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  • Energy Research
  • 6. Clean water
  • 14. Life underwater
  • GB
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Gebruk, Anna; Dgebuadze, Polina; Rogozhin, Vladimir; Ermilova, Yulia; +2 Authors

    The dataset comprises full list of species of macrozoobenthos collected from the Pechora Sea (SE Barents Sea). Grab samples were collected from 10 stations in the Pechora Bay from aboard RV Kartesh in 2020-2021. Macrobenthic invertebrates were identified with the maximum level of certainty through optical microscopy using regional taxonomic keys. All taxonomic names were standardised using the World Register of Marine Species (WoRMS). All specimens have been counted and weighted (wet biomass) on Ohaus Adventurer scales with reported accuracy to 0.01 g. Bivalve molluscs and gastropods were weighed in shells. Biomass (g. m-2) and abundance (ind m-2) are used to characterise macrozoobenthos. The sampling and identification work was carried out in collaboration with specialists from Lomonosov Moscow State University Marine Research Center and P.P. Shirshov Institute of Oceanology.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ PANGAEA - Data Publi...arrow_drop_down
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ PANGAEA - Data Publi...arrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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  • Authors: Miller, L.C.; Smeaton, C.; Garbutt, A.; Austin, W.E.N.;

    The dataset comprises of physical and biogeochemical measurements of belowground (root) biomass from across four Scottish saltmarshes. Sites were chosen to represent contrasting habitats types in Scotland, in particular sediment types, vegetation and sea level history. The data provide a quantitative measure of belowground (root) biomass, organic carbon content and belowground (root) carbon. Samples were collected using a wide gauge gouge corer. The samples were processed to determine belowground (root) biomass, the organic carbon was quantified through elemental analysis and these two data sets were combined to calculate the belowground (root) carbon content. The data were collected to help create a detailed picture of saltmarsh carbon storage in surficial soils across Scotland. The work was carried out under the NERC programme - Carbon Storage in Intertidal Environment (C-SIDE), NERC grant reference NE/R010846/1 Soil cores were taken at each sampling location using a wide diameter gouge corer. The location of the sample was recorded using GPS. Prior to analysis the samples were stored at 4 degrees Celsius at the University of St Andrews. Belowground (root) biomass, organic carbon content and belowground (root) carbon data was produced using standard analytical procedures (detailed in the supporting documentation). All laboratory equipment were calibrated in accordance with the laboratory practises at the University of St Andrews. Results were recorded on to lab sheets and transferred into an Excel file. Results were exported as comma separated value (.csv) files for ingestion into the EIDC.

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  • Authors: Fry, E.L.; Hall, A.L.; Savage, J.; Bardgett, R.D.; +3 Authors

    This dataset contains nitrate and ammonium concentrations, nitrification and mineralisation rates, particle size and microbial biomass data from soils taken from an experiment based at Winklebury Hill, UK. The experiment used seeds and plug plants to create different plant communities on the bare chalk on Winklebury Hill and tested the resulting carbon and nutrient cycling rates and compared these to the characteristics of different plant functional groups. The experiment ran from 2013 to 2016 and this dataset contains data from 2013 only. This experiment was part of the Wessex BESS project, a six-year (2011-2017) project aimed at understanding how biodiversity underpins the ecosystem functions and services that landscapes provide. KCl extractable N and potential mineralisation were measured using an autoanalyser, running 5% analytical replicates, recalibration (at 5, 4, 3, 2 and 1 ppm) and blanks every 20 samples. Extracts were adjusted for soil moisture. Standardised protocols were followed in all cases, details of which can be found in the supporting documentation.

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    Authors: da Costa, Antonio Carlos Lola; Galbraith, David; Almeida, Samuel; Portela, Bruno Takeshi Tanaka; +10 Authors

    Featured paper: See Editorial p553

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    New Phytologist
    Article
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    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    New Phytologist
    Article . 2010 . Peer-reviewed
    License: Wiley Online Library User Agreement
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    New Phytologist
    Article . 2010
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Australian National ...arrow_drop_down
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      New Phytologist
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      New Phytologist
      Article . 2010 . Peer-reviewed
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      New Phytologist
      Article . 2010
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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: L. Lytton; R. Butler; R. Lake; S. Ehrenberg; +2 Authors

