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  • 15. Life on land
  • 14. Life underwater
  • Digital.CSIC

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    Authors: Beguería, Santiago; Vicente Serrano, Sergio M.; Reig-Gracia, Fergus; Latorre Garcés, Borja;

    The Global 0.5° gridded SPEI dataset is made available under the Open Database License. Any rights in individual contents of the database are licensed under the Database Contents License. Users of the dataset are free to share, create and adapt under the conditions of attribution and share-alike. The Global SPEI database, SPEIbase, offers long-time, robust information on the drought conditions at the global scale, with a 0.5 degrees spatial resolution and a monthly time resolution. It has a multi-scale character, providing SPEI time-scales between 1 and 48 months. The Standardized Precipitatin-Evapotranspiration Index (SPEI) expresses, as a standardized variate (mean zero and unit variance), the deviations of the current climatic balance (precipitation minus evapotranspiration potential) with respect to the long-term balance. The reference period for the calculation, in the SPEIbase, corresponds to the whole study period. Being a standardized variate means that the SPEI condition can be compared across space and time. Calculation of the evapotranspiration potential in SPEIbase is based on the FAO-56 Penman-Monteith method. Data type: float; units: z-values (standard deviations). No land pixels are assigned a value of 1.0x10^30. In some rare cases it was not possible to achieve a good fit to the log-logistic distribution, resulting in a NAN (not a number) value in the database. Dimensions of the dataset: lon = 720; lat = 360; time = 1356. Resolution of the dataset: lon = 0.5º; lat = 0.5º; time = 1 month. Created in R using the SPEI package (http://cran.r-project.org/web/packages/SPEI). Global gridded dataset of the Standardized Precipitation-Evapotranspiration Index (SPEI) at time scales between 1 and 48 months.-- Spatial resolution of 0.5º lat/lon.-- This is an update of the SPEIbase v2.6 (https://digital.csic.es/handle/10261/202305).-- What’s new in version 2.7: 1) Based on the CRU TS 4.05 dataset, spanning the period between January 1901 to December 2020. Using TLMoments::PWM instead of lmomco::pwm.ub for calculating distribution parameters. For more details on the SPEI visit http://sac.csic.es/spei No

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    Digital.CSIC
    Dataset . 2023
    Data sources: Datacite
    Digital.CSIC
    Dataset . 2023
    Data sources: Digital.CSIC
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      Digital.CSIC
      Dataset . 2023
      Data sources: Datacite
      Digital.CSIC
      Dataset . 2023
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    Authors: Bennett, Scott; Marba, Nuria; Vaquer-Sunyer, Raquel; Jordá, Gabriel; +2 Authors

