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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Barreaux, Antoine; Higginson, Andrew; Bonsall, Michael; English, Sinead;

    Here, we investigate how stochasticity and age-dependence in energy dynamics influence maternal allocation in iteroparous females. We develop a state-dependent model to calculate the optimal maternal allocation strategy with respect to maternal age and energy reserves, focusing on allocation in a single offspring at a time. We introduce stochasticity in energetic costs– in terms of the amount of energy required to forage successfully and individual differences in metabolism – and in feeding success. We systematically assess how allocation is influenced by age-dependence in energetic costs, feeding success, energy intake per successful feeding attempt, and environmentally-driven mortality. First, using stochastic dynamic programming, we calculate the optimal amount of reserves M that mothers allocate to each offspring depending on their own reserves R and age A. The optimal life history strategy is then the set of allocation decisions M(R, A) over the whole lifespan which maximizes the total reproductive success of distant descendants. Second, we simulated the life histories of 1000 mothers following the optimisation strategy and the reserves at the start of adulthood R1, the distribution of which was determined, the distribution of which was determined using an iterative procedure as described . For each individual, we calculated maternal allocation Mt, maternal reserves Rt, and relative allocation Mt⁄Rt at each time period t. The relative allocation helps us to understand how resources are partitioned between mother and offspring. Third, we consider how the optimal strategy varies when there is age-dependence in resource acquisition, energetic costs and survival. Specifically, we include varying scenarios with an age-dependent increase or a decrease with age in energetic costs (c_t), feeding success (q_t), energy intake per successful feeding attempt (y_t), and environmentally-driven extrinsic mortality rate (d_t) (Table 2). We consider the age-dependence of parameters one at a time or in pairs, altering the slope, intercept, or asymptote of the age-dependence (linear or asymptotic function). Our aim is to identify whether the observed reproductive senescence can arise from optimal maternal allocation. As such, we do not impose a decline in selection in later life as all offspring are equally valuable at all ages (for a given maternal allocation), and there are no mutations. For each scenario, we run the backward iteration process with these age-dependent functions, obtain the allocation strategy, and simulate the life history of 1000 individuals based on the novel strategy. We then fit quadratic and linear models to the reproduction of these 1000 individuals using the lme function, nlme package in R. For these models, the response variable is the maternal allocation Mt and explanatory variables are the time period t and t2 (for the quadratic fit only), with individual identity as a random term. We use likelihood ratio tests to compare linear and quadratic models using the anova function (package nlme) with the maximum-likelihood method. If the comparison is significant (p-value <0.05), we considered the quadratic model to have a better fit, otherwise the linear model is considered more parsimonious. We were particularly interested in identifying scenarios where the fit was quadratic with a negative quadratic term. For each scenario, the pseudo R2 conditional value (proportion of variance explained by the fixed and random terms, accounting for individual identity) is calculated to assess the goodness-of-fit of the lme model, on a scale from 0 to 1, using the “r.squared” function, package gabtool. All calculations and coding are done in R. Iteroparous parents face a trade-off between allocating current resources to reproduction versus maximizing survival to produce further offspring. Optimal allocation varies across age, and follows a hump-shaped pattern across diverse taxa, including mammals, birds and invertebrates. This non-linear allocation pattern lacks a general theoretical explanation, potentially because most studies focus on offspring number rather than quality and do not incorporate uncertainty or age-dependence in energy intake or costs. Here, we develop a life history model of maternal allocation in iteroparous animals. We identify the optimal allocation strategy in response to stochasticity when energetic costs, feeding success, energy intake, and environmentally-driven mortality risk are age-dependent. As a case study, we use tsetse, a viviparous insect that produces one offspring per reproductive attempt and relies on an uncertain food supply of vertebrate blood. Diverse scenarios generate a hump-shaped allocation: when energetic costs and energy intake increase with age; and also when energy intake decreases, and energetic costs increase or decrease. Feeding success and mortality risk have little influence on age-dependence in allocation. We conclude that ubiquitous evidence for age-dependence in these influential traits can explain the prevalence of non-linear maternal allocation across diverse taxonomic groups.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
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    ZENODO
    Dataset . 2022
    License: CC 0
    Data sources: ZENODO
    DRYAD
    Dataset . 2022
    License: CC 0
    Data sources: Datacite
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Dataset . 2022
      License: CC 0
      Data sources: ZENODO
      DRYAD
      Dataset . 2022
      License: CC 0
      Data sources: Datacite
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Shao, Junjiong; Zhou, Xuhui; van Groenigen, Kees; Zhou, Guiyao; +9 Authors