    Use of a pilot-scale fixed-film bioreactor was investigated for remediation of bromate contamination within groundwater. Bromate reduction with stoichiometric production of bromide was observed, providing supporting evidence for complete reduction of bromate with no production of stable intermediates. Reduction of 87-90% bromate from an influent concentration of 1.1 mg L(-1) was observed with retention times of 40-80 h. Lower retention times led to decreases in bromate reduction capability, with 11.5% removal at a 10 h retention time. Nitrate reduction of 76-99% from a 30.7 mg L(-1) as NO(3)(-) influent was observed at retention times of 10-80 h, although an increase in nitrite production to 2.7 mg L(-1) occurred with a 10 h retention time. Backwashing was not required, with the large plastic packing media able to accommodate biomass accumulation without decreases in operational efficiency. This study has provided proof of concept and demonstrated the potential of biological bromate reduction by fixed-film processes for remediation of a bromate contaminated groundwater source.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao The Science of The T...arrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    The Science of The Total Environment
    Article . 2006 . Peer-reviewed
    License: Elsevier TDM
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao The Science of The T...arrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      The Science of The Total Environment
      Article . 2006 . Peer-reviewed
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Anna S. Frank; Sam Subbey; Melanie Kobras; Harald Gjøsæter;

    ABSTRACTThis paper investigates stability conditions of an empirical predator-prey system using a model that includes a single delay term,τ, in description of the predator dynamics. We derive theoretical conditions onτ, in terms of other model parameters, and determine how changes in these conditions define different stability regimes of the system. We derive optimal model parameters by fitting model to empirical data, using unconstrained optimization. The optimization results are combined with those from the theoretical analysis, to make inference about the empirical system stability.Our results show that Hopf bifurcation occurs in the predatory-prey system whenτexceeds a theoretically derived valueτ* > 0. This value represents the critical time for prey availability in advance of the optimal predator growth period. Set into an ecological context, our findings provide mathematical evidence for validity of the match-mismatch hypothesis, for this particular species.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ University of Bergen...arrow_drop_down
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    https://doi.org/10.1101/2020.0...
    Article . 2020 . Peer-reviewed
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    Journal of Theoretical Biology
    Article . 2021 . Peer-reviewed
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    Journal of Theoretical Biology
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      https://doi.org/10.1101/2020.0...
      Article . 2020 . Peer-reviewed
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      Journal of Theoretical Biology
      Article . 2021 . Peer-reviewed
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    Authors: Isaac Trindade-Santos; Faye Moyes; Anne E. Magurran;

    Overexploitation is recognized as one of the main threats to global biodiversity. Here, we report a widespread change in the functional diversity of fisheries catches from the large marine ecosystems (LMEs) of the world over the past 65 years (1950 to 2014). The spatial and temporal trends of functional diversity exploited from the LMEs were calculated using global reconstructed marine fisheries catch data provided by the Sea Around Us initiative (including subsistence, artisanal, recreational, industrial fisheries, and discards) and functional trait data available in FishBase. Our analyses uncovered a substantial increase in the functional richness of both ray-finned fishes (80% of LMEs) and cartilaginous species (sharks and rays) (75% of LMESs), in line with an increase in the taxonomic richness, extracted from these ecosystems. The functional evenness and functional divergence of these catches have also altered substantially over the time span of this study, with considerable geographic variation in the patterns detected. These trends show that global fisheries are increasingly targeting species that play diverse roles within the marine ecosystem and underline the importance of incorporating functional diversity in ecosystem management.

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    Authors: David A. Carozza; Steve Mackinson; Jeroen Steenbeek; Villy Christensen; +37 Authors

    While the physical dimensions of climate change are now routinely assessed through multimodel intercomparisons, projected impacts on the global ocean ecosystem generally rely on individual models with a specific set of assumptions. To address these single-model limitations, we present standardized ensemble projections from six global marine ecosystem models forced with two Earth system models and four emission scenarios with and without fishing. We derive average biomass trends and associated uncertainties across the marine food web. Without fishing, mean global animal biomass decreased by 5% (±4% SD) under low emissions and 17% (±11% SD) under high emissions by 2100, with an average 5% decline for every 1 °C of warming. Projected biomass declines were primarily driven by increasing temperature and decreasing primary production, and were more pronounced at higher trophic levels, a process known as trophic amplification. Fishing did not substantially alter the effects of climate change. Considerable regional variation featured strong biomass increases at high latitudes and decreases at middle to low latitudes, with good model agreement on the direction of change but variable magnitude. Uncertainties due to variations in marine ecosystem and Earth system models were similar. Ensemble projections performed well compared with empirical data, emphasizing the benefits of multimodel inference to project future outcomes. Our results indicate that global ocean animal biomass consistently declines with climate change, and that these impacts are amplified at higher trophic levels. Next steps for model development include dynamic scenarios of fishing, cumulative human impacts, and the effects of management measures on future ocean biomass trends.

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    Proceedings of the National Academy of Sciences
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    Authors: Boris Sauterey; Ben A. Ward;

    Significance As they grow, die, and sink into the ocean’s interior, oceanic phytoplankton drive the so-called biological carbon pump, one of the main biological processes regulating atmospheric carbon concentrations. The biological carbon pump is, therefore, key to climate regulation. Its efficiency is largely determined by the coupling of marine biology to ocean geochemistry through the C:N:P:Fe stoichiometry of phytoplankton biomass, yet what determines this stoichiometry remains poorly understood. Based on a model of plankton biology, we characterize control mechanisms of the C:N ratio of phytoplankton biomass in the North Atlantic, which explain extensive sets of apparently conflicting observations. These findings could improve the predictive ability of global ocean models regarding climate change and the role of marine biology in its mitigation/aggravation.

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    Proceedings of the National Academy of Sciences
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    Authors: Xiurong Hu; Huazhong Ren; Kevin Tansey; Yitong Zheng; +3 Authors

    La sécheresse agricole est l'un des risques agricoles les plus dommageables dans le monde qui peut entraîner des pertes agricoles importantes et une pénurie d'eau. L'utilisation d'images satellites pour surveiller la sécheresse agricole a fait l'objet d'une attention croissante de la part des chercheurs et a également été appliquée à l'échelle régionale et mondiale. Dans cet article, la température de surface de la terre (LST) et les produits d'éclat du nouveau Sentinel-3A SLSTR (radiomètre de température de surface de la mer et de la terre) lancé par l'Agence spatiale européenne (ESA) sont utilisés pour la première fois pour estimer l'indice de condition de température de la végétation (VTCI), qui à son tour est utilisé pour surveiller la sécheresse agricole dans la plaine de Hetao en Mongolie intérieure, en Chine. Cet article analyse initialement la corrélation entre le LST et l'indice de végétation à différence normalisée (NDVI) en utilisant des séries temporelles MODIS LST et NDVI dans différentes conditions de croissance de la végétation. Les résultats révèlent que VTCI ne peut être utilisé que pendant les saisons chaudes (fin du printemps et période estivale) lorsque des corrélations négatives entre LST et NDVI sont observées. Par conséquent, les images VTCI sont capturées dans la zone d'étude entre juillet et août 2017 à l'aide de Sentinel-3A SLSTR LST et NDVI et sont utilisées pour l'enquête sur la sécheresse. Ces images révèlent que le VTCI moyen des pixels des terres cultivées dans la zone d'étude est passé de 0,4511 le 28 juillet à 0,5229 le 12 août avant de diminuer à 0,4710 le 18 août en raison des précipitations de la première période, indiquant ainsi que VTCI a une réponse opportune aux précipitations. Pendant ce temps, la comparaison croisée des valeurs VTCI de Sentinel-3A SLSTR montre une grande cohérence en termes de distribution spatiale avec celle estimée à partir des produits EOS MODIS. La différence entre ces indices variait de −0,1 à 0,1 pour la plupart des points, en particulier dans la couverture terrestre cultivée. Dans l'ensemble, les résultats appuient l'utilisation des produits LST et NDVI de Sentinel-3A SLSTR dans la surveillance de la sécheresse agricole. La sequía agrícola es uno de los peligros agrícolas más dañinos en todo el mundo que puede provocar importantes pérdidas agrícolas y escasez de agua. El uso de imágenes satelitales para monitorear la sequía agrícola ha recibido cada vez más atención de la investigación y también se ha aplicado a escala regional y mundial. En este documento, la temperatura de la superficie terrestre (LST) y los productos de radiancia del nuevo Sentinel-3A SLSTR (radiómetro de temperatura de la superficie del mar y la tierra) lanzado por la Agencia Espacial Europea (esa) se utilizan por primera vez para estimar el índice de condición de temperatura de la vegetación (VTCI), que a su vez se utiliza para monitorear la sequía agrícola en la llanura de Hetao de Mongolia Interior, China. Este documento analiza inicialmente la correlación entre LST y el índice de vegetación de diferencia normalizada (NDVI) mediante el uso de productos MODIS LST y NDVI de series de tiempo en diferentes condiciones de crecimiento de la vegetación. Los hallazgos revelan que el VTCI solo se puede usar en estaciones cálidas (finales de los períodos de primavera y verano) cuando se observan correlaciones negativas entre LST y NDVI. Por lo tanto, las imágenes de VTCI se capturan en el área de estudio entre julio y agosto de 2017 mediante el uso de Sentinel-3A SLSTR LST y NDVI y se utilizan para la investigación de la sequía. Estas imágenes revelan que el VTCI promedio de los píxeles de tierra cultivada en el área de estudio ha aumentado de 0.4511 el 28 de julio a 0.5229 el 12 de agosto antes de disminuir a 0.4710 el 18 de agosto debido a las precipitaciones en el primer período, lo que indica que el VTCI tiene una respuesta oportuna a las precipitaciones. Mientras tanto, la comparación cruzada de los valores de VTCI de Sentinel-3A SLSTR muestra una alta consistencia en términos de distribución espacial con la estimada de los productos EOS MODIS. La diferencia entre estos índices osciló entre -0,1 y 0,1 para la mayoría de los puntos, especialmente en la cubierta vegetal cultivada. En general, los hallazgos respaldan el uso de los productos LST y NDVI de Sentinel-3A SLSTR en el monitoreo de la sequía agrícola. Agricultural drought is one of most damaging agricultural hazards worldwide that can bring significant agricultural losses and water scarcity. The use of satellite images for monitoring agricultural drought has received increasing research attention and has also been applied at both the regional and global scales. In this paper, the land surface temperature (LST) and radiance products of the new Sentinel-3A SLSTR (sea and land surface temperature radiometer) launched by European Space Agency (ESA) are used for the first time for estimating the vegetation temperature condition index (VTCI), which in turn is used for monitoring agricultural drought in the Hetao Plain of Inner Mongolia, China. This paper initially analyzes the correlation between LST and normalized difference vegetation index (NDVI) by using time series time MODIS LST and NDVI products under different vegetation growth conditions. The findings reveal that VTCI can only be used in warm seasons (late spring and summer periods) when negative correlations between LST and NDVI are observed. Therefore, VTCI images are captured in the study area between July and August 2017 by using Sentinel-3A SLSTR LST and NDVI and are utilized for drought investigation. These images reveal that the average VTCI of the cultivated land pixels in the study area has increased from 0.4511 on July 28 to 0.5229 on August 12 before declining to 0.4710 on August 18 due to the rainfall in the first period, thereby indicating that VTCI has a timely response to rainfall. Meanwhile, cross-comparison of VTCI values from Sentinel-3A SLSTR shows high consistency in terms of spatial distribution with that estimated from EOS MODIS products. The difference between these indices ranged from −0.1 to 0.1 for most points, especially in the cultivated land cover. Overall, the findings support the use of the LST and NDVI products of Sentinel-3A SLSTR in monitoring agricultural drought. يعد الجفاف الزراعي أحد أكثر المخاطر الزراعية ضررًا في جميع أنحاء العالم والذي يمكن أن يؤدي إلى خسائر زراعية كبيرة وندرة المياه. حظي استخدام صور الأقمار الصناعية لرصد الجفاف الزراعي باهتمام بحثي متزايد وتم تطبيقه أيضًا على المستويين الإقليمي والعالمي. في هذه الورقة، يتم استخدام درجة حرارة سطح الأرض (LST) ومنتجات الإشعاع الخاصة بالمقياس الإشعاعي الجديد Sentinel -3A SLSTR (مقياس درجة حرارة سطح البحر والأرض) الذي أطلقته وكالة الفضاء الأوروبية (ESA) لأول مرة لتقدير مؤشر حالة درجة حرارة الغطاء النباتي (VTCI)، والذي يستخدم بدوره لرصد الجفاف الزراعي في سهل هيتاو في منغوليا الداخلية، الصين. تحلل هذه الورقة في البداية العلاقة بين LST ومؤشر الاختلاف الطبيعي للغطاء النباتي (NDVI) باستخدام السلاسل الزمنية لمنتجات MODIS LST و NDVI في ظل ظروف نمو مختلفة للغطاء النباتي. تكشف النتائج أنه لا يمكن استخدام VTCI إلا في المواسم الدافئة (أواخر فصلي الربيع والصيف) عند ملاحظة الارتباطات السلبية بين LST و NDVI. لذلك، يتم التقاط صور VTCI في منطقة الدراسة بين يوليو وأغسطس 2017 باستخدام Sentinel -3A SLSTR LST و NDVI وتستخدم للتحقيق في الجفاف. تكشف هذه الصور أن متوسط VTCI لبكسلات الأراضي المزروعة في منطقة الدراسة قد ارتفع من 0.4511 في 28 يوليو إلى 0.5229 في 12 أغسطس قبل أن ينخفض إلى 0.4710 في 18 أغسطس بسبب هطول الأمطار في الفترة الأولى، مما يشير إلى أن VTCI لديها استجابة في الوقت المناسب لهطول الأمطار. وفي الوقت نفسه، تُظهر المقارنة المتقاطعة لقيم VTCI من Sentinel -3A SLSTR اتساقًا عاليًا من حيث التوزيع المكاني مع تلك المقدرة من منتجات EOS MODIS. تراوح الفرق بين هذه المؤشرات من -0.1 إلى 0.1 لمعظم النقاط، خاصة في الغطاء الأرضي المزروع. بشكل عام، تدعم النتائج استخدام منتجات LST و NDVI من Sentinel -3A SLSTR في مراقبة الجفاف الزراعي.

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    Agricultural and Forest Meteorology
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      Agricultural and Forest Meteorology
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    Authors: Gebruk, Anna; Dgebuadze, Polina; Rogozhin, Vladimir; Ermilova, Yulia; +2 Authors

    The dataset comprises full list of species of macrozoobenthos collected from the Pechora Sea (SE Barents Sea). Grab samples were collected from 10 stations in the Pechora Bay from aboard RV Kartesh in 2020-2021. Macrobenthic invertebrates were identified with the maximum level of certainty through optical microscopy using regional taxonomic keys. All taxonomic names were standardised using the World Register of Marine Species (WoRMS). All specimens have been counted and weighted (wet biomass) on Ohaus Adventurer scales with reported accuracy to 0.01 g. Bivalve molluscs and gastropods were weighed in shells. Biomass (g. m-2) and abundance (ind m-2) are used to characterise macrozoobenthos. The sampling and identification work was carried out in collaboration with specialists from Lomonosov Moscow State University Marine Research Center and P.P. Shirshov Institute of Oceanology.

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  • Authors: Miller, L.C.; Smeaton, C.; Garbutt, A.; Austin, W.E.N.;

    The dataset comprises of physical and biogeochemical measurements of belowground (root) biomass from across four Scottish saltmarshes. Sites were chosen to represent contrasting habitats types in Scotland, in particular sediment types, vegetation and sea level history. The data provide a quantitative measure of belowground (root) biomass, organic carbon content and belowground (root) carbon. Samples were collected using a wide gauge gouge corer. The samples were processed to determine belowground (root) biomass, the organic carbon was quantified through elemental analysis and these two data sets were combined to calculate the belowground (root) carbon content. The data were collected to help create a detailed picture of saltmarsh carbon storage in surficial soils across Scotland. The work was carried out under the NERC programme - Carbon Storage in Intertidal Environment (C-SIDE), NERC grant reference NE/R010846/1 Soil cores were taken at each sampling location using a wide diameter gouge corer. The location of the sample was recorded using GPS. Prior to analysis the samples were stored at 4 degrees Celsius at the University of St Andrews. Belowground (root) biomass, organic carbon content and belowground (root) carbon data was produced using standard analytical procedures (detailed in the supporting documentation). All laboratory equipment were calibrated in accordance with the laboratory practises at the University of St Andrews. Results were recorded on to lab sheets and transferred into an Excel file. Results were exported as comma separated value (.csv) files for ingestion into the EIDC.

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  • Authors: Fry, E.L.; Hall, A.L.; Savage, J.; Bardgett, R.D.; +3 Authors

    This dataset contains nitrate and ammonium concentrations, nitrification and mineralisation rates, particle size and microbial biomass data from soils taken from an experiment based at Winklebury Hill, UK. The experiment used seeds and plug plants to create different plant communities on the bare chalk on Winklebury Hill and tested the resulting carbon and nutrient cycling rates and compared these to the characteristics of different plant functional groups. The experiment ran from 2013 to 2016 and this dataset contains data from 2013 only. This experiment was part of the Wessex BESS project, a six-year (2011-2017) project aimed at understanding how biodiversity underpins the ecosystem functions and services that landscapes provide. KCl extractable N and potential mineralisation were measured using an autoanalyser, running 5% analytical replicates, recalibration (at 5, 4, 3, 2 and 1 ppm) and blanks every 20 samples. Extracts were adjusted for soil moisture. Standardised protocols were followed in all cases, details of which can be found in the supporting documentation.

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    Authors: da Costa, Antonio Carlos Lola; Galbraith, David; Almeida, Samuel; Portela, Bruno Takeshi Tanaka; +10 Authors

    Featured paper: See Editorial p553

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    Authors: L. Lytton; R. Butler; R. Lake; S. Ehrenberg; +2 Authors

    Use of a pilot-scale fixed-film bioreactor was investigated for remediation of bromate contamination within groundwater. Bromate reduction with stoichiometric production of bromide was observed, providing supporting evidence for complete reduction of bromate with no production of stable intermediates. Reduction of 87-90% bromate from an influent concentration of 1.1 mg L(-1) was observed with retention times of 40-80 h. Lower retention times led to decreases in bromate reduction capability, with 11.5% removal at a 10 h retention time. Nitrate reduction of 76-99% from a 30.7 mg L(-1) as NO(3)(-) influent was observed at retention times of 10-80 h, although an increase in nitrite production to 2.7 mg L(-1) occurred with a 10 h retention time. Backwashing was not required, with the large plastic packing media able to accommodate biomass accumulation without decreases in operational efficiency. This study has provided proof of concept and demonstrated the potential of biological bromate reduction by fixed-film processes for remediation of a bromate contaminated groundwater source.

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    The Science of The Total Environment
    Article . 2006 . Peer-reviewed
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    Authors: Anna S. Frank; Sam Subbey; Melanie Kobras; Harald Gjøsæter;

    ABSTRACTThis paper investigates stability conditions of an empirical predator-prey system using a model that includes a single delay term,τ, in description of the predator dynamics. We derive theoretical conditions onτ, in terms of other model parameters, and determine how changes in these conditions define different stability regimes of the system. We derive optimal model parameters by fitting model to empirical data, using unconstrained optimization. The optimization results are combined with those from the theoretical analysis, to make inference about the empirical system stability.Our results show that Hopf bifurcation occurs in the predatory-prey system whenτexceeds a theoretically derived valueτ* > 0. This value represents the critical time for prey availability in advance of the optimal predator growth period. Set into an ecological context, our findings provide mathematical evidence for validity of the match-mismatch hypothesis, for this particular species.

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    https://doi.org/10.1101/2020.0...
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    Journal of Theoretical Biology
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    Authors: Isaac Trindade-Santos; Faye Moyes; Anne E. Magurran;

    Overexploitation is recognized as one of the main threats to global biodiversity. Here, we report a widespread change in the functional diversity of fisheries catches from the large marine ecosystems (LMEs) of the world over the past 65 years (1950 to 2014). The spatial and temporal trends of functional diversity exploited from the LMEs were calculated using global reconstructed marine fisheries catch data provided by the Sea Around Us initiative (including subsistence, artisanal, recreational, industrial fisheries, and discards) and functional trait data available in FishBase. Our analyses uncovered a substantial increase in the functional richness of both ray-finned fishes (80% of LMEs) and cartilaginous species (sharks and rays) (75% of LMESs), in line with an increase in the taxonomic richness, extracted from these ecosystems. The functional evenness and functional divergence of these catches have also altered substantially over the time span of this study, with considerable geographic variation in the patterns detected. These trends show that global fisheries are increasingly targeting species that play diverse roles within the marine ecosystem and underline the importance of incorporating functional diversity in ecosystem management.

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    Authors: David A. Carozza; Steve Mackinson; Jeroen Steenbeek; Villy Christensen; +37 Authors

    While the physical dimensions of climate change are now routinely assessed through multimodel intercomparisons, projected impacts on the global ocean ecosystem generally rely on individual models with a specific set of assumptions. To address these single-model limitations, we present standardized ensemble projections from six global marine ecosystem models forced with two Earth system models and four emission scenarios with and without fishing. We derive average biomass trends and associated uncertainties across the marine food web. Without fishing, mean global animal biomass decreased by 5% (±4% SD) under low emissions and 17% (±11% SD) under high emissions by 2100, with an average 5% decline for every 1 °C of warming. Projected biomass declines were primarily driven by increasing temperature and decreasing primary production, and were more pronounced at higher trophic levels, a process known as trophic amplification. Fishing did not substantially alter the effects of climate change. Considerable regional variation featured strong biomass increases at high latitudes and decreases at middle to low latitudes, with good model agreement on the direction of change but variable magnitude. Uncertainties due to variations in marine ecosystem and Earth system models were similar. Ensemble projections performed well compared with empirical data, emphasizing the benefits of multimodel inference to project future outcomes. Our results indicate that global ocean animal biomass consistently declines with climate change, and that these impacts are amplified at higher trophic levels. Next steps for model development include dynamic scenarios of fishing, cumulative human impacts, and the effects of management measures on future ocean biomass trends.

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    Proceedings of the National Academy of Sciences
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    Digital.CSIC
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    Authors: Boris Sauterey; Ben A. Ward;

    Significance As they grow, die, and sink into the ocean’s interior, oceanic phytoplankton drive the so-called biological carbon pump, one of the main biological processes regulating atmospheric carbon concentrations. The biological carbon pump is, therefore, key to climate regulation. Its efficiency is largely determined by the coupling of marine biology to ocean geochemistry through the C:N:P:Fe stoichiometry of phytoplankton biomass, yet what determines this stoichiometry remains poorly understood. Based on a model of plankton biology, we characterize control mechanisms of the C:N ratio of phytoplankton biomass in the North Atlantic, which explain extensive sets of apparently conflicting observations. These findings could improve the predictive ability of global ocean models regarding climate change and the role of marine biology in its mitigation/aggravation.

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    Proceedings of the National Academy of Sciences
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    Proceedings of the National Academy of Sciences
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      Proceedings of the National Academy of Sciences
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    Authors: Xiurong Hu; Huazhong Ren; Kevin Tansey; Yitong Zheng; +3 Authors

    La sécheresse agricole est l'un des risques agricoles les plus dommageables dans le monde qui peut entraîner des pertes agricoles importantes et une pénurie d'eau. L'utilisation d'images satellites pour surveiller la sécheresse agricole a fait l'objet d'une attention croissante de la part des chercheurs et a également été appliquée à l'échelle régionale et mondiale. Dans cet article, la température de surface de la terre (LST) et les produits d'éclat du nouveau Sentinel-3A SLSTR (radiomètre de température de surface de la mer et de la terre) lancé par l'Agence spatiale européenne (ESA) sont utilisés pour la première fois pour estimer l'indice de condition de température de la végétation (VTCI), qui à son tour est utilisé pour surveiller la sécheresse agricole dans la plaine de Hetao en Mongolie intérieure, en Chine. Cet article analyse initialement la corrélation entre le LST et l'indice de végétation à différence normalisée (NDVI) en utilisant des séries temporelles MODIS LST et NDVI dans différentes conditions de croissance de la végétation. Les résultats révèlent que VTCI ne peut être utilisé que pendant les saisons chaudes (fin du printemps et période estivale) lorsque des corrélations négatives entre LST et NDVI sont observées. Par conséquent, les images VTCI sont capturées dans la zone d'étude entre juillet et août 2017 à l'aide de Sentinel-3A SLSTR LST et NDVI et sont utilisées pour l'enquête sur la sécheresse. Ces images révèlent que le VTCI moyen des pixels des terres cultivées dans la zone d'étude est passé de 0,4511 le 28 juillet à 0,5229 le 12 août avant de diminuer à 0,4710 le 18 août en raison des précipitations de la première période, indiquant ainsi que VTCI a une réponse opportune aux précipitations. Pendant ce temps, la comparaison croisée des valeurs VTCI de Sentinel-3A SLSTR montre une grande cohérence en termes de distribution spatiale avec celle estimée à partir des produits EOS MODIS. La différence entre ces indices variait de −0,1 à 0,1 pour la plupart des points, en particulier dans la couverture terrestre cultivée. Dans l'ensemble, les résultats appuient l'utilisation des produits LST et NDVI de Sentinel-3A SLSTR dans la surveillance de la sécheresse agricole. La sequía agrícola es uno de los peligros agrícolas más dañinos en todo el mundo que puede provocar importantes pérdidas agrícolas y escasez de agua. El uso de imágenes satelitales para monitorear la sequía agrícola ha recibido cada vez más atención de la investigación y también se ha aplicado a escala regional y mundial. En este documento, la temperatura de la superficie terrestre (LST) y los productos de radiancia del nuevo Sentinel-3A SLSTR (radiómetro de temperatura de la superficie del mar y la tierra) lanzado por la Agencia Espacial Europea (esa) se utilizan por primera vez para estimar el índice de condición de temperatura de la vegetación (VTCI), que a su vez se utiliza para monitorear la sequía agrícola en la llanura de Hetao de Mongolia Interior, China. Este documento analiza inicialmente la correlación entre LST y el índice de vegetación de diferencia normalizada (NDVI) mediante el uso de productos MODIS LST y NDVI de series de tiempo en diferentes condiciones de crecimiento de la vegetación. Los hallazgos revelan que el VTCI solo se puede usar en estaciones cálidas (finales de los períodos de primavera y verano) cuando se observan correlaciones negativas entre LST y NDVI. Por lo tanto, las imágenes de VTCI se capturan en el área de estudio entre julio y agosto de 2017 mediante el uso de Sentinel-3A SLSTR LST y NDVI y se utilizan para la investigación de la sequía. Estas imágenes revelan que el VTCI promedio de los píxeles de tierra cultivada en el área de estudio ha aumentado de 0.4511 el 28 de julio a 0.5229 el 12 de agosto antes de disminuir a 0.4710 el 18 de agosto debido a las precipitaciones en el primer período, lo que indica que el VTCI tiene una respuesta oportuna a las precipitaciones. Mientras tanto, la comparación cruzada de los valores de VTCI de Sentinel-3A SLSTR muestra una alta consistencia en términos de distribución espacial con la estimada de los productos EOS MODIS. La diferencia entre estos índices osciló entre -0,1 y 0,1 para la mayoría de los puntos, especialmente en la cubierta vegetal cultivada. En general, los hallazgos respaldan el uso de los productos LST y NDVI de Sentinel-3A SLSTR en el monitoreo de la sequía agrícola. Agricultural drought is one of most damaging agricultural hazards worldwide that can bring significant agricultural losses and water scarcity. The use of satellite images for monitoring agricultural drought has received increasing research attention and has also been applied at both the regional and global scales. In this paper, the land surface temperature (LST) and radiance products of the new Sentinel-3A SLSTR (sea and land surface temperature radiometer) launched by European Space Agency (ESA) are used for the first time for estimating the vegetation temperature condition index (VTCI), which in turn is used for monitoring agricultural drought in the Hetao Plain of Inner Mongolia, China. This paper initially analyzes the correlation between LST and normalized difference vegetation index (NDVI) by using time series time MODIS LST and NDVI products under different vegetation growth conditions. The findings reveal that VTCI can only be used in warm seasons (late spring and summer periods) when negative correlations between LST and NDVI are observed. Therefore, VTCI images are captured in the study area between July and August 2017 by using Sentinel-3A SLSTR LST and NDVI and are utilized for drought investigation. These images reveal that the average VTCI of the cultivated land pixels in the study area has increased from 0.4511 on July 28 to 0.5229 on August 12 before declining to 0.4710 on August 18 due to the rainfall in the first period, thereby indicating that VTCI has a timely response to rainfall. Meanwhile, cross-comparison of VTCI values from Sentinel-3A SLSTR shows high consistency in terms of spatial distribution with that estimated from EOS MODIS products. The difference between these indices ranged from −0.1 to 0.1 for most points, especially in the cultivated land cover. Overall, the findings support the use of the LST and NDVI products of Sentinel-3A SLSTR in monitoring agricultural drought. يعد الجفاف الزراعي أحد أكثر المخاطر الزراعية ضررًا في جميع أنحاء العالم والذي يمكن أن يؤدي إلى خسائر زراعية كبيرة وندرة المياه. حظي استخدام صور الأقمار الصناعية لرصد الجفاف الزراعي باهتمام بحثي متزايد وتم تطبيقه أيضًا على المستويين الإقليمي والعالمي. في هذه الورقة، يتم استخدام درجة حرارة سطح الأرض (LST) ومنتجات الإشعاع الخاصة بالمقياس الإشعاعي الجديد Sentinel -3A SLSTR (مقياس درجة حرارة سطح البحر والأرض) الذي أطلقته وكالة الفضاء الأوروبية (ESA) لأول مرة لتقدير مؤشر حالة درجة حرارة الغطاء النباتي (VTCI)، والذي يستخدم بدوره لرصد الجفاف الزراعي في سهل هيتاو في منغوليا الداخلية، الصين. تحلل هذه الورقة في البداية العلاقة بين LST ومؤشر الاختلاف الطبيعي للغطاء النباتي (NDVI) باستخدام السلاسل الزمنية لمنتجات MODIS LST و NDVI في ظل ظروف نمو مختلفة للغطاء النباتي. تكشف النتائج أنه لا يمكن استخدام VTCI إلا في المواسم الدافئة (أواخر فصلي الربيع والصيف) عند ملاحظة الارتباطات السلبية بين LST و NDVI. لذلك، يتم التقاط صور VTCI في منطقة الدراسة بين يوليو وأغسطس 2017 باستخدام Sentinel -3A SLSTR LST و NDVI وتستخدم للتحقيق في الجفاف. تكشف هذه الصور أن متوسط VTCI لبكسلات الأراضي المزروعة في منطقة الدراسة قد ارتفع من 0.4511 في 28 يوليو إلى 0.5229 في 12 أغسطس قبل أن ينخفض إلى 0.4710 في 18 أغسطس بسبب هطول الأمطار في الفترة الأولى، مما يشير إلى أن VTCI لديها استجابة في الوقت المناسب لهطول الأمطار. وفي الوقت نفسه، تُظهر المقارنة المتقاطعة لقيم VTCI من Sentinel -3A SLSTR اتساقًا عاليًا من حيث التوزيع المكاني مع تلك المقدرة من منتجات EOS MODIS. تراوح الفرق بين هذه المؤشرات من -0.1 إلى 0.1 لمعظم النقاط، خاصة في الغطاء الأرضي المزروع. بشكل عام، تدعم النتائج استخدام منتجات LST و NDVI من Sentinel -3A SLSTR في مراقبة الجفاف الزراعي.

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    Agricultural and Forest Meteorology
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      Agricultural and Forest Meteorology
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