    [Experimental design: thermal performance experiments] All experiments were run in climate-controlled incubation facilities of the Institut Mediterrani d’Estudis Avançats (Mallorca, Spain). Following 48 hrs under ambient (collection site) conditions, samples were transferred to individual experimental aquaria, which consisted of a double layered transparent plastic bag filled with 2 L of filtered seawater (60 μm) (following Savva et al. 2018). 16 experimental bags were suspended within 80L temperature-controlled baths. In total, ten baths were used, one for each experimental temperature treatment. Bath temperatures were initially set to the acclimatization temperature (i.e. in situ temperatures) and were subsequently increased or decreased by 1 °C every 24 hours until the desired experimental temperature was achieved. Experimental temperatures were: 15, 18, 21, 24, 26, 28, 30, 32, 34 and 36°C (Table S2). For each species, four replicate aquarium bags were used for each temperature treatment with three individually marked seagrass shoots or three algal fragments placed into each bag. For P. oceanica, each marked plant was a single shoot including leaves, vertical rhizome and roots. For C. nodosa, each marked individual consisted of a 10 cm fragment of horizontal rhizome containing three vertical shoots. Individually marked seaweeds contained the holdfast, and 4-5 fronds of P. pavonica (0.98 ± 0.06 g FW; mean ± SE) or a standardised 5-8 cm fragment with meristematic tip for C. compressa (3.67 ± 0.1 g FW; mean ± SE). Experimental plants were cleaned of conspicuous epiphytes. Once the targeted temperatures were reached in all of the baths, experiments ran for 14 days for the algal species and 21 days for seagrasses to allow for measurable growth in all species at the end of the experiment. Experiments were conducted inside a temperature-controlled chamber at constant humidity and air temperature (15 °C). Bags were arranged in a 4x4 grid within each bath, enabling four species/population treatments to be run simultaneously. Bags were mixed within each bath so that one replicate bag was in each row and column of the grid, to minimise any potential within bath effects of bag position. Replicate bags were suspended with their surface kept open to allow gas exchange and were illuminated with a 14h light:10h dark photoperiod through fluorescent aquarium growth lamps. The water within the bags were mixed with aquaria pumps. The light intensity within each bag was measured via a photometric bulb sensor (LI-COR) and ranged between 180-258 μmol m-2 s-1. Light intensity was constant between experiments and did not significantly differ between experimental treatments (p > 0.05). The temperature in the baths was controlled and recorded with an IKS-AQUASTAR system, which was connected to heaters and thermometers. The seawater within the bags was renewed every 72 hrs and salinity was monitored daily with an YSI multi-parameter meter. Distilled water was added when necessary to ensure salinity levels remained within the range of 36-39 PSU, typical of the study region. Carbon and Nitrogen concentrations in the leaf tissue were measured at the end of the experiment for triplicates of the 24ºC treatment for each species and location (Fig. S2) at Unidade de Técnicas Instrumentais de Análise (University of Coruña, Spain) with an elemental analyser FlashEA112 (ThermoFinnigan). [Species description and distribution] The species used in this study are all common species throughout the Mediterranean Sea, although differ in their biological traits, evolutionary histories and thermo-geographic affinities (Fig. S1). P. oceanica is endemic to the Mediterranean Sea with the all other Posidonia species found in temperate Australia (Aires et al. 2011). The distribution of P. oceanica is restricted to the Mediterranean, spanning from Gibraltar in the west to Cyprus in the east and north into the Aegean and Adriatic seas (Telesca et al. 2015) (Fig. S1A). C. nodosa distribution extends across the Mediterranean Sea and eastern Atlantic Ocean, where it is found from south west Portugal, down the African coast to Mauritania and west to Macaronesia (Alberto et al. 2008) (Fig. S1B). Congeneric species of C. nodosa are found in tropical waters of the Red Sea and Indo-Pacific, suggesting origins in the region at least prior to the closure of the Suez Isthmus, approximately 10Mya. Like C. nodosa, Cystoseira compressa has a distribution that extends across the Mediterranean and into the eastern Atlantic, where it is found west to Macaronesia and south to northwest Africa (Fig. S1C). The genus Cystoseira has recently been reclassified to include just four species with all congeneric Cystoseira spp. having warm-temperate distributions from the Mediterranean to the eastern Atlantic (Orellana et al. 2019). The distribution of Padina pavonica is conservatively considered to resemble C. nodosa and C. compressa, spanning throughout the Mediterranean and into the eastern Atlantic. We considered the poleward distribution limit of P. pavonica to be the British Isles 50ºN (Herbert et al. 2016). P. pavonica was previously thought to have a global distribution, but molecular analysis of the genus has found no evidence to support this (Silberfeld et al. 2013). Instead it has been suggested that P. pavonica was potentially misclassified outside of the Mediterranean, due to morphological similarity with congeneric species (Silberfeld et al. 2013). Padina is a monophyletic genus with a worldwide distribution from tropical to cold temperate waters (Silberfeld et al. 2013). Most species have a regional distribution, with few confirmed examples of species spanning beyond a single marine realm (sensu Spalding et al. 2007). [Metabolic rates] Net production (NP), gross primary production (GPP) and respiration (R) were measured for all species from the four sites for five different experimental temperatures containing the in-situ temperature during sampling up to a 6ºC warming (see SM Table S3 for details). Individuals of the different species were moved to methacrylate cylinders containing seawater treated with UV radiation to remove bacteria and phytoplankton, in incubation tanks at the 5 selected temperatures. Cylinders were closed using gas-tight lids that prevent gas exchange with the atmosphere, containing an optical dissolved oxygen sensor (ODOS® IKS), with a measuring range from 0-200 % saturation and accuracy at 25ºC of 1% saturation, and magnetic stirrers inserted to ensure mixing along the height of the core. Triplicates were measured for each species and location, along with controls consisting in cylinders filled with the UV-treated seawater, in order to account for any residual production or respiration derived from microorganisms (changes in oxygen in controls was subtracted from treatments). Oxygen was measured continuously and recorded every 15 minutes for 24 hours. Changes in the dissolved oxygen (DO) were assumed to result from the biological metabolic processes and represent NP. During the night, changes in DO are assumed to be driven by R, as in the absence of light, no photosynthetic production can occur. R was calculated from the rate of change in oxygen at night, from half an hour after lights went off to half an hour before light went on (NP in darkness equalled R). NP was calculated from the rate of change in DO, at 15 min intervals, accumulated over each 24 h period. Assuming that daytime R equals that during the night, GPP was estimated as the sum of NP and R. To derive daily metabolic rates, we accumulated individual estimates of GPP, NP, and R resolved at 15 min intervals over each 24 h period during experiments and reported them in mmol O2 m−3 day−1. A detailed description of calculation of metabolic rates can be found at Vaquer-Sunyer et al. (Vaquer-Sunyer et al. 2015). [Thermal distribution and thermal safety margins] We estimated the realised thermal distribution for the four experimental species by downloading occurrence records from the Global Biodiversity Information Facility (GBIF.org (11/03/2020) GBIF Occurrence Download). Occurrence records from GBIF were screened for outliers and distributions were verified from the primary literature (Alberto et al. 2008, Draisma et al. 2010, Ni-Ni-Win et al. 2010, Silberfeld et al. 2013, Telesca et al. 2015, Orellana et al. 2019) and Enrique Ballesteros (pers. comms) (Fig. S1). Mean, 1st and 99th percentiles of daily SST’s were downloaded for each occurrence site for the period between 1981-2019 using the SST products described above (Table S4). Thermal range position of species at each experimental site were standardised by their global distribution using a Range Index (RI; Sagarin & Gaines 2002). Median SST at the experimental collection sites were standardized relative to the thermal range observed across a species realized distribution, using the equation: RI = 2(SM- DM)/DB where SM = the median temperature at the experimental collection site, Dm = the thermal midpoint of the species global thermal distribution and DB = range of median temperatures (ºC) that a species experiences across its distribution. The RI scales from -1 to 1, whereby ‘-1’ represents the cool, leading edge of a species distribution, ‘0’ represents the thermal midpoint of a species distribution and ‘1’ represents the warm, trailing edge of a species distribution (Sagarin & Gaines 2002). Thermal safety margins for each population were calculated as the difference between empirically derived upper thermal limits for each population and the maximum long term habitat temperatures recorded at collection sites. Each population’s thermal safety margin was plotted against its range position to examine patterns in thermal sensitivity across a species distribution. [Growth measurements and statistical analyses] Net growth rate of seagrass shoots was measured using leaf piercing-technique (Short & Duarte 2001). At the beginning of the experiment seagrass shoots were pierced just below the ligule with a syringe needle and shoot growth rate was estimated as the elongation of leaf tissue in between the ligule and the mark position of all leaves in a shoot at the end of the experiment, divided by the experimental duration. Net growth rate of macroalgae individuals was measured as the difference in wet weight at the end of the experiment from the beginning of the experiment divided by the duration of the experiment. Moisture on macroalgae specimens was carefully removed before weighing them. Patterns of growth in response to temperature were examined for each experimental population using a gaussian function: g = ke[-0.5(TMA-μ)2/σ2], where k = amplitude, μ = mean and σ = standard deviation of the curve. Best fit values for each parameter were determined using a non-linear least squares regression using the ‘nlstools’ package (Baty et al. 2015) in R (Team 2020). 95% CI for each of the parameters were calculated using non-parametric bootstrapping of the mean centred residuals. The relationship between growth metrics and the best-fit model was determined by comparing the sum of squared deviations (SS) of the observed data from the model, to the SS of 104 randomly resampled datasets. Growth metrics were considered to display a significant relationship to the best-fit model if the observed SS was smaller than the 5th percentile of randomised SS. Upper thermal limits were defined as the optimal temperature + 2 standard deviations (95th percentile of curve) or where net growth = 0. Samples that had lost all pigment or structural integrity by the end of the experiment were considered dead and any positive growth was treated as zero. Comparative patterns in thermal performance between populations have fundamental implications for a species thermal sensitivity to warming and extreme events. Despite this, within-species variation in thermal performance is seldom measured. Here we compare thermal performance between-species variation within communities, for two species of seagrass (Posidonia oceanica and Cymodocea nodosa) and two species of seaweed (Padina pavonica and Cystoseira compressa). Experimental populations from four locations spanning approximately 75% of each species global distribution and a 6ºC gradient in summer temperatures were exposed to 10 temperature treatments (15ºC to 36ºC), reflecting median, maximum and future temperatures. Experimental thermal performance displayed the greatest variability between species, with optimal temperatures differing by over 10ºC within the same location. Within-species differences in thermal performance were also important for P. oceanica which displayed large thermal safety margins within cool and warm-edge populations and small safety margins within central populations. Our findings suggest patterns of thermal performance in Mediterranean seagrasses and seaweeds retain deep ‘pre-Mediterranean’ evolutionary legacies, suggesting marked differences in sensitivity to warming within and between benthic marine communities. [Sample collection] Sample collections were conducted at two sites, separated by approximately 1 km, within each location. Collections were conducted at the same depth (1-3 m) at each location and were spaced across the reef or meadow to try and minimise relatedness between shoots or fragments. Upon collection, fragments were placed into a mesh bag and transported back to holding tanks in cool, damp, dark conditions (following Bennett et al. 2021). Fragments were kept in aerated holding tanks in the collection sites at ambient seawater temperature and maintained under a 14:10 light-dark cycle until transport back to Mallorca, where experiments were performed. Prior to transport, P. oceanica shoots were clipped to 25 cm length (from meristem to tip), to standardise initial conditions and remove old tissue for transport. For transport back to Mallorca, fragments were packed in layers within cool-boxes. Cool-packs were wrapped in damp tea towels (rinsed in seawater) and placed between layers of samples. Samples from Catalonia, Crete and Cyprus experienced approximately 12hrs of transit time. On arrival at the destination, samples were returned to holding tanks with aerated seawater and a 14:10 light-dark cycle. [Sea temperature measurements and reconstruction] Sea surface temperature data for each collection site were based on daily SST maps with a spatial resolution of 1/4°, obtained from the National Center for Environmental Information (NCEI, https://www.ncdc.noaa.gov/oisst (Reynolds et al. 2007). These maps have been generated through the optimal interpolation of Advanced Very High Resolution Radiometer (AVHRR) data for the period 1981-2019. Underwater temperature loggers (ONSET Hobo pro v2 Data logger) were deployed at each site and recorded hourly temperatures throughout one year. In order to obtain an extended time series of temperature at each collection site, a calibration procedure was performed comparing logger data with sea surface temperature from the nearest point on SST maps. In particular, SST data were linearly fitted to logger data for the common period. Then, the calibration coefficients were applied to the whole SST time series to obtain corrected-SST data and reconstruct daily habitat temperatures from 1981-2019. [Field collections] Thermal tolerance experiments were conducted on two seagrass species (P. oceanica and Cymodocea nodosa) and two brown seaweed species (Cystoseira compressa and P. pavonica) from four locations spanning 8 degrees in latitude and 30 degrees in longitude across the Mediterranean (Fig. 1, Table S1). These four species were chosen as they are dominant foundation species and cosmopolitan across the Mediterranean Sea. Thermal performance experiments from Catalonia and Mallorca were conducted simultaneously in June 2016 for seaweeds (P. pavonica and C. compressa) and in August 2016 for seagrasses (P. oceanica and C. nodosa). Experiments for all four species were conducted in July 2017 for Crete and in September 2017 for Cyprus. Horizon 2020 Framework Programme, Award: 659246; Juan de la Cierva Formacion, Award: FJCI-2016-30728; Spanish Ministry of Economy, Industry and Competitiveness, Award: MedShift, CGL2015-71809-P; Spanish Ministry of Science, Innovation and Universities, Award: SUMAECO, RTI2018-095441-B-C21

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    ZENODO
    Dataset . 2022
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    Data sources: ZENODO
    DRYAD
    Dataset . 2022
    License: CC 0
    Data sources: Datacite
    Digital.CSIC
    Dataset . 2022 . Peer-reviewed
    Data sources: Digital.CSIC
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      ZENODO
      Dataset . 2022
      License: CC 0
      Data sources: ZENODO
      DRYAD
      Dataset . 2022
      License: CC 0
      Data sources: Datacite
      Digital.CSIC
      Dataset . 2022 . Peer-reviewed
      Data sources: Digital.CSIC
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    Authors: Smith, Linnea C; Orgiazzi, Alberto; Eisenhauer, Nico; Cesarz, Simone; +10 Authors