    Aim: Climate warming and biodiversity loss both alter plant productivity, yet we lack an understanding of how biodiversity regulates the responses of ecosystems to warming. In this study, we examine how plant diversity regulates the responses of grassland productivity to experimental warming using meta-analytic techniques. Location: Global Major taxa studied: Grassland ecosystems Methods: Our meta-analysis is based on warming responses of 40 different plant communities obtained from 20 independent studies on grasslands across five continents. Results: Our results show that plant diversity and its responses to warming were the most important factors regulating the warming effects on plant productivity, among all the factors considered (plant diversity, climate and experimental settings). Specifically, warming increased plant productivity when plant diversity (indicated by effective number of species) in grasslands was lesser than 10, whereas warming decreased plant productivity when plant diversity was greater than 10. Moreover, the structural equation modelling showed that the magnitude of warming enhanced plant productivity by increasing the performance of dominant plant species in grasslands of diversity lesser than 10. The negative effects of warming on productivity in grasslands with plant diversity greater than 10 were partly explained by diversity-induced decline in plant dominance. Main Conclusions: Our findings suggest that the positive or negative effect of warming on grassland productivity depends on how biodiverse a grassland is. This could mainly owe to differences in how warming may affect plant dominance and subsequent shifts in interspecific interactions in grasslands of different plant diversity levels.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
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    ZENODO
    Dataset . 2023
    License: CC 0
    Data sources: ZENODO
    DRYAD
    Dataset . 2022
    License: CC 0
    Data sources: Datacite
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ ZENODOarrow_drop_down
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Dataset . 2023
      License: CC 0
      Data sources: ZENODO
      DRYAD
      Dataset . 2022
      License: CC 0
      Data sources: Datacite
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Zoe M. Harris; Yiannis Kountouris;

    The Intergovernmental Panel on Climate Change (IPCC) report that to limit warming to 1.5 °C, Bioenergy with Carbon Capture and Storage (BECCS) is required. Integrated assessment models (IAMS) predict that a land area between the size of Argentina and Australia is required for bioenergy crops, a 3–7 time increase in the current bioenergy planting area globally. The authors pose the question of whether vertical farming (VF) technology can enable BECCS deployment, either via land sparing or supply. VF involves indoor controlled environment cultivation, and can increase productivity per unit land area by 5–10 times. VF is predominantly being used to grow small, high value leafy greens with rapid growth cycles. Capital expenditure, operational expenditure, and sustainability are challenges in current VF industries, and will affect the ability to utilise this technology for other crops. The authors argue that, whilst challenging, VF could help reach wider climate goals. Application of VF for bioenergy crops could be a game changer in delivering BECCS technologies and may reduce the land footprint required as well as the subsequent associated negative environmental impacts. VF bioenergy could allow us to cultivate the future demand for bioenergy for BECCS on the same, or less, land area than is currently used globally.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Sustainabilityarrow_drop_down
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    Sustainability
    Article . 2020 . Peer-reviewed
    License: CC BY
    Data sources: Crossref
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    Sustainability
    Article
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    Data sources: UnpayWall
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    Sustainability
    Article . 2020
    Data sources: DOAJ
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Sustainabilityarrow_drop_down
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      Sustainability
      Article . 2020 . Peer-reviewed
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      Sustainability
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      Sustainability
      Article . 2020
      Data sources: DOAJ
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    Authors: Victoria Marin-Burgos; Joy S. Clancy;

