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Heat stress is a global issue constraining pig productivity, and it is likely to intensify under future climate change. Technological advances in earth observation have made tools available that enable identification and mapping livestock species that are at risk of exposure to heat stress due to climate change. Here, we present a methodology to map the current and likely future heat stress risk in pigs using R software by combining the effects of temperature and relative humidity. We applied the method to growing-finishing pigs in Uganda. We mapped monthly heat stress risk and quantified the number of pigs exposed to heat stress using 18 global circulation models and projected impacts in the 2050s. Results show that more than 800 000 pigs in Uganda will be affected by heat stress in the future. The results can feed into evidence-based policy, planning and targeted resource allocation in the livestock sector.

The implementation of agroecology principles within organic farming research is a crux to redesign sustainable agri-food systems. To govern this transition, the local research demand should be addressed by direct engagement of all stakeholders in the research process. The first step is the involvement of farmers and technicians, with the aim of restoring their decision-making role, switching governance to local scale. The co-design/co-management of Long-Term Experiments (LTEs) can be crucial to govern the above-described transition through networking and participatory activities. In this study, we report the experience of co-designing a new LTE in Southern Italy by local actors and scientists. Through a participatory action research methodology, an LTE was considered as a biophysical component of an agroecological living lab, a public–private environment aimed to design a local food system. The setup of parallel field trials in satellite farms stands for the other biophysical component, whereas the stakeholder platform represents the social one. Through definition of common objectives, a step-by-step process is presented, which highlights the interest of local organic actors to share ideas and perspectives for the territory, pointing out the inclusion of end-users (the consumers) in the process to complete the transition to sustainable food systems.

The lignocellulosic C4 perennial crop miscanthus and, more particularly, one of its species, Miscanthus × giganteus, are especially interesting for bioenergy production because they combine high biomass production with a low environmental impact. However, few varieties are available, which is risky due to disease susceptibility. Gathering worldwide references, this review shows a high genotypic and environmental variability for traits of interest related to miscanthus biomass production and composition, which may be useful in breeding programs for enhancing the availability of suitable clones for bioenergy production. The M. × giganteus species and certain clones in the Miscanthus sinensis species seem particularly interesting due to high biomass production per hectare. Although the industrial requirements for biomass composition have not been fully defined for the different bioenergy conversion processes, the M. × giganteus and Miscanthus sacchariflorus species, which show high lignin contents, appear more suitable for thermochemical conversion processes. In contrast, the M. sinensis species and certain M. × giganteus clones with low lignin contents were interesting for biochemical conversion processes. The M. sacchariflorus species is also interesting as a progenitor for breeding programs, due to its low ash content, which is suitable for the different bioenergy conversion processes. Moreover, mature miscanthus crops harvested in winter seem preferred by industry to enhance efficiency and reduce the expense of the processes. This investigation on miscanthus can be extrapolated to other monocotyledons and perennial crops, which may be proposed as feedstocks in addition to miscanthus.

Sugar beet (Beta vulgaris ssp. vulgaris) is an important crop of temperate climates which provides nearly 30% of the world's annual sugar production and is a source for bioethanol and animal feed. The species belongs to the order of Caryophylalles, is diploid with 2n = 18 chromosomes, has an estimated genome size of 714-758 megabases and shares an ancient genome triplication with other eudicot plants. Leafy beets have been cultivated since Roman times, but sugar beet is one of the most recently domesticated crops. It arose in the late eighteenth century when lines accumulating sugar in the storage root were selected from crosses made with chard and fodder beet. Here we present a reference genome sequence for sugar beet as the first non-rosid, non-asterid eudicot genome, advancing comparative genomics and phylogenetic reconstructions. The genome sequence comprises 567 megabases, of which 85% could be assigned to chromosomes. The assembly covers a large proportion of the repetitive sequence content that was estimated to be 63%. We predicted 27,421 protein-coding genes supported by transcript data and annotated them on the basis of sequence homology. Phylogenetic analyses provided evidence for the separation of Caryophyllales before the split of asterids and rosids, and revealed lineage-specific gene family expansions and losses. We sequenced spinach (Spinacia oleracea), another Caryophyllales species, and validated features that separate this clade from rosids and asterids. Intraspecific genomic variation was analysed based on the genome sequences of sea beet (Beta vulgaris ssp. maritima; progenitor of all beet crops) and four additional sugar beet accessions. We identified seven million variant positions in the reference genome, and also large regions of low variability, indicating artificial selection. The sugar beet genome sequence enables the identification of genes affecting agronomically relevant traits, supports molecular breeding and maximizes the plant's potential in energy biotechnology.

Judged by their negative nutrient balances, low soil cover and low productivity, the predominant agro-pastoral farming systems in the Sudano-Sahelian zone of West Africa are highly unsustainable for crop production intensification. With kaolinite as the main clay type, the cation exchange capacity of the soils in this region, often less than 1 cmolc kg−1soil, depends heavily on the organic carbon (Corg) content. However, due to low carbon sequestration and to the microbe, termite and temperature-induced rapid turnover rates of organic material in the present land-use systems, Corg contents of the topsoil are very low, ranging between 1 and 8 g kg-1 in most soils. For sustainable food production, the availability of phosphorus (P) and nitrogen (N) has to be increased considerably in combination with an improvement in soil physical properties. Therefore, the adoption of innovative management options that help to stop or even reverse the decline in Corg typically observed after cultivating bush or rangeland is of utmost importance. To maintain food production for a rapidly growing population, targeted applications of mineral fertilisers and the effective recycling of organic amendments as crop residues and manure are essential. Any increase in soil cover has large effects in reducing topsoil erosion by wind and water and favours the accumulation of wind-blown dust high in bases which in turn improves P availability. In the future decision support systems, based on GIS, modelling and simulation should be used to combine (i) available fertiliser response data from on-station and on-farm research, (ii) results on soil productivity restoration with the application of mineral and organic amendments and (iii) our present understanding of the cause-effect relationships governing the prevailing soil degradation processes. This will help to predict the effectiveness of regionally differentiated soil fertility management approaches to maintain or even increase soil Corg levels.

Short-rotation coppice (SRC) Salix plantations have the potential to provide fast-growing biomass feedstock with significant soil and climate mitigation benefits. Salix varieties exhibit significant variation in their physiological traits, growth patterns and soil ecology—but the effects of these variations have rarely been studied from a systems perspective. This study analyses the influence of variety on soil organic carbon (SOC) dynamics and climate impacts from Salix cultivation for heat production for a Swedish site with specific conditions. Soil carbon modelling was combined with a life cycle assessment (LCA) approach to quantify SOC sequestration and climate impacts over a 50-year period. The analysis used data from a Swedish field trial of six Salix varieties grown under fertilized and unfertilized treatments on Vertic Cambisols during 2001–2018. The Salix systems were compared with a reference case where heat is produced from natural gas and green fallow was the land use alternative. Climate impacts were determined using time-dependent LCA methodology—on a land-use (per hectare) and delivered energy unit (per MJheat) basis. All Salix varieties and treatments increased SOC, but the magnitude depended on the variety. Fertilization led to lower carbon sequestration than the equivalent unfertilized case. There was no clear relationship between biomass yield and SOC increase. In comparison with reference cases, all Salix varieties had significant potential for climate change mitigation. From a land-use perspective, high yield was the most important determining factor, followed by SOC sequestration, therefore high-yielding fertilized varieties such as ‘Tordis’, ‘Tora’ and ‘Björn’ performed best. On an energy-delivered basis, SOC sequestration potential was the determining factor for the climate change mitigation effect, with unfertilized ‘Jorr’ and ‘Loden’ outperforming the other varieties. These results show that Salix variety has a strong influence on SOC sequestration potential, biomass yield, growth pattern, response to fertilization and, ultimately, climate impact.