    The aim of this study was to quantify direct and indirect relationships between soil microbial community properties (potential basal respiration, microbial biomass) and abiotic factors (soil, climate) in three major land-cover types. Location: Europe Time period: 2018 Major taxa studied: Microbial community (fungi and bacteria) We collected 881 soil samples from across Europe in the framework of the Land Use/Land Cover Area Frame Survey (LUCAS). We measured potential soil basal respiration at 20ºC and microbial biomass (substrate-induced respiration) using an O2-microcompensation apparatus. Climate and soil data were obtained from previous LUCAS surveys and online databases. Structural equation modeling (SEM) was used to quantify relationships between variables, and equations extracted from SEMs were used to create predictive maps. Fatty acid methyl esters were measured in a subset of samples to distinguish fungal from bacterial biomass. Soil microbial properties in croplands were more heavily affected by climate variables than those in forests. Potential soil basal respiration and microbial biomass were correlated in forests but decoupled in grasslands and croplands, where microbial biomass depended on soil carbon. Forests had a higher ratio of fungi to bacteria than grasslands or croplands. Soil microbial communities in grasslands and croplands are likely carbon-limited in comparison with those in forests, and forests have a higher dominance of fungi indicating differences in microbial community composition. Notably, the often already-degraded soils of croplands could be more vulnerable to climate change than more natural soils. The provided maps show potentially vulnerable areas that should be explicitly accounted for in coming management plans to protect soil carbon and slow the increasing vulnerability of European soils to climate change. [Methods] Soil samples were collected during the 2018 LUCAS soil sampling campaign. Soil chemical and physical properties were measured at the Joint Research Centre in Ispra, Italy (Orgiazzi et al., 2018). Soil microbial respiration and biomass, as well as water content and water holding capacity, were measured in the Eisenhauer lab of the German Centre for Integrative Biodiversity Research. Fungi/Bacteria was measured by fatty acid analysis by Felipe Bastida at CEBAS CSIC. Climate and geographical data were harvested from various databases, which are listed in Appendix 1 (data sources) of the associated paper. For more details on the soil sampling and physical and chemical properties, see: Orgiazzi, A., Ballabio, C., Panagos, P., Jones, A., & Fernández-Ugalde, O. (2018). LUCAS Soil, the largest expandable soil dataset for Europe: a review. European Journal of Soil Science, 69(1), 140-153. https://doi.org/10.1111/ejss.12499 For more details on the measurements of soil microbial respiration and biomass, fatty acids, and water holding capacity, see the supplementary methods of the associated paper (Appendix 2). [Usage Notes] Fatty acid analysis was performed for a subset of 267 samples. Water holding capacity and associated measurements of basal respiration was analyzed in a subset of 100 samples. The samples that were not in these subsets have NA values for the columns associated with these measurements. In order to protect the precise locations of the LUCAS sampling sites, latitude and longitude values could not be given. The approximate location of each sampling site is instead described by the NUTS3 region. If you wish to replicate the structural equation modeling described in the paper, for which latitude is required, please get in touch. A description of each column is available in the associated metadata file. Deutsche Forschungsgemeinschaft, Award: FZT 118-202548816. European Research Council, Award: 694368. European Commission. Directorate-General for the Environment. Direction Générale Opérationnelle Agriculture, Ressources Naturelles et Environnement du Service Public de Wallonie. Eurostat. Peer reviewed

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    ZENODO
    Dataset . 2022
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    Data sources: ZENODO
    DRYAD
    Dataset . 2022
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    Digital.CSIC
    Dataset . 2021
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    Digital.CSIC
    Dataset . 2021 . Peer-reviewed
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      ZENODO
      Dataset . 2022
      License: CC 0
      Data sources: ZENODO
      DRYAD
      Dataset . 2022
      License: CC 0
      Data sources: Datacite
      Digital.CSIC
      Dataset . 2021
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      Digital.CSIC
      Dataset . 2021 . Peer-reviewed
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    Authors: Trullenque Blanco, Víctor; Beguería, Santiago; Vicente Serrano, Sergio M.; Peña-Angulo, Dhais; +1 Authors

    [ES] La base de datos consta de dos archivos en formato .txt con las mallas de anomalías de precipitación (Standardized Precipitation Index) calculadas a 1 y 12 meses sobre el dominio peninsular español, cubriendo el periodo 12/2015_12/2020. Estas han sido calculadas a partir de los datos mensuales de la malla de precipitación MOPREDAScentury (https://doi.org/10.20350/digitalCSIC/15136). Además, se incluye un análisis descriptivo de los 40 episodios de sequía identificados según los criterios de intensidad de la sequía (SPI12 =20 % de la superficie de la malla). Para cada episodio se incluyen las series temporales del SPI01 y SPI12 promedio de toda la malla (expresadas en anomalías); el área de la malla en condiciones de sequía (SPI12 =< -0.84) (expresada en tanto por uno); los mapas integrales del episodio atendiendo a su duración (expresada en número de meses) e intensidad (promedio de las celdas en condiciones de sequía); y los mapas que representan la propagación espacial del episodio. Este registro se corresponde con la versión 1.0.0 del conjunto de datos. La base de datos se distribuye bajo una licencia abierta (Open Data Commons Attribution, ODC-By). [EN] The database consists of two files in .txt format with the precipitation anomaly grids (Standardized Precipitation Index) calculated at 1 and 12 months over the Spanish peninsular domain, covering the period 2015/12_2020/12. These have been calculated from the monthly data of the MOPREDAScentury precipitation grid (https://doi.org/10.20350/digitalCSIC/15136). In addition, a descriptive analysis of the 40 drought episodes identified according to the criteria of drought intensity (SPI12 =20 % of the grid area) is included. For each episode we include the time series of the SPI01 and SPI12 average of the whole grid (expressed in anomalies); the area of the grid under drought conditions (SPI12 =< -0.84) (expressed in percent per one); the integral maps of the episode according to its duration (expressed in number of months) and intensity (average of the cells under drought conditions); and the maps representing the spatial propagation of the episode. This record corresponds to version 1.0.0 of the dataset. The database is distributed under an open license (Open Data Commons Attribution, ODC-By). [ES] Malla SPI01: texto plano. 5219 filas -descontando el encabezado- y 1261 columnas -descontando las coordenadas X e Y-. Malla SPI12: texto plano. 5219 filas -descontando el encabezado- y 1250 columnas -descontando las coordenadas X e Y-. Archivos descriptivos de los episodios: mapas integrales de duración e intensidad, promedios de SPI’1 y SPI12 y mapas de la propagación espacial. [EN] SPI01 grid: plain text. 5219 rows (excluding the header) and 1261 columns (excluding the X and Y coordinates). SPI12 grid: plain text. 5219 rows (excluding the header) and 1250 columns (excluding the X and Y coordinates). Episode descriptive files: duration and intensity integral maps, SPI01 and SPI12 averages, and spatial propagation maps. Project PID2020-116860RB-C22: Extremos térmicos y pluviométricos en la España peninsular 1916-2020), funded by the Spanish Ministry of Science. Open Data Commons Attribution (ODC-By 1.0). Peer reviewed

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    Digital.CSIC
    Dataset . 2023
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    Digital.CSIC
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  • Authors: Beguería, Santiago; Vicente Serrano, Sergio M.;

    The Global SPEI database, SPEIbase, offers long-time, robust information on the drought conditions at the global scale, with a 0.5 degrees spatial resolution and a monthly time resolution. It has a multi-scale character, providing SPEI time-scales between 1 and 48 months. The Standardized Precipitatin-Evapotranspiration Index (SPEI) expresses, as a standardized variate (mean zero and unit variance), the deviations of the current climatic balance (precipitation minus evapotranspiration potential) with respect to the long-term balance. The reference period for the calculation, in the SPEIbase, corresponds to the whole study period. Being a standardized variate means that the SPEI condition can be compared across space and time. Calculation of the evapotranspiration potential in SPEIbase is based on the FAO-56 Penman-Monteith method. Data type: float; units: z-values (standard deviations). No land pixels are assigned a value of 1.0x10^30. In some rare cases it was not possible to achieve a good fit to the log-logistic distribution, resulting in a NAN (not a number) value in the database. Dimensions of the dataset: lon = 720; lat = 360; time = 1356. Resolution of the dataset: lon = 0.5º; lat = 0.5º; time = 1 month. Created in R using the SPEI package (http://cran.r-project.org/web/packages/SPEI). Global gridded dataset of the Standardized Precipitation-Evapotranspiration Index (SPEI) at time scales between 1 and 48 months. Spatial resolution of 0.5º lat/lon. Temporal coverage between January 1901 and December 2011. This is an update of a previous version of SPEIbase v2 (http://hdl.handle.net/10261/48169). What’s new in version 2.2: 1) Data has been extended to the period 1901-2011 (it was 1901-2009 in v 2.0). 2) The FAO grass reference evapotranspiration from the CRU TS3.2 dataset has been used as PET input for the SPEI (http://badc.nerc.ac.uk/browse/badc/cru/data/cru_ts_3.20). Precipitation is also obtained from the same CRU TS3.2 dataset. 3) Unbiased probability weighted moments (ub-pwm) method has been used for fitting the log-Logistic distribution, instead of the sub-optimal plotting-position pwm method used in version 1.0. For more details on the SPEI visit http://sac.csic.es/spei. The Global 0.5° gridded SPEI dataset is made available under the Open Database License. Any rights in individual contents of the database are licensed under the Database Contents License. Users of the dataset are free to share, create and adapt under the conditions of attribution and share-alike. Use of the newest version is recommended. Older versions are still available to allow replicability.

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    Authors: Both, Christiaan; Artemyev, A.V.; Blaauw, Bert; Cowie, Richard J.; +19 Authors

    Advances in the phenology of organisms are often attributed to climate change, but alternatively, may reflect a publication bias towards advances and may be caused by environmental factors unrelated to climate change. Both factors are investigated using the breeding dates of 25 long-term studied populations of Ficedula flycatchers across Europe. Trends in spring temperature varied markedly between study sites, and across populations the advancement of laying date was stronger in areas where the spring temperatures increased more, giving support to the theory that climate change causally affects breeding date advancement.

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    Digital.CSIC
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    Authors: Carmen Herrero; Antonio García-Olivares; Josep Pelegrí;

    16 pages, 7 figures, 1 table The model of Paillard and Parrenin (Earth Planet Sci Lett 227(3-4):263-271, 2004) has been recently optimized for the last eight glacial cycles, leading to two different relaxation models with model-data correlations between 0.8 and 0.9 (García-Olivares and Herrero (Clim Dyn 1-25, 2012b)). These two models are here used to predict the effect of an anthropogenic CO2 pulse on the evolution of atmospheric CO2, global ice volume and Antarctic ice cover during the next 300 kyr. The initial atmospheric CO2 condition is obtained after a critical data analysis that sets 1300 Gt as the most realistic carbon Ultimate Recoverable Resources (URR), with the help of a global compartmental model to determine the carbon transfer function to the atmosphere. The next 20 kyr will have an abnormally high greenhouse effect which, according to the CO2 values, will lengthen the present interglacial by some 25 to 33 kyr. This is because the perturbation of the current interglacial will lead to a delay in the future advance of the ice sheet on the Antarctic shelf, causing that the relative maximum of boreal insolation found 65 kyr after present (AP) will not affect the developing glaciation. Instead, it will be the following insolation peak, about 110 kyr AP, which will find an appropriate climatic state to trigger the next deglaciation. © 2013 Springer Science+Business Media Dordrecht This study has been carried out in the framework of project TIC-MOC (CTM2011-28867), funded by the 2008-2011 Spanish R+D Plan. C. Herrero acknowledges a CSIC JAE-Predoc scholarship co-financed by the European Social Fund (FSE) Peer Reviewed

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    Climatic Change
    Article . 2013 . Peer-reviewed
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    Article . 2014 . Peer-reviewed
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      Climatic Change
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    Authors: Ballesté, Elisenda; CSIC - Unidad de Tecnología Marina (UTM);

    BACT&PLAST-1 campaign will take place in the area is in front of the rivers mouths Llobregat and Besos. The tasks to be carried out consist of carrying out CTD transects and water sampling, obtaining sediment cores by multicorer, and trawling the manta trawl for microplastic fishing. Oceanographic data acquired during the BACT&PLAST-1 Cruise (29GD20210621) on board the Research Vessel García del Cid in 2021.

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    Digital.CSIC
    Dataset . 2021
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    Authors: Davide Cammarano; Davide Cammarano; Matthew P. Reynolds; Fulu Tao; +56 Authors

    Asseng, S. et al. Crop models are essential tools for assessing the threat of climate change to local and global food production1. Present models used to predict wheat grain yield are highly uncertain when simulating how crops respond to temperature2. Here we systematically tested 30 different wheat crop models of the Agricultural Model Intercomparison and Improvement Project against field experiments in which growing season mean temperatures ranged from 15 °C to 32 °C, including experiments with artificial heating. Many models simulated yields well, but were less accurate at higher temperatures. The model ensemble median was consistently more accurate in simulating the crop temperature response than any single model, regardless of the input information used. Extrapolating the model ensemble temperature response indicates that warming is already slowing yield gains at a majority of wheat-growing locations. Global wheat production is estimated to fall by 6% for each °C of further temperature increase and become more variable over space and time. We thank the Agricultural Model Intercomparison and Improvement Project and its leaders C. Rosenzweig from NASA Goddard Institute for Space Studies and Columbia University (USA), J. Jones from University of Florida (USA), J. Hatfield from United States Department of Agriculture (USA) and J. Antle from Oregon State University (USA) for support. We also thank M. Lopez from CIMMYT (Turkey), M. Usman Bashir from University of Agriculture, Faisalabad (Pakistan), S. Soufizadeh from Shahid Beheshti University (Iran), and J. Lorgeou and J-C. Deswarte from ARVALIS—Institut du Végétal (France) for assistance with selecting key locations and quantifying regional crop cultivars, anthesis and maturity dates and R. Raymundo for assistance with GIS. S.A. and D.C. received financial support from the International Food Policy Research Institute (IFPRI). C.S. was funded through USDA National Institute for Food and Agriculture award 32011-68002-30191. C.M. received financial support from the KULUNDA project (01LL0905L) and the FACCE MACSUR project (031A103B) funded through the German Federal Ministry of Education and Research (BMBF). F.E. received support from the FACCE MACSUR project (031A103B) funded through the German Federal Ministry of Education and Research (2812ERA115) and E.E.R. was funded through the German Science Foundation (project EW 119/5-1). M.J. and J.E.O. were funded through the FACCE MACSUR project by the Danish Strategic Research Council. K.C.K. and C.N. were funded by the FACCE MACSUR project through the German Federal Ministry of Food and Agriculture (BMEL). F.T., T.P. and R.P.R. received financial support from FACCE MACSUR project funded through the Finnish Ministry of Agriculture and Forestry (MMM); F.T. was also funded through National Natural Science Foundation of China (No. 41071030). C.B. was funded through the Helmholtz project ‘REKLIM—Regional Climate Change: Causes and Effects’ Topic 9: ‘Climate Change and Air Quality’. M.P.R. and P.D.A. received funding from the CGIAR Research Program on Climate Change, Agriculture, and Food Security (CCAFS). G.O’L. was funded through the Australian Grains Research and Development Corporation and the Department of Environment and Primary Industries Victoria, Australia. R.C.I. was funded by Texas AgriLife Research, Texas A&M University. E.W. and Z.Z. were funded by CSIRO and the Chinese Academy of Sciences (CAS) through the research project ‘Advancing crop yield while reducing the use of water and nitrogen’ and by the CSIRO-MoE PhD Research Program. Peer reviewed

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    Authors: Rodríguez Graña, Víctor Manuel; Soengas Fernández, María del Pilar; Alonso-Villaverde Iglesias, Virginia; Sotelo Pérez, Tamara; +2 Authors

    Due to its biennual life cycle Brassica oleracea is especially exposed to seasonal changes in temperature that could limit its growth and fitness. Thermal stress could limit plant growth, leaf development and photosynthesis. We evaluated the performance of two local populations of B. oleracea: one population of cabbage (B. oleracea capitata group) and one population of kale (B. oleracea acephala group) under limiting low and high temperatures.There were differences between crops and how they responded to high and low temperature stress. Low temperatures especially affect photosynthesis and fresh weight. Stomatal conductance and the leaf water content were dramatically reduced and plants produce smaller and thicker leaves. Under high temperatures there was a reduction of the weight that could be associated to a general impairment of the photosynthetic activity.Although high temperatures significantly reduced the dry weight of seedlings, in general terms, low temperature had a higher impact in B. oleracea physiology than high temperature. Interestingly, our results suggest that the capitata population is less sensitive to changes in air temperature than the acephala population.