    Background: The global palm oil market experienced a remarkable boom since the year 2000. Since palm oil can be used for biodiesel production, the global expansion of oil palm cultivation has been associated with the global biofuel boom. Biofuel policies—especially those adopted in the European Union (EU)—have been blamed for the socio-environmental impacts of oil palm expansion. We explore how the global biofuel boom interacts with national geographies and social-economic and political processes to produce country-specific trajectories of biofuel crops expansion. We analyse the expansion of oil palm cultivation in Colombia between 2000 and 2010 from a political ecology perspective. Methods: The analysis is based on a framework that positions expansion of commodity frontiers within the ‘space-of-flows’ and the ‘space-of-place’. Through this approach, we identify the markets and geographies that define the country-specific trajectories of expansion of oil palm in Colombia, and their connections with general patterns of land control. The empirical analysis is based on primary data collected during fieldwork, and on an extensive review of secondary data about the palm oil sector and the socio-environmental effects of oil palm expansion in the country. Results: The contemporary oil palm expansion in Colombia was not specifically influenced by the international biofuel market. Expansion was characterized by an increasing production of palm oil for biodiesel, to supply a policy-driven national biofuel market controlled by national palm oil producers. The evidence shows that this oil palm expansion proceeded through a variety of land control practices that constitute forms of ‘accumulation by dispossession’ and ‘assimilation’. These are embedded in contextual factors that include the agrarian history of Colombia, the armed conflict, and government policies. Conclusions: Our study shows that the ways in which expansion of biofuel crops unfold in each producing country depend not only on the global biofuel market. They are also shaped by the country-specific geographies and political economies. Therefore, research and policies on the global expansion of energy crops should account for the complex and interrelated factors that mediate the specific ways in which the global demand for biofuels creates biofuel crop booms at country level.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Energy, Sustainabili...arrow_drop_down
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    Energy, Sustainability and Society
    Article . 2017 . Peer-reviewed
    License: CC BY
    Data sources: Crossref
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    Energy, Sustainability and Society
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      Energy, Sustainability and Society
      Article . 2017 . Peer-reviewed
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    Authors: Michel H.M. Eppink; Giuseppe Olivieri; Jeroen H. de Vree; Maria J. Barbosa; +7 Authors

    Model projections show that production of high-value products from microalgae could be profitable nowadays and commodities will become profitable within 10 years.

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    Energy & Environmental Science
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    Wageningen Staff Publications
    Article . 2016
    License: CC BY
    Energy & Environmental Science
    Article . 2016 . Peer-reviewed
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      Energy & Environmental Science
      Article
      License: CC BY
      Data sources: UnpayWall
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      Wageningen Staff Publications
      Article . 2016
      License: CC BY
      Energy & Environmental Science
      Article . 2016 . Peer-reviewed
      Data sources: Crossref
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    Authors: Kok; Meijer; Zeist, van; Hilbers; +6 Authors

    Assessing ambitious nature conservation strategies in a below 2 degrees warmer and food-secure world – supplementary spatial data Authors: Marcel Kok, Johan Meijer, Willem-Jan van Zeist, Jelle Hilbers, Marco Immovilli, Jan Janse, Elke Stehfest, Michel Bakkenes, Andrzej Tabeau, Aafke Schipper, Rob Alkemade Point of contact: Marcel.Kok@pbl.nl Research paper summary: Global biodiversity is projected to further decline under a wide range of future socio-economic development pathways, even in sustainability-oriented scenarios. This raises the question how biodiversity can be put on a path to recovery, the core challenge for the CBD post-2020 global biodiversity framework. We designed two contrasting, ambitious global conservation strategies, ‘Half Earth’ (HE) and ‘Sharing the Planet’ (SP), and evaluated their ability to restore terrestrial and freshwater biodiversity and to provide nature’s contributions to people (NCP), while also limiting global warming below 2 degrees and ensuring food security. We applied the integrated assessment framework IMAGE with the GLOBIO biodiversity model, using the ‘Middle of the Road’ Shared Socio-economic Pathway (SSP2) with its projected human population growth as baseline. We found that both conservation strategies reduce the global loss of biodiversity and NCP, but are insufficient to restore biodiversity. The HE strategy performs generally better for terrestrial biodiversity (biodiversity intactness (MSA), Area of Habitat Index, Living Planet Index, Red List Index) in currently still natural regions. The SP strategy yields more improvements for biodiversity in human-used areas, aquatic biodiversity and for regulating NCP (pest control, pollination, erosion control, water quality). However, the ‘conservation only’ scenarios show a considerable increase in food security risks and further global temperature increase, compared to the baseline. To restore biodiversity, it is necessary to combine conservation strategies with a portfolio of ‘integrated sustainability measures’ including climate change mitigation actions to change the energy and food systems, where minimizing food wastes and reducing consumption of animal products are crucial. The combination of conservation strategies and additional sustainability measures will restore biodiversity an NCP while keeping global warming below two degrees and food security risks below the baseline projection. Contents: This repository contains the supplementary spatial data describing the specific prioritization of conservation areas under the Half Earth (HE) and Sharing the Planet (SP) scenarios, and the resulting scenario land use and MSA data sets for the year 2050, including also a baseline (BL) scenario. All spatial data is in geotiff format at a 10 arcsecond resolution in WGS84 coordinate system. Detailed description of the methodology is provided in the paper listed under "related identifiers". Keywords: Nature conservation, Half Earth, Sharing the Planet, Climate Change, Food Security, Solution-oriented scenarios, Biodiversity, Nature’s Contribution to People, NCP This repository contains the supplementary spatial data describing the specific prioritization of conservation areas under the Half Earth (HE) and Sharing the Planet (SP) scenarios, and the resulting scenario land use and MSA data sets for the year 2050, including also a baseline (BL) scenario. All spatial data is in geotiff format at a 10 arcsecond resolution in WGS84 coordinate system. Detailed description of the methodology is provided in the paper listed under "related identifiers".

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    ZENODO
    Dataset . 2023
    License: CC BY
    Data sources: Datacite
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    ZENODO
    Dataset . 2023
    License: CC BY
    Data sources: ZENODO
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    ZENODO
    Dataset . 2023
    License: CC BY
    Data sources: Datacite
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    ZENODO
    Dataset . 2023
    License: CC BY
    Data sources: ZENODO
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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    Research@WUR
    Dataset . 2022
    Data sources: Research@WUR
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      ZENODO
      Dataset . 2023
      License: CC BY
      Data sources: Datacite
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      ZENODO
      Dataset . 2023
      License: CC BY
      Data sources: ZENODO
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      ZENODO
      Dataset . 2023
      License: CC BY
      Data sources: Datacite
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      ZENODO
      Dataset . 2023
      License: CC BY
      Data sources: ZENODO
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      Research@WUR
      Dataset . 2022
      Data sources: Research@WUR
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    Authors: Jansen, Merel; Anten, Niels P.R.; Bongers, Frans; Martínez-Ramos, Miguel; +2 Authors

    1. Natural populations deliver a wide range of products that provide income for millions of people and need to be exploited sustainably. Large heterogeneity in individual performance within these exploited populations has the potential to improve population recovery after exploitation and thus help sustaining yields over time. 2. We explored the potential of using individual heterogeneity to design smarter harvest schemes, by sparing individuals that contribute most to future productivity and population growth, using the understorey palm Chamaedorea elegans as a model system. Leaves of this palm are an important non-timber forest product and long-term inter-individual growth variability can be evaluated from internode lengths. 3. We studied a population of 830 individuals, half of which was subjected to a 67 % defoliation treatment for three years. We measured effects of defoliation on vital rates and leaf size – a trait that determines marketability. We constructed integral projection models in which vital rates depended on stem length, past growth rate, and defoliation, and evaluated transient population dynamics to quantify population development and leaf yield. We then simulated scenarios in which we spared individuals that were either most important for population growth or had leaves smaller than marketable size. 4. Individuals varying in size or past growth rate responded similarly to leaf harvesting in terms of growth and reproduction. By contrast, defoliation-induced reduction in survival chance was smaller in large individuals than in small ones. Simulations showed that harvest-induced population decline was much reduced when individuals from size and past growth classes that contributed most to population growth were spared. Under this scenario cumulative leaf harvest over 20 years was somewhat reduced, but long-term leaf production was sustained. A three-fold increase in leaf yield was generated when individuals with small leaves are spared. 5. Synthesis and applications This study demonstrates the potential to create smarter systems of palm leaf harvest by accounting for individual heterogeneity within exploited populations. Sparing individuals that contribute most to population growth ensured sustained leaf production over time. The concepts and methods presented here are generally applicable to exploited plant and animal species which exhibit considerable individual heterogeneity. Vital rate and internode dataThis data file contains annual vital rate data (stem length growth, fruit production, survival and leaf production) of 830 individuals of the understorey palm Chamaedorea elegans, collected in a 0.7 ha plot in Chiapas, Mexico, during the period November 2012 - November 2015. A 2/3 defoliation treatment was repeatedly applied to half of the individuals. The data file also contains measurements of the lengths of all internodes of all individuals.

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    ZENODO
    Dataset . 2018
    License: CC 0
    Data sources: ZENODO
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Research@WUR
    Dataset . 2018
    Data sources: Research@WUR
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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    B2FIND
    Dataset . 2018
    Data sources: B2FIND
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    EASY
    Dataset . 2018
    Data sources: EASY
    DRYAD
    Dataset . 2018
    License: CC 0
    Data sources: Datacite
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      ZENODO
      Dataset . 2018
      License: CC 0
      Data sources: ZENODO
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      Research@WUR
      Dataset . 2018
      Data sources: Research@WUR
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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      B2FIND
      Dataset . 2018
      Data sources: B2FIND
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      EASY
      Dataset . 2018
      Data sources: EASY
      DRYAD
      Dataset . 2018
      License: CC 0
      Data sources: Datacite
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    Authors: Antonio Lupini; Maria Polsia Princi; Fabrizio Araniti; Anthony J. Miller; +2 Authors

    Urea is the most common nitrogen (N) fertilizer in agriculture, due to its cheaper price and high N content. Although the reciprocal influence between NO3- and NH4+ nutrition are well known, urea (U) interactions with these N-inorganic forms are poorly studied. Here, the responses of two tomato genotypes to ammonium nitrate (AN), U alone or in combination were investigated. Significant differences in root and shoot biomass between genotypes were observed. Under AN+U supply, Linosa showed higher biomass compared to UC82, exhibiting also higher values for many root architectural traits. Linosa showed higher Nitrogen Uptake (NUpE) and Utilization Efficiency (NUtE) compared to UC82, under AN+U nutrition. Interestingly, Linosa exhibited also a significantly higher DUR3 transcript abundance. These results underline the beneficial effect of AN+U nutrition, highlighting new molecular and physiological strategies for selecting crops that can be used for more sustainable agriculture. The data suggest that translocation and utilization (NUtE) might be a more important component of NUE than uptake (NUpE) in tomato. Genetic variation could be a source for useful NUE traits in tomato; further experiments are needed to dissect the NUtE components that confer a higher ability to utilize N in Linosa.

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    Journal of Plant Physiology
    Article . 2017 . Peer-reviewed
    License: Elsevier TDM
    Data sources: Crossref
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    Authors: van der Sande, M.T.; Arets, E.J.M.M.; Pena Claros, M.; Hoosbeek, M.R.; +3 Authors

    In this study, we test the effects of abiotic factors (light variation, caused by logging disturbance, and soil fertility) and biotic factors (species richness and functional trait composition) on biomass stocks (aboveground biomass, fine root biomass), SOM and productivity in a relatively monodominant Guyanese tropical rainforest. This forest grows on nutrient-poor soils and has few species that contribute most to total abundance. We therefore expected strong effects of soil fertility and species’ traits that determine resource acquisition and conservation, but not of diversity. We evaluated 6 years of data for 30 0.4-ha plots and tested hypotheses using structural equation models. Our results indicate that light availability (through disturbance) and soil fertility – especially P – strongly limit forest biomass productivity and stocks in this Guyanese forest. Low P availability may cause strong environmental filtering, which in turn results in a small set of dominant species. As a result, community trait composition but not species richness determines productivity and stocks of biomass and SOM in tropical forest on poor soils.

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    Research@WUR
    Dataset . 2017
    Data sources: Research@WUR
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    B2FIND
    Dataset . 2017
    Data sources: B2FIND
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    EASY
    Dataset . 2017
    License: CC 0
    Data sources: EASY
    EASY
    Dataset . 2017
    Data sources: Datacite
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      Research@WUR
      Dataset . 2017
      Data sources: Research@WUR
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      B2FIND
      Dataset . 2017
      Data sources: B2FIND
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      EASY
      Dataset . 2017
      License: CC 0
      Data sources: EASY
      EASY
      Dataset . 2017
      Data sources: Datacite
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Leybourne, Daniel J; Preedy, Katharine F; Valentine, Tracy A; Bos, Jorunn I B; +1 Authors

    1. Aphids are abundant in natural and managed vegetation, supporting a diverse community of organisms and causing damage to agricultural crops. Due to a changing climate, periods of drought are anticipated to increase, and the potential consequences of this for aphid-plant interactions are unclear. 2. Using a meta-analysis and synthesis approach, we aimed to advance understanding of how increased drought incidence will affect this ecologically and economically important insect group, and to characterise any potential underlying mechanisms. We used qualitative and quantitative synthesis techniques to determine whether drought stress has a negative, positive, or null effect on aphid fitness and examined these effects in relation to 1) aphid biology, 2) geographical region, 3) host plant biology. 3. Across all studies, aphid fitness is typically reduced under drought. Subgroup analysis detected no difference in relation to aphid biology, geographical region, or the aphid-plant combination, indicating the negative effect of drought on aphids is potentially universal. Furthermore, drought stress had a negative impact on plant vigour and increased plant concentrations of defensive chemicals, suggesting the observed response of aphids is associated with reduced plant vigour and increased chemical defence in drought-stressed plants. 4. We propose a conceptual model to predict drought effects on aphid fitness in relation to plant vigour and defence to stimulate further research. Please check the ReadMe for an explanation of the values included in the dataset. Please note that n/a values are included in the Global_Dataset tab for plant meta-analysis data (_Plant_Vigour, _Plant_Defence, and _Plant_Nutrition), these indicate studies that did not report these parameters. Data was collected and curated using standard systematic literature synthesis approaches. The effect size (Hedges' g) reported in the dataset was calculated from extracted means and standard deviations.

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    ZENODO
    Dataset . 2021
    License: CC 0
    Data sources: ZENODO
    DRYAD
    Dataset . 2021
    License: CC 0
    Data sources: Datacite
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      ZENODO
      Dataset . 2021
      License: CC 0
      Data sources: ZENODO
      DRYAD
      Dataset . 2021
      License: CC 0
      Data sources: Datacite
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Barreaux, Antoine; Higginson, Andrew; Bonsall, Michael; English, Sinead;

    Here, we investigate how stochasticity and age-dependence in energy dynamics influence maternal allocation in iteroparous females. We develop a state-dependent model to calculate the optimal maternal allocation strategy with respect to maternal age and energy reserves, focusing on allocation in a single offspring at a time. We introduce stochasticity in energetic costs– in terms of the amount of energy required to forage successfully and individual differences in metabolism – and in feeding success. We systematically assess how allocation is influenced by age-dependence in energetic costs, feeding success, energy intake per successful feeding attempt, and environmentally-driven mortality. First, using stochastic dynamic programming, we calculate the optimal amount of reserves M that mothers allocate to each offspring depending on their own reserves R and age A. The optimal life history strategy is then the set of allocation decisions M(R, A) over the whole lifespan which maximizes the total reproductive success of distant descendants. Second, we simulated the life histories of 1000 mothers following the optimisation strategy and the reserves at the start of adulthood R1, the distribution of which was determined, the distribution of which was determined using an iterative procedure as described . For each individual, we calculated maternal allocation Mt, maternal reserves Rt, and relative allