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Project: Coupled Model Intercomparison Project Phase 6 (CMIP6) datasets - These data have been generated as part of the internationally-coordinated Coupled Model Intercomparison Project Phase 6 (CMIP6; see also GMD Special Issue: http://www.geosci-model-dev.net/special_issue590.html). The simulation data provides a basis for climate research designed to answer fundamental science questions and serves as resource for authors of the Sixth Assessment Report of the Intergovernmental Panel on Climate Change (IPCC-AR6). CMIP6 is a project coordinated by the Working Group on Coupled Modelling (WGCM) as part of the World Climate Research Programme (WCRP). Phase 6 builds on previous phases executed under the leadership of the Program for Climate Model Diagnosis and Intercomparison (PCMDI) and relies on the Earth System Grid Federation (ESGF) and the Centre for Environmental Data Analysis (CEDA) along with numerous related activities for implementation. The original data is hosted and partially replicated on a federated collection of data nodes, and most of the data relied on by the IPCC is being archived for long-term preservation at the IPCC Data Distribution Centre (IPCC DDC) hosted by the German Climate Computing Center (DKRZ). The project includes simulations from about 120 global climate models and around 45 institutions and organizations worldwide. Summary: These data include the subset used by IPCC AR6 WGI authors of the datasets originally published in ESGF for 'CMIP6.ScenarioMIP.UA.MCM-UA-1-0' with the full Data Reference Syntax following the template 'mip_era.activity_id.institution_id.source_id.experiment_id.member_id.table_id.variable_id.grid_label.version'. The Manabe Climate Model v1.0 - University of Arizona climate model, released in 1991, includes the following components: aerosol: Modifies surface albedoes (Haywood et al. 1997, doi: 10.1175/1520-0442(1997)010<1562:GCMCOT>2.0.CO;2), atmos: R30L14 (3.75 X 2.5 degree (long-lat) configuration; 96 x 80 longitude/latitude; 14 levels; top level 0.015 sigma, 15 mb), land: Standard Manabe bucket hydrology scheme (Manabe 1969, doi: 10.1175/1520-0493(1969)097<0739:CATOC>2.3.CO;2), landIce: Specified location - invariant in time, has high albedo and latent heat capacity, ocean: MOM1.0 (MOM1, 1.875 X 2.5 deg; 192 x 80 longitude/latitude; 18 levels; top grid cell 0-40 m), seaIce: Thermodynamic ice model (free drift dynamics). The model was run by the Department of Geosciences, University of Arizona, Tucson, AZ 85721, USA (UA) in native nominal resolutions: aerosol: 250 km, atmos: 250 km, land: 250 km, landIce: 250 km, ocean: 250 km, seaIce: 250 km.

The database focused in both culture and capture, are susceptible to the impacts of climate change. The data collection to examine the vulnerability, as perceived by snakehead (Channa striata) fish farmers in Vietnam and fishers in Cambodia, to the impacts from climate change. Perceived impacts on various actors in the value chain are identified, as well as adaptation strategies currently being utilized and planned for the future and perception suggested to contribute to assisting snakehead farmers and fishers in adapting and preparing for the impacts of climate change.

Nets are towed obliquely at approx. 1 knot, from the surface to approx. 175 m. Towing time is approx. 20 minutes. Zooplankton (weak swimmers >200µm) are collected using oblique tows of a 1 m**2 net (3m length) with 202µm mesh Nitex netting.

Barnacles are dominant members of marine intertidal communities. Their success depends on firm attachment provided by their proteinaceous adhesive and protection imparted by their calcified shell plates. Little is known about how variations in the environment affect adhesion and shell formation processes in barnacles. Increased levels of atmospheric CO2 have led to a reduction in the pH of ocean waters (i.e., ocean acidification), a trend that is expected to continue into the future. Here, we assessed if a reduction in seawater pH, at levels predicted within the next 200 years, would alter physiology, adhesion, and shell formation in the cosmopolitan barnacle Amphibalanus (=Balanus) amphitrite. Juvenile barnacles, settled on silicone substrates, were exposed to one of three static levels of pHT, 8.01, 7.78, or 7.50, for 13 weeks. We found that barnacles were robust to reduced pH, with no effect of pH on physiological metrics (mortality, tissue mass, and presence of eggs). Likewise, adhesive properties (adhesion strength and adhesive plaque gross morphology) were not affected by reduced pH. Shell formation, however, was affected by seawater pH. Shell mass and base plate area were higher in barnacles exposed to reduced pH; barnacles grown at pHT 8.01 exhibited approximately 30% lower shell mass and 20% smaller base plate area as compared to those at pHT 7.50 or 7.78. Enhanced growth at reduced pH appears to be driven by the increased size of the calcite crystals that comprise the shell. Despite enhanced growth, mechanical properties of the base plate (but not the parietal plates) were compromised at the lowest pH level. Barnacle base plates at pHT 7.50 broke more easily and crack propagation, measured through microhardness testing, was significantly affected by seawater pH. Other shell metrics (plate thickness, relative crystallinity, and atomic disorder) were not affected by seawater pH. Hence, a reduction in pH resulted in larger barnacles but with base plates that would crack more readily. It is yet to be determined if such changes would alter the survival of A. amphitrite in the field, but changes in the abundance of this ecologically dominant species would undoubtedly affect the composition of biofouling communities. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-09-18.

Patterns of movement of marine species can reflect strategies of reproduction and dispersal, species’ interactions, trophodynamics, and susceptibility to change, and thus critically inform how we manage populations and ecosystems. On coral reefs, the density and diversity of metazoan taxa is greatest in dead coral and rubble, which is suggested to fuel food webs from the bottom-up. Yet, biomass and secondary productivity in rubble is predominantly available in some of the smallest individuals, limiting how accessible this energy is to higher trophic levels. We address the bioavailability of motile coral reef cryptofauna based on small-scale patterns of emigration in rubble. We deployed modified RUbble Biodiversity Samplers (RUBS) and emergence traps in a shallow rubble patch at Heron Island, Great Barrier Reef, to detect community-level differences in the directional influx of motile cryptofauna under five habitat accessibility regimes. The mean density (0.13–4.5 ind.cm-3) and biomass (0.14–5.2 mg.cm-3) of cryptofauna were high and varied depending on microhabitat accessibility. Emergent zooplankton represented a distinct community (dominated by the Appendicularia and Calanoida) with the lowest density and biomass, indicating constraints on nocturnal resource availability. Mean cryptofauna density and biomass were greatest when interstitial access within rubble was blocked, driven by the rapid proliferation of small harpacticoid copepods from the rubble surface, leading to trophic simplification. Individuals with high biomass (e.g., decapods, gobies, and echinoderms) were greatest when interstitial access within rubble was unrestricted. Treatments with a closed rubble surface did not differ from those completely open, suggesting that top-down predation does not diminish rubble-derived resources. Our results show that conspecific cues and species’ interactions (e.g., competition and predation) within rubble are most critical in shaping ecological outcomes within the cryptobiome. These findings have implications for prey accessibility through trophic and community size structuring in rubble, which may become increasingly relevant as benthic reef complexity shifts in the Anthropocene. We address the bioavailability of coral reef cryptofauna in rubble based on small-scale patterns of emigration. We adapted the accessibility of Rubble Biodiversity Samplers (RUBS), models used to standardise biodiversity sampling in rubble (Wolfe and Mumby 2020), to explore the local movement patterns of rubble-dwelling fauna, with inference to predation processes within and beyond the cryptobenthos. Five treatments were developed to detect community-level differences in the directional influx of motile cryptofauna under various habitat accessibility regimes. Four of these treatments were developed by modifying accessibility into RUBS (https://www.thingiverse.com/thing:4176644/files) to understand limitations on the directional influx and movement of cryptofauna within coral rubble patches using four treatments; (1) open (completely accessible), (2) interstitial access (top closed), (3) surficial access (sides and bottom closed), and (4) raised (above rubble substratum). The fifth treatment involved a series of emergence plankton traps, designed to target demersal cryptofauna that vertically migrate from within the rubble benthos at night, given emergent zooplankton biomass and diversity are greatest at night. Fieldwork was conducted over several weeks (11th September to 5th October 2021) in a shallow (~3–5 m depth) reef slope site on the southern margin of Heron Island (-23˚26.845’ S, 151˚54.732’ E), Great Barrier Reef, Australia (Fig. 1). All collections were conducted under the Great Barrier Reef Marine Park Authority permit G20/44613.1.

Dataset for the article: How can the forest sector maintain its mitigation potential in a changing climate ? Case studies of boreal and northern temperate forests in eastern Canada.

This dataset contains the data used in the manuscript "Physiological adaptation of the diatom Pseudo-nitzschia delicatissima under copper starvation" accepted for publication in April 2023 in Marine Environmental Research. In the open ocean and particularly in iron (Fe)-limited environment, copper (Cu) deficiency might limit the growth of phytoplankton species. Cu is an essential trace metal used in electron-transfer reactions, such as respiration and photosynthesis, when bound to specific enzymes. Some phytoplankton species, such as the diatom Pseudo-nitzschia spp. can cope with Cu starvation through adaptative strategies. This dataset contains the data collected during the experimental starvation of a strain of the diatom P. delicatissima under laboratory controlled conditions.

The data shared in this package delivers the wildfire ignition probability and spreading capacity of vegetated surfaces in Romania following the method developed by Hysa and Baskaya (2019, https://doi.org/10.1007/s40808-018-0519-9). The model relies on remotely sensed free data that covers the time-lapse between 2015-2020. Geospatial information about sixteen criteria about anthropogenic, hydro-meteorological, geophysical, and fuel properties of Romanian territory are considered here. Raw data regarding each criterion is acquired for free from different online databases. The attribute table of the shared shapefile includes all inventory measurements per each criterion. It consist of 70410 point geometries in total representing 1km2 each, covering all vegetated surfaces of Romania. This data consist of a geospatial points layer (shp file), which deliver both the multi-criteria inventory records and the calculated wildfire ignition probability and wildfire spreading capacity (WIPI/WSCI) of the Romanian vegetated surfaces. The distance between points is 1km. The file consists of 70410 points in total, that overlap with the vegetated surfaces as derived from CORINE Land Cover data of 2018.

This work models a last-mile network design problem for an e-retailer with a capacitated two-echelon distribution structure - typical in e-retail last-mile distribution, catering to a market with a stochastic and dynamic daily customer demand requesting delivery within time-windows. Considering the distribution evnironment, this work formulates last-mile network design problem for this e-retailer as a dynamic-stochastic two capacitated location routing problem with time-windows. In doing so, this work splits the last-mile network design problem into its constituent strategic, tactical, and operational decisions. Here, the strategic decisions undertake long-term planning to develop a distribution structure with appropriate distribution facilities and a suitable delivery fleet to service the expected customer demand in the planning horizon. The tactical decisions pertain to medium-term day-to-day planning of last-mile delivery operations to establish efficient goods flow in this distribution structure to service the daily stochastic customer demand. And finally, operational decisions involve immediate short-term planning to fine-tune this last-mile delivery to service the requests arriving dynamically through the day. Note, the last-mile network design problem formulated as a location routing problem constitutes three subproblems encompassing facility location problem, customer allocation problem, and vehicle routing problem, each of which are NP-hard combinatorial optimization problems. To this end, this work develops an adaptive large neighborhood search meta-heuristic algorithm that searches through the neighborhood by destroying and consequently repairing the solution thereby reconfiguring large portions of the solution with specific operators that are chosen adaptively in each iteration of the algorithm, hence the name adaptive large neighborhood search. Further, considering the stochastic and dynamic nature of the delivery environment, this work develops a Monte-Carlo framework simulating each day in the planning horizon, with each day divided into 1-hr timeslots, and with each time-slot accepting customer requests for service by the end of the day. In particular, the framework assumes the e-retailer will delay route commitments until the last-feasible time-slot to accumulate customer requests and consequently assign them to an uncommitted delivery route. Note, a delivery route is committed once the e-retailer starts loading packages assigned to this delivery route onto the delivery vehicle assigned for this delivery route. At the end of every time-slot then, this framework assumes the e-retailer integrates the new customer requests by inserting these customer nodes into such uncommitted delivery routes in a manner that results in the least increase in distribution cost keeping the customer-distribution facility allocation fixed. Thus, the framework iterates through the time-slots with the e-retailer processing route commitments, accumulating customer requests, and subsequently integrating them into the delivery operations for the day. E-commerce has the potential to make urban goods flow economically viable, environmentally efficient, and socially equitable. However, as e-retailers compete with increasingly consumer-focused services, urban freight witnesses a significant increase in associated distribution costs and negative externalities particularly affecting those living close to logistics clusters. Hence, to remain competitive, e-retailers deploy alternate last-mile distribution strategies. These alternate strategies, such as those that include use of electric delivery trucks for last-mile operations, a fleet of crowdsourced drivers for last-mile delivery, consolidation facilities coupled with light-duty delivery vehicles for a multi-echelon distribution, or collection points for customer pickup, can restore sustainable urban goods flow. Thus, in this study, the authors investigate the opportunities and challenges associated with such alternate last-mile distribution strategies for an e-retailer offering expedited service with rush delivery within strict timeframes. To this end, the authors formulate a last-mile network design (LMND) problem as a dynamic-stochastic two-echelon capacitated location routing problem with time-windows (DS-2E-C-LRP-TW) addressed with an adaptive large neighborhood search (ALNS) metaheuristic.