots and GBIF_Nr._plots) were summed and used to weight absences (only once for all species) that were then used to randomly extract the three background point samples in the local/regional background * 7 columns for the environmental variables: these represent the environmental variables extracted for the relevant cells in which at least one alien species was observed. Variable names match the original ones, refer to ly.names.def.csv for a more intuitive description 6\) myexpl.var30... : by their extended name, represent the environmental variables used to project the model in the current and future environmental conditions of Mediterranean Europe. This is a raster stack and each layer name is defined by the file ly.names.def.csv, which order is matched. 7\) Distance_to_cities: is a raster file that can be uploaded in R using the raster (function), and represents a cellwise distance to the major cities. 8\) Distance_to_coast: is a raster file that can be uploaded in R using the raster (function), and represents a cellwise distance to the European coastline. 9\) Distance_to_ports: is a raster file that can be uploaded in R using the raster (function), and represents a cellwise distance to the major European ports. These are the raw data that can be used to reproduce results of the paper: "Plant invasion in Mediterranean Europe: current invasion hotspots and future scenarios". The Mediterranean Basin has historically been subject to alien plant invasions that threaten its unique biodiversity. This seasonally dry and densely populated region is undergoing severe climatic and socioeconomic changes, and it is unclear whether these changes will worsen or mitigate plant invasions. Predictions are often biased, as species may not be in equilibrium in the invaded environment, depending on their invasion stage and ecological characteristics. To address future predictions uncertainty, we identified invasion hotspots across multiple biased modelling scenarios and ecological characteristics of successful invaders. We selected 92 alien plant species widespread in Mediterranean Europe and compiled data on their distribution in the Mediterranean and worldwide. We combined these data with environmental and propagule pressure variables to model global and regional species niches and map their current and future habitat suitability. We identified invasion hotspots, examined their potential future shifts, and compared the results of different modelling strategies. Finally, we generalised our findings by using linear models to determine the traits and biogeographic features of invaders most likely to benefit from global change. Currently, invasion hotspots are found near ports and coastlines throughout Mediterranean Europe. However, many species occupy only a small portion of the environmental conditions to which they are preadapted, suggesting that their invasion is still an ongoing process. Future conditions will lead to declines in many currently widespread aliens, which will tend to move to higher elevations and latitudes. Our trait models indicate that future climates will generally favour species with conservative ecological strategies that can cope with reduced water availability, such as those with short stature and low specific leaf area. Taken together, our results suggest that in future environments, these conservative aliens will move farther from the introduction areas and upslope, threatening mountain ecosystems that have been spared from invasions so far. With these data (environmental variables, species presences and background points, and distance to ports cities and to the coast) and using the R software following the ODMAP protocol attached to the original paper all results meet the criteria of reproducible science. Datasets from the EVA and GBIF were processed following the Material and Methods section of the paper, to derive the attached files of regional and global presences and background points. The environmental variables used were processed as explained in the paper. Files of distances to the cities, ports and coast were elaborated from the raw data downloadable as reported in the data availability statement. The data is in .csv format and can be read by any text editor file. We recommend their usage in R. To reproduce analyses please use Biomod 2 R package.