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    Authors: Beguería, Santiago; Vicente Serrano, Sergio M.; Reig-Gracia, Fergus; Latorre Garcés, Borja;

    The Global 0.5° gridded SPEI dataset is made available under the Open Database License. Any rights in individual contents of the database are licensed under the Database Contents License. Users of the dataset are free to share, create and adapt under the conditions of attribution and share-alike. The Global SPEI database, SPEIbase, offers long-time, robust information on the drought conditions at the global scale, with a 0.5 degrees spatial resolution and a monthly time resolution. It has a multi-scale character, providing SPEI time-scales between 1 and 48 months. The Standardized Precipitatin-Evapotranspiration Index (SPEI) expresses, as a standardized variate (mean zero and unit variance), the deviations of the current climatic balance (precipitation minus evapotranspiration potential) with respect to the long-term balance. The reference period for the calculation, in the SPEIbase, corresponds to the whole study period. Being a standardized variate means that the SPEI condition can be compared across space and time. Calculation of the evapotranspiration potential in SPEIbase is based on the FAO-56 Penman-Monteith method. Data type: float; units: z-values (standard deviations). No land pixels are assigned a value of 1.0x10^30. In some rare cases it was not possible to achieve a good fit to the log-logistic distribution, resulting in a NAN (not a number) value in the database. Dimensions of the dataset: lon = 720; lat = 360; time = 1356. Resolution of the dataset: lon = 0.5º; lat = 0.5º; time = 1 month. Created in R using the SPEI package (http://cran.r-project.org/web/packages/SPEI). Global gridded dataset of the Standardized Precipitation-Evapotranspiration Index (SPEI) at time scales between 1 and 48 months.-- Spatial resolution of 0.5º lat/lon.-- This is an update of the SPEIbase v2.6 (https://digital.csic.es/handle/10261/202305).-- What’s new in version 2.7: 1) Based on the CRU TS 4.05 dataset, spanning the period between January 1901 to December 2020. Using TLMoments::PWM instead of lmomco::pwm.ub for calculating distribution parameters. For more details on the SPEI visit http://sac.csic.es/spei No

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    Authors: Bennett, Scott; Marba, Nuria; Vaquer-Sunyer, Raquel; Jordá, Gabriel; +2 Authors

    [Experimental design: thermal performance experiments] All experiments were run in climate-controlled incubation facilities of the Institut Mediterrani d’Estudis Avançats (Mallorca, Spain). Following 48 hrs under ambient (collection site) conditions, samples were transferred to individual experimental aquaria, which consisted of a double layered transparent plastic bag filled with 2 L of filtered seawater (60 μm) (following Savva et al. 2018). 16 experimental bags were suspended within 80L temperature-controlled baths. In total, ten baths were used, one for each experimental temperature treatment. Bath temperatures were initially set to the acclimatization temperature (i.e. in situ temperatures) and were subsequently increased or decreased by 1 °C every 24 hours until the desired experimental temperature was achieved. Experimental temperatures were: 15, 18, 21, 24, 26, 28, 30, 32, 34 and 36°C (Table S2). For each species, four replicate aquarium bags were used for each temperature treatment with three individually marked seagrass shoots or three algal fragments placed into each bag. For P. oceanica, each marked plant was a single shoot including leaves, vertical rhizome and roots. For C. nodosa, each marked individual consisted of a 10 cm fragment of horizontal rhizome containing three vertical shoots. Individually marked seaweeds contained the holdfast, and 4-5 fronds of P. pavonica (0.98 ± 0.06 g FW; mean ± SE) or a standardised 5-8 cm fragment with meristematic tip for C. compressa (3.67 ± 0.1 g FW; mean ± SE). Experimental plants were cleaned of conspicuous epiphytes. Once the targeted temperatures were reached in all of the baths, experiments ran for 14 days for the algal species and 21 days for seagrasses to allow for measurable growth in all species at the end of the experiment. Experiments were conducted inside a temperature-controlled chamber at constant humidity and air temperature (15 °C). Bags were arranged in a 4x4 grid within each bath, enabling four species/population treatments to be run simultaneously. Bags were mixed within each bath so that one replicate bag was in each row and column of the grid, to minimise any potential within bath effects of bag position. Replicate bags were suspended with their surface kept open to allow gas exchange and were illuminated with a 14h light:10h dark photoperiod through fluorescent aquarium growth lamps. The water within the bags were mixed with aquaria pumps. The light intensity within each bag was measured via a photometric bulb sensor (LI-COR) and ranged between 180-258 μmol m-2 s-1. Light intensity was constant between experiments and did not significantly differ between experimental treatments (p > 0.05). The temperature in the baths was controlled and recorded with an IKS-AQUASTAR system, which was connected to heaters and thermometers. The seawater within the bags was renewed every 72 hrs and salinity was monitored daily with an YSI multi-parameter meter. Distilled water was added when necessary to ensure salinity levels remained within the range of 36-39 PSU, typical of the study region. Carbon and Nitrogen concentrations in the leaf tissue were measured at the end of the experiment for triplicates of the 24ºC treatment for each species and location (Fig. S2) at Unidade de Técnicas Instrumentais de Análise (University of Coruña, Spain) with an elemental analyser FlashEA112 (ThermoFinnigan). [Species description and distribution] The species used in this study are all common species throughout the Mediterranean Sea, although differ in their biological traits, evolutionary histories and thermo-geographic affinities (Fig. S1). P. oceanica is endemic to the Mediterranean Sea with the all other Posidonia species found in temperate Australia (Aires et al. 2011). The distribution of P. oceanica is restricted to the Mediterranean, spanning from Gibraltar in the west to Cyprus in the east and north into the Aegean and Adriatic seas (Telesca et al. 2015) (Fig. S1A). C. nodosa distribution extends across the Mediterranean Sea and eastern Atlantic Ocean, where it is found from south west Portugal, down the African coast to Mauritania and west to Macaronesia (Alberto et al. 2008) (Fig. S1B). Congeneric species of C. nodosa are found in tropical waters of the Red Sea and Indo-Pacific, suggesting origins in the region at least prior to the closure of the Suez Isthmus, approximately 10Mya. Like C. nodosa, Cystoseira compressa has a distribution that extends across the Mediterranean and into the eastern Atlantic, where it is found west to Macaronesia and south to northwest Africa (Fig. S1C). The genus Cystoseira has recently been reclassified to include just four species with all congeneric Cystoseira spp. having warm-temperate distributions from the Mediterranean to the eastern Atlantic (Orellana et al. 2019). The distribution of Padina pavonica is conservatively considered to resemble C. nodosa and C. compressa, spanning throughout the Mediterranean and into the eastern Atlantic. We considered the poleward distribution limit of P. pavonica to be the British Isles 50ºN (Herbert et al. 2016). P. pavonica was previously thought to have a global distribution, but molecular analysis of the genus has found no evidence to support this (Silberfeld et al. 2013). Instead it has been suggested that P. pavonica was potentially misclassified outside of the Mediterranean, due to morphological similarity with congeneric species (Silberfeld et al. 2013). Padina is a monophyletic genus with a worldwide distribution from tropical to cold temperate waters (Silberfeld et al. 2013). Most species have a regional distribution, with few confirmed examples of species spanning beyond a single marine realm (sensu Spalding et al. 2007). [Metabolic rates] Net production (NP), gross primary production (GPP) and respiration (R) were measured for all species from the four sites for five different experimental temperatures containing the in-situ temperature during sampling up to a 6ºC warming (see SM Table S3 for details). Individuals of the different species were moved to methacrylate cylinders containing seawater treated with UV radiation to remove bacteria and phytoplankton, in incubation tanks at the 5 selected temperatures. Cylinders were closed using gas-tight lids that prevent gas exchange with the atmosphere, containing an optical dissolved oxygen sensor (ODOS® IKS), with a measuring range from 0-200 % saturation and accuracy at 25ºC of 1% saturation, and magnetic stirrers inserted to ensure mixing along the height of the core. Triplicates were measured for each species and location, along with controls consisting in cylinders filled with the UV-treated seawater, in order to account for any residual production or respiration derived from microorganisms (changes in oxygen in controls was subtracted from treatments). Oxygen was measured continuously and recorded every 15 minutes for 24 hours. Changes in the dissolved oxygen (DO) were assumed to result from the biological metabolic processes and represent NP. During the night, changes in DO are assumed to be driven by R, as in the absence of light, no photosynthetic production can occur. R was calculated from the rate of change in oxygen at night, from half an hour after lights went off to half an hour before light went on (NP in darkness equalled R). NP was calculated from the rate of change in DO, at 15 min intervals, accumulated over each 24 h period. Assuming that daytime R equals that during the night, GPP was estimated as the sum of NP and R. To derive daily metabolic rates, we accumulated individual estimates of GPP, NP, and R resolved at 15 min intervals over each 24 h period during experiments and reported them in mmol O2 m−3 day−1. A detailed description of calculation of metabolic rates can be found at Vaquer-Sunyer et al. (Vaquer-Sunyer et al. 2015). [Thermal distribution and thermal safety margins] We estimated the realised thermal distribution for the four experimental species by downloading occurrence records from the Global Biodiversity Information Facility (GBIF.org (11/03/2020) GBIF Occurrence Download). Occurrence records from GBIF were screened for outliers and distributions were verified from the primary literature (Alberto et al. 2008, Draisma et al. 2010, Ni-Ni-Win et al. 2010, Silberfeld et al. 2013, Telesca et al. 2015, Orellana et al. 2019) and Enrique Ballesteros (pers. comms) (Fig. S1). Mean, 1st and 99th percentiles of daily SST’s were downloaded for each occurrence site for the period between 1981-2019 using the SST products described above (Table S4). Thermal range position of species at each experimental site were standardised by their global distribution using a Range Index (RI; Sagarin & Gaines 2002). Median SST at the experimental collection sites were standardized relative to the thermal range observed across a species realized distribution, using the equation: RI = 2(SM- DM)/DB where SM = the median temperature at the experimental collection site, Dm = the thermal midpoint of the species global thermal distribution and DB = range of median temperatures (ºC) that a species experiences across its distribution. The RI scales from -1 to 1, whereby ‘-1’ represents the cool, leading edge of a species distribution, ‘0’ represents the thermal midpoint of a species distribution and ‘1’ represents the warm, trailing edge of a species distribution (Sagarin & Gaines 2002). Thermal safety margins for each population were calculated as the difference between empirically derived upper thermal limits for each population and the maximum long term habitat temperatures recorded at collection sites. Each population’s thermal safety margin was plotted against its range position to examine patterns in thermal sensitivity across a species distribution. [Growth measurements and statistical analyses] Net growth rate of seagrass shoots was measured using leaf piercing-technique (Short & Duarte 2001). At the beginning of the experiment seagrass shoots were pierced just below the ligule with a syringe needle and shoot growth rate was estimated as the elongation of leaf tissue in between the ligule and the mark position of all leaves in a shoot at the end of the experiment, divided by the experimental duration. Net growth rate of macroalgae individuals was measured as the difference in wet weight at the end of the experiment from the beginning of the experiment divided by the duration of the experiment. Moisture on macroalgae specimens was carefully removed before weighing them. Patterns of growth in response to temperature were examined for each experimental population using a gaussian function: g = ke[-0.5(TMA-μ)2/σ2], where k = amplitude, μ = mean and σ = standard deviation of the curve. Best fit values for each parameter were determined using a non-linear least squares regression using the ‘nlstools’ package (Baty et al. 2015) in R (Team 2020). 95% CI for each of the parameters were calculated using non-parametric bootstrapping of the mean centred residuals. The relationship between growth metrics and the best-fit model was determined by comparing the sum of squared deviations (SS) of the observed data from the model, to the SS of 104 randomly resampled datasets. Growth metrics were considered to display a significant relationship to the best-fit model if the observed SS was smaller than the 5th percentile of randomised SS. Upper thermal limits were defined as the optimal temperature + 2 standard deviations (95th percentile of curve) or where net growth = 0. Samples that had lost all pigment or structural integrity by the end of the experiment were considered dead and any positive growth was treated as zero. Comparative patterns in thermal performance between populations have fundamental implications for a species thermal sensitivity to warming and extreme events. Despite this, within-species variation in thermal performance is seldom measured. Here we compare thermal performance between-species variation within communities, for two species of seagrass (Posidonia oceanica and Cymodocea nodosa) and two species of seaweed (Padina pavonica and Cystoseira compressa). Experimental populations from four locations spanning approximately 75% of each species global distribution and a 6ºC gradient in summer temperatures were exposed to 10 temperature treatments (15ºC to 36ºC), reflecting median, maximum and future temperatures. Experimental thermal performance displayed the greatest variability between species, with optimal temperatures differing by over 10ºC within the same location. Within-species differences in thermal performance were also important for P. oceanica which displayed large thermal safety margins within cool and warm-edge populations and small safety margins within central populations. Our findings suggest patterns of thermal performance in Mediterranean seagrasses and seaweeds retain deep ‘pre-Mediterranean’ evolutionary legacies, suggesting marked differences in sensitivity to warming within and between benthic marine communities. [Sample collection] Sample collections were conducted at two sites, separated by approximately 1 km, within each location. Collections were conducted at the same depth (1-3 m) at each location and were spaced across the reef or meadow to try and minimise relatedness between shoots or fragments. Upon collection, fragments were placed into a mesh bag and transported back to holding tanks in cool, damp, dark conditions (following Bennett et al. 2021). Fragments were kept in aerated holding tanks in the collection sites at ambient seawater temperature and maintained under a 14:10 light-dark cycle until transport back to Mallorca, where experiments were performed. Prior to transport, P. oceanica shoots were clipped to 25 cm length (from meristem to tip), to standardise initial conditions and remove old tissue for transport. For transport back to Mallorca, fragments were packed in layers within cool-boxes. Cool-packs were wrapped in damp tea towels (rinsed in seawater) and placed between layers of samples. Samples from Catalonia, Crete and Cyprus experienced approximately 12hrs of transit time. On arrival at the destination, samples were returned to holding tanks with aerated seawater and a 14:10 light-dark cycle. [Sea temperature measurements and reconstruction] Sea surface temperature data for each collection site were based on daily SST maps with a spatial resolution of 1/4°, obtained from the National Center for Environmental Information (NCEI, https://www.ncdc.noaa.gov/oisst (Reynolds et al. 2007). These maps have been generated through the optimal interpolation of Advanced Very High Resolution Radiometer (AVHRR) data for the period 1981-2019. Underwater temperature loggers (ONSET Hobo pro v2 Data logger) were deployed at each site and recorded hourly temperatures throughout one year. In order to obtain an extended time series of temperature at each collection site, a calibration procedure was performed comparing logger data with sea surface temperature from the nearest point on SST maps. In particular, SST data were linearly fitted to logger data for the common period. Then, the calibration coefficients were applied to the whole SST time series to obtain corrected-SST data and reconstruct daily habitat temperatures from 1981-2019. [Field collections] Thermal tolerance experiments were conducted on two seagrass species (P. oceanica and Cymodocea nodosa) and two brown seaweed species (Cystoseira compressa and P. pavonica) from four locations spanning 8 degrees in latitude and 30 degrees in longitude across the Mediterranean (Fig. 1, Table S1). These four species were chosen as they are dominant foundation species and cosmopolitan across the Mediterranean Sea. Thermal performance experiments from Catalonia and Mallorca were conducted simultaneously in June 2016 for seaweeds (P. pavonica and C. compressa) and in August 2016 for seagrasses (P. oceanica and C. nodosa). Experiments for all four species were conducted in July 2017 for Crete and in September 2017 for Cyprus. Horizon 2020 Framework Programme, Award: 659246; Juan de la Cierva Formacion, Award: FJCI-2016-30728; Spanish Ministry of Economy, Industry and Competitiveness, Award: MedShift, CGL2015-71809-P; Spanish Ministry of Science, Innovation and Universities, Award: SUMAECO, RTI2018-095441-B-C21

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      ZENODO
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    Authors: Smith, Linnea C; Orgiazzi, Alberto; Eisenhauer, Nico; Cesarz, Simone; +10 Authors

    The aim of this study was to quantify direct and indirect relationships between soil microbial community properties (potential basal respiration, microbial biomass) and abiotic factors (soil, climate) in three major land-cover types. Location: Europe Time period: 2018 Major taxa studied: Microbial community (fungi and bacteria) We collected 881 soil samples from across Europe in the framework of the Land Use/Land Cover Area Frame Survey (LUCAS). We measured potential soil basal respiration at 20ºC and microbial biomass (substrate-induced respiration) using an O2-microcompensation apparatus. Climate and soil data were obtained from previous LUCAS surveys and online databases. Structural equation modeling (SEM) was used to quantify relationships between variables, and equations extracted from SEMs were used to create predictive maps. Fatty acid methyl esters were measured in a subset of samples to distinguish fungal from bacterial biomass. Soil microbial properties in croplands were more heavily affected by climate variables than those in forests. Potential soil basal respiration and microbial biomass were correlated in forests but decoupled in grasslands and croplands, where microbial biomass depended on soil carbon. Forests had a higher ratio of fungi to bacteria than grasslands or croplands. Soil microbial communities in grasslands and croplands are likely carbon-limited in comparison with those in forests, and forests have a higher dominance of fungi indicating differences in microbial community composition. Notably, the often already-degraded soils of croplands could be more vulnerable to climate change than more natural soils. The provided maps show potentially vulnerable areas that should be explicitly accounted for in coming management plans to protect soil carbon and slow the increasing vulnerability of European soils to climate change. [Methods] Soil samples were collected during the 2018 LUCAS soil sampling campaign. Soil chemical and physical properties were measured at the Joint Research Centre in Ispra, Italy (Orgiazzi et al., 2018). Soil microbial respiration and biomass, as well as water content and water holding capacity, were measured in the Eisenhauer lab of the German Centre for Integrative Biodiversity Research. Fungi/Bacteria was measured by fatty acid analysis by Felipe Bastida at CEBAS CSIC. Climate and geographical data were harvested from various databases, which are listed in Appendix 1 (data sources) of the associated paper. For more details on the soil sampling and physical and chemical properties, see: Orgiazzi, A., Ballabio, C., Panagos, P., Jones, A., & Fernández-Ugalde, O. (2018). LUCAS Soil, the largest expandable soil dataset for Europe: a review. European Journal of Soil Science, 69(1), 140-153. https://doi.org/10.1111/ejss.12499 For more details on the measurements of soil microbial respiration and biomass, fatty acids, and water holding capacity, see the supplementary methods of the associated paper (Appendix 2). [Usage Notes] Fatty acid analysis was performed for a subset of 267 samples. Water holding capacity and associated measurements of basal respiration was analyzed in a subset of 100 samples. The samples that were not in these subsets have NA values for the columns associated with these measurements. In order to protect the precise locations of the LUCAS sampling sites, latitude and longitude values could not be given. The approximate location of each sampling site is instead described by the NUTS3 region. If you wish to replicate the structural equation modeling described in the paper, for which latitude is required, please get in touch. A description of each column is available in the associated metadata file. Deutsche Forschungsgemeinschaft, Award: FZT 118-202548816. European Research Council, Award: 694368. European Commission. Directorate-General for the Environment. Direction Générale Opérationnelle Agriculture, Ressources Naturelles et Environnement du Service Public de Wallonie. Eurostat. Peer reviewed

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    ZENODO
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      ZENODO
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    Authors: Trullenque Blanco, Víctor; Beguería, Santiago; Vicente Serrano, Sergio M.; Peña-Angulo, Dhais; +1 Authors

    [ES] La base de datos consta de dos archivos en formato .txt con las mallas de anomalías de precipitación (Standardized Precipitation Index) calculadas a 1 y 12 meses sobre el dominio peninsular español, cubriendo el periodo 12/2015_12/2020. Estas han sido calculadas a partir de los datos mensuales de la malla de precipitación MOPREDAScentury (https://doi.org/10.20350/digitalCSIC/15136). Además, se incluye un análisis descriptivo de los 40 episodios de sequía identificados según los criterios de intensidad de la sequía (SPI12 =20 % de la superficie de la malla). Para cada episodio se incluyen las series temporales del SPI01 y SPI12 promedio de toda la malla (expresadas en anomalías); el área de la malla en condiciones de sequía (SPI12 =< -0.84) (expresada en tanto por uno); los mapas integrales del episodio atendiendo a su duración (expresada en número de meses) e intensidad (promedio de las celdas en condiciones de sequía); y los mapas que representan la propagación espacial del episodio. Este registro se corresponde con la versión 1.0.0 del conjunto de datos. La base de datos se distribuye bajo una licencia abierta (Open Data Commons Attribution, ODC-By). [EN] The database consists of two files in .txt format with the precipitation anomaly grids (Standardized Precipitation Index) calculated at 1 and 12 months over the Spanish peninsular domain, covering the period 2015/12_2020/12. These have been calculated from the monthly data of the MOPREDAScentury precipitation grid (https://doi.org/10.20350/digitalCSIC/15136). In addition, a descriptive analysis of the 40 drought episodes identified according to the criteria of drought intensity (SPI12 =20 % of the grid area) is included. For each episode we include the time series of the SPI01 and SPI12 average of the whole grid (expressed in anomalies); the area of the grid under drought conditions (SPI12 =< -0.84) (expressed in percent per one); the integral maps of the episode according to its duration (expressed in number of months) and intensity (average of the cells under drought conditions); and the maps representing the spatial propagation of the episode. This record corresponds to version 1.0.0 of the dataset. The database is distributed under an open license (Open Data Commons Attribution, ODC-By). [ES] Malla SPI01: texto plano. 5219 filas -descontando el encabezado- y 1261 columnas -descontando las coordenadas X e Y-. Malla SPI12: texto plano. 5219 filas -descontando el encabezado- y 1250 columnas -descontando las coordenadas X e Y-. Archivos descriptivos de los episodios: mapas integrales de duración e intensidad, promedios de SPI’1 y SPI12 y mapas de la propagación espacial. [EN] SPI01 grid: plain text. 5219 rows (excluding the header) and 1261 columns (excluding the X and Y coordinates). SPI12 grid: plain text. 5219 rows (excluding the header) and 1250 columns (excluding the X and Y coordinates). Episode descriptive files: duration and intensity integral maps, SPI01 and SPI12 averages, and spatial propagation maps. Project PID2020-116860RB-C22: Extremos térmicos y pluviométricos en la España peninsular 1916-2020), funded by the Spanish Ministry of Science. Open Data Commons Attribution (ODC-By 1.0). Peer reviewed

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    Digital.CSIC
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      Digital.CSIC
      Dataset . 2023
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      Digital.CSIC
      Dataset . 2023 . Peer-reviewed
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  • Authors: Beguería, Santiago; Vicente Serrano, Sergio M.;

    The Global SPEI database, SPEIbase, offers long-time, robust information on the drought conditions at the global scale, with a 0.5 degrees spatial resolution and a monthly time resolution. It has a multi-scale character, providing SPEI time-scales between 1 and 48 months. The Standardized Precipitatin-Evapotranspiration Index (SPEI) expresses, as a standardized variate (mean zero and unit variance), the deviations of the current climatic balance (precipitation minus evapotranspiration potential) with respect to the long-term balance. The reference period for the calculation, in the SPEIbase, corresponds to the whole study period. Being a standardized variate means that the SPEI condition can be compared across space and time. Calculation of the evapotranspiration potential in SPEIbase is based on the FAO-56 Penman-Monteith method. Data type: float; units: z-values (standard deviations). No land pixels are assigned a value of 1.0x10^30. In some rare cases it was not possible to achieve a good fit to the log-logistic distribution, resulting in a NAN (not a number) value in the database. Dimensions of the dataset: lon = 720; lat = 360; time = 1356. Resolution of the dataset: lon = 0.5º; lat = 0.5º; time = 1 month. Created in R using the SPEI package (http://cran.r-project.org/web/packages/SPEI). Global gridded dataset of the Standardized Precipitation-Evapotranspiration Index (SPEI) at time scales between 1 and 48 months. Spatial resolution of 0.5º lat/lon. Temporal coverage between January 1901 and December 2011. This is an update of a previous version of SPEIbase v2 (http://hdl.handle.net/10261/48169). What’s new in version 2.2: 1) Data has been extended to the period 1901-2011 (it was 1901-2009 in v 2.0). 2) The FAO grass reference evapotranspiration from the CRU TS3.2 dataset has been used as PET input for the SPEI (http://badc.nerc.ac.uk/browse/badc/cru/data/cru_ts_3.20). Precipitation is also obtained from the same CRU TS3.2 dataset. 3) Unbiased probability weighted moments (ub-pwm) method has been used for fitting the log-Logistic distribution, instead of the sub-optimal plotting-position pwm method used in version 1.0. For more details on the SPEI visit http://sac.csic.es/spei. The Global 0.5° gridded SPEI dataset is made available under the Open Database License. Any rights in individual contents of the database are licensed under the Database Contents License. Users of the dataset are free to share, create and adapt under the conditions of attribution and share-alike. Use of the newest version is recommended. Older versions are still available to allow replicability.

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    Authors: Both, Christiaan; Artemyev, A.V.; Blaauw, Bert; Cowie, Richard J.; +19 Authors

    Advances in the phenology of organisms are often attributed to climate change, but alternatively, may reflect a publication bias towards advances and may be caused by environmental factors unrelated to climate change. Both factors are investigated using the breeding dates of 25 long-term studied populations of Ficedula flycatchers across Europe. Trends in spring temperature varied markedly between study sites, and across populations the advancement of laying date was stronger in areas where the spring temperatures increased more, giving support to the theory that climate change causally affects breeding date advancement.

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    Digital.CSIC
    Article . 2004 . Peer-reviewed
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      Digital.CSIC
      Article . 2004 . Peer-reviewed
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    Authors: Carmen Herrero; Antonio García-Olivares; Josep Pelegrí;

    16 pages, 7 figures, 1 table The model of Paillard and Parrenin (Earth Planet Sci Lett 227(3-4):263-271, 2004) has been recently optimized for the last eight glacial cycles, leading to two different relaxation models with model-data correlations between 0.8 and 0.9 (García-Olivares and Herrero (Clim Dyn 1-25, 2012b)). These two models are here used to predict the effect of an anthropogenic CO2 pulse on the evolution of atmospheric CO2, global ice volume and Antarctic ice cover during the next 300 kyr. The initial atmospheric CO2 condition is obtained after a critical data analysis that sets 1300 Gt as the most realistic carbon Ultimate Recoverable Resources (URR), with the help of a global compartmental model to determine the carbon transfer function to the atmosphere. The next 20 kyr will have an abnormally high greenhouse effect which, according to the CO2 values, will lengthen the present interglacial by some 25 to 33 kyr. This is because the perturbation of the current interglacial will lead to a delay in the future advance of the ice sheet on the Antarctic shelf, causing that the relative maximum of boreal insolation found 65 kyr after present (AP) will not affect the developing glaciation. Instead, it will be the following insolation peak, about 110 kyr AP, which will find an appropriate climatic state to trigger the next deglaciation. © 2013 Springer Science+Business Media Dordrecht This study has been carried out in the framework of project TIC-MOC (CTM2011-28867), funded by the 2008-2011 Spanish R+D Plan. C. Herrero acknowledges a CSIC JAE-Predoc scholarship co-financed by the European Social Fund (FSE) Peer Reviewed

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    Climatic Change
    Article . 2013 . Peer-reviewed
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    Digital.CSIC
    Article . 2014 . Peer-reviewed
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    Digital.CSIC
    Conference object . 2014 . Peer-reviewed
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      Climatic Change
      Article . 2013 . Peer-reviewed
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      Digital.CSIC
      Article . 2014 . Peer-reviewed
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      Digital.CSIC
      Conference object . 2014 . Peer-reviewed
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    Authors: Ballesté, Elisenda; CSIC - Unidad de Tecnología Marina (UTM);

    BACT&PLAST-1 campaign will take place in the area is in front of the rivers mouths Llobregat and Besos. The tasks to be carried out consist of carrying out CTD transects and water sampling, obtaining sediment cores by multicorer, and trawling the manta trawl for microplastic fishing. Oceanographic data acquired during the BACT&PLAST-1 Cruise (29GD20210621) on board the Research Vessel García del Cid in 2021.

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    Digital.CSIC
    Dataset . 2021
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      Digital.CSIC
      Dataset . 2021
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    Authors: Davide Cammarano; Davide Cammarano; Matthew P. Reynolds; Fulu Tao; +56 Authors

    Asseng, S. et al. Crop models are essential tools for assessing the threat of climate change to local and global food production1. Present models used to predict wheat grain yield are highly uncertain when simulating how crops respond to temperature2. Here we systematically tested 30 different wheat crop models of the Agricultural Model Intercomparison and Improvement Project against field experiments in which growing season mean temperatures ranged from 15 °C to 32 °C, including experiments with artificial heating. Many models simulated yields well, but were less accurate at higher temperatures. The model ensemble median was consistently more accurate in simulating the crop temperature response than any single model, regardless of the input information used. Extrapolating the model ensemble temperature response indicates that warming is already slowing yield gains at a majority of wheat-growing locations. Global wheat production is estimated to fall by 6% for each °C of further temperature increase and become more variable over space and time. We thank the Agricultural Model Intercomparison and Improvement Project and its leaders C. Rosenzweig from NASA Goddard Institute for Space Studies and Columbia University (USA), J. Jones from University of Florida (USA), J. Hatfield from United States Department of Agriculture (USA) and J. Antle from Oregon State University (USA) for support. We also thank M. Lopez from CIMMYT (Turkey), M. Usman Bashir from University of Agriculture, Faisalabad (Pakistan), S. Soufizadeh from Shahid Beheshti University (Iran), and J. Lorgeou and J-C. Deswarte from ARVALIS—Institut du Végétal (France) for assistance with selecting key locations and quantifying regional crop cultivars, anthesis and maturity dates and R. Raymundo for assistance with GIS. S.A. and D.C. received financial support from the International Food Policy Research Institute (IFPRI). C.S. was funded through USDA National Institute for Food and Agriculture award 32011-68002-30191. C.M. received financial support from the KULUNDA project (01LL0905L) and the FACCE MACSUR project (031A103B) funded through the German Federal Ministry of Education and Research (BMBF). F.E. received support from the FACCE MACSUR project (031A103B) funded through the German Federal Ministry of Education and Research (2812ERA115) and E.E.R. was funded through the German Science Foundation (project EW 119/5-1). M.J. and J.E.O. were funded through the FACCE MACSUR project by the Danish Strategic Research Council. K.C.K. and C.N. were funded by the FACCE MACSUR project through the German Federal Ministry of Food and Agriculture (BMEL). F.T., T.P. and R.P.R. received financial support from FACCE MACSUR project funded through the Finnish Ministry of Agriculture and Forestry (MMM); F.T. was also funded through National Natural Science Foundation of China (No. 41071030). C.B. was funded through the Helmholtz project ‘REKLIM—Regional Climate Change: Causes and Effects’ Topic 9: ‘Climate Change and Air Quality’. M.P.R. and P.D.A. received funding from the CGIAR Research Program on Climate Change, Agriculture, and Food Security (CCAFS). G.O’L. was funded through the Australian Grains Research and Development Corporation and the Department of Environment and Primary Industries Victoria, Australia. R.C.I. was funded by Texas AgriLife Research, Texas A&M University. E.W. and Z.Z. were funded by CSIRO and the Chinese Academy of Sciences (CAS) through the research project ‘Advancing crop yield while reducing the use of water and nitrogen’ and by the CSIRO-MoE PhD Research Program. Peer reviewed

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    Nature Climate Change
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    Nature Climate Change
    Article . 2014 . Peer-reviewed
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    Digital.CSIC
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      Nature Climate Change
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      Nature Climate Change
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      Digital.CSIC
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    Authors: Rodríguez Graña, Víctor Manuel; Soengas Fernández, María del Pilar; Alonso-Villaverde Iglesias, Virginia; Sotelo Pérez, Tamara; +2 Authors

    Due to its biennual life cycle Brassica oleracea is especially exposed to seasonal changes in temperature that could limit its growth and fitness. Thermal stress could limit plant growth, leaf development and photosynthesis. We evaluated the performance of two local populations of B. oleracea: one population of cabbage (B. oleracea capitata group) and one population of kale (B. oleracea acephala group) under limiting low and high temperatures.There were differences between crops and how they responded to high and low temperature stress. Low temperatures especially affect photosynthesis and fresh weight. Stomatal conductance and the leaf water content were dramatically reduced and plants produce smaller and thicker leaves. Under high temperatures there was a reduction of the weight that could be associated to a general impairment of the photosynthetic activity.Although high temperatures significantly reduced the dry weight of seedlings, in general terms, low temperature had a higher impact in B. oleracea physiology than high temperature. Interestingly, our results suggest that the capitata population is less sensitive to changes in air temperature than the acephala population.

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    BMC Plant Biology
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ BMC Plant Biologyarrow_drop_down
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