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The data comprise Climber3alpha+C simulations created by Matthias Hofmann (PIK) as part of the Work Package 2.1 of the COMFORT project as well as the PyFerret scripts (written by Ralf Liebermann and Matthias Hofmann) used for their evaluation. The simulation data consist of snap_*.nc files and history.nc files for ocean, atmosphere and mixed layer depth (hmxl) performed for different idealized scenarios: CONTROL, double and fourfold atmospheric CO2 (CO2X2 and CO2X4), also with additional Greenland freshwater influx (CO2X2_HOSING and CO2X4_HOSING). Furthermore, tracer simulations (CONTROL, CO2X4, CO2X4_HOSING) and simulations with constant scavenging (CO2X4) are also included. The aim was to analyse the simulations regarding climate change-induced changes in marine biogeochemistry and primary production, which will be published under the title "Shutdown of Atlantic overturning circulation could cause persistent increase of primary production in the Pacific" (see Related Work). Simulation data were generated with Climber3alpha+C (Earth system model of intermediate complexity) and evaluated with PyFerret v7.41. CDO was used to aggregate monthly simulation data into annual means.

Anthropogenic structures (e.g. weirs and dams) fragment river networks and restrict the movement of migratory fish. Poor understanding of behavioural response to hydrodynamic cues at structures currently limits the development of effective barrier mitigation measures. This study aimed to assess the effect of flow constriction and associated flow patterns on eel behaviour during downstream migration. In a field experiment, we tracked the movements of 40 tagged adult European eels (Anguilla anguilla) through the forebay of a redundant hydropower intake under two manipulated hydrodynamic treatments. Interrogation of fish trajectories in relation to measured and modelled water velocities provided new insights into behaviour, fundamental for developing passage technologies for this endangered species. Eels rarely followed direct routes through the site. Initially, fish aligned with streamlines near the channel banks and approached the intake semi-passively. A switch to more energetically costly avoidance behaviours occurred on encountering constricted flow, prior to physical contact with structures. Under high water velocity gradients, fish then tended to escape rapidly back upstream, whereas exploratory ‘search’ behaviour was common when acceleration was low. This study highlights the importance of hydrodynamics in informing eel behaviour. This offers potential to develop behavioural guidance, improve fish passage solutions and enhance traditional physical screening. Fish_detections_UL_CHFish positions derived from acoustic telemetry contained within excel file with 5 columns. 'Record' denotes tag detection numbered consecutively in sequence; 'tag_number' denotes the fish identification number; ‘PosX’ denotes fish x coordinate in UTM; ‘PosY’ denotes fish y coordinate in UTM, ‘Treatment’ denotes experimental treatment

Project: IPCC Data Distribution Centre : Supplementary data sets for the Sixth Assessment Report - For the Sixth Assessment Report of the IPCC (AR6) input/source and intermediate datasets underlying the AR6 were collected and long-term archived. This project compliments CMIP6 data subset and snapshot analyzed for the WGI AR6. Summary: This data set contains detailed elements the sea level projections associated with the Intergovernmental Panel on Climate Change Sixth Assessment Report. In particular, it contains relative sea level projections that exclude the background term (representing primarily land subsidence or uplift). It includes probability distributions for all the workflows described in AR6 WGI 9.6.3.2. P-boxes derived from these distributions are available in the sister entry 'IPCC-DDC_AR6_Sup_PBox'. These data may be of use for users who want to substitute their own estimates of the background term. Regional projections can also be accessed through the NASA/IPCC Sea Level Projections Tool at https://sealevel.nasa.gov/ipcc-ar6-sea-level-projection-tool. See https://zenodo.org/communities/ipcc-ar6-sea-level-projections for additional related data sets.

Image dataset used for a colour analysis of coral branches throughout a long-term marine heatwave emulation experiment using machine learning. Article: "Within population variability in coral heat tolerance indicates climate adaptation potential" by Humanes and Lachs et al. Code to analyse the dataset is found at 10.5281/zenodo.6256164. LL received funding from Natural Environment Research Council (NERC) ONE Planet Doctoral Training Partnership (NE/S007512/1).

Upwelling processes bring nutrient-rich waters from the deep ocean to the surface. Areas of upwelling are often associated with high productivity, offering great economic value in terms of fisheries. The sensitivity of spring/summer-time coastal upwelling systems to climate change has recently received a lot of attention. Several studies have suggested that their intensity may increase in the future while other authors have shown decreasing intensity in their equatorward portions. Yet, recent observations do not show robust evidence of this intensification. The Senegalo-Mauritanian upwelling system (SMUS) located at the southern edge of the north Atlantic system (12°N–20°N) and most active in winter/spring has been largely excluded from these studies. Here, the seasonal cycle of the SMUS and its response to climate change is investigated in the database of the Coupled Models Inter comparison Project Phase 5 (CMIP5). Upwelling magnitude and surface signature are characterized by several sea surface temperature and wind stress indices. We highlight the ability of the climate models to reproduce the system, as well as their biases. The simulations suggest that the intensity of the SMUS winter/spring upwelling will moderately decrease in the future, primarily because of a reduction of the wind forcing linked to a northward shift of Azores anticyclone and a more regional modulation of the low pressures found over Northwest Africa. The implications of such an upwelling reduction on the ecosystems and local communities exploiting them remains very uncertain.

Seagrass systems of the Western Pacific region are biodiverse habitats, providing vital services to ecosystems and humans over a vast geographic range. SeagrassNet is a worldwide monitoring program that collects data on seagrass habitats, including the ten locations across the Western Pacific reported here where change at various scales was rapidly detected. Three sites remote from human influence were stable. Seagrasses declined largely due to increased nutrient loading (4 sites) and increased sedimentation (3 sites), the two most common stressors of seagrass worldwide. Two sites experienced near-total loss from of excess sedimentation, followed by partial recovery once sedimentation was reduced. Species shifts were observed at every site with recovering sites colonized by pioneer species. Regulation of watersheds is essential if marine protected areas are to preserve seagrass meadows. Seagrasses in the Western Pacific experience stress due to human impacts despite the vastness of the ocean area and low development pressures.

Integrated multitrophic aquaculture (IMTA) is a versatile technology emerging as an ecological and sustainable solution for traditional monoculture aquacultures in terms of effluent treatment. Nevertheless, IMTA is still poorly applied in aquaculture industry due to, among other reasons, the lack of effective, low-investment and low-maintenance solutions. In this study, one has developed a practical and low maintenance IMTA-pilot system, settled in a semi-intensive coastal aquaculture. The optimisation and performance of the system was validated using Ulva spp., a macroalgae that naturally grows in the fishponds of the local aquaculture. Several cultivation experiments were performed at lab-scale and in the IMTA-pilot system, in static mode. The specific growth rate (SGR), yield, nutrient removal, N and C enrichment, protein and pigment content were monitored. Ulva spp. successfully thrived in effluent from the fish species sea bream (Sparus aurata) and sea bass (Dicentrarchus labrax) production tanks and significantly reduced inorganic nutrient load in the effluent, particularly, NH4+, PO43− and NO3−. The enrichment of nitrogen in Ulva spp.’s tissues indicated nitrogen assimilation by the algae, though, the cultivated Ulva spp. showed lower amounts of protein and pigments in comparison to the wild type. This study indicates that the designed IMTA-pilot system is an efficient solution for fish effluent treatment and Ulva spp., a suitable effluent remediator.

Total oxygen uptake rates were assessed by conducting sediment core incubations. After MUC retrieval and sediment core preparation on deck, three cores were taken to a dark, temperature controlled laboratory on board Polarstern that was refrigerated to 2 °C-4 °C. Incubation procedure generally followed the approach described by Link et al. (2013, https://doi.org/10.5194/bg-10-5911-2013).

Mesocosm experiments have been fundamental to investigate the effects of elevated CO2 and ocean acidification (OA) on planktic communities. However, few of these experiments have been conducted using naturally nutrient-limited waters and/or considering the combined effects of OA and ocean warming (OW). Coccolithophores are a group of calcifying phytoplankton that can reach high abundances in the Mediterranean Sea, and whose responses to OA are modulated by temperature and nutrients. We present the results of the first land-based mesocosm experiment testing the effects of combined OA and OW on an oligotrophic Eastern Mediterranean coccolithophore community. Coccolithophore cell abundance drastically decreased under OW and combined OA and OW (greenhouse, GH) conditions. Emiliania huxleyi calcite mass decreased consistently only in the GH treatment; moreover, anomalous calcifications (i.e. coccolith malformations) were particularly common in the perturbed treatments, especially under OA. Overall, these data suggest that the projected increase in sea surface temperatures, including marine heatwaves, will cause rapid changes in Eastern Mediterranean coccolithophore communities, and that these effects will be exacerbated by OA. In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2021-05-11.

Acoustic estimates of herring and blue whiting abundance were obtained during the surveys using the Simrad ER60 scientific echosounder. The allocation of NASC-values to herring, blue whiting and other acoustic targets were based on the composition of the trawl catches and the appearance of echo recordings. To estimate the abundance, the allocated NASC -values were averaged for ICES-squares (0.5° latitude by 1° longitude). For each statistical square, the unit area density of fish (rA) in number per square nautical mile (N*nm-2) was calculated using standard equations (Foote et al., 1987; Toresen et al., 1998). To estimate the total abundance of fish, the unit area abundance for each statistical square was multiplied by the number of square nautical miles in each statistical square and then summed for all the statistical squares within defined subareas and over the total area. Biomass estimation was calculated by multiplying abundance in numbers by the average weight of the fish in each statistical square then summing all squares within defined subareas and over the total area. The Norwegian BEAM soft-ware (Totland and Godø 2001) was used to make estimates of total biomass. The research leading to these results received (partial/full) funding from the European Commission FP7 EURO-BASIN (European Basin-Scale Anal ysis, Synthesis, and Integration; Grant Agreement 264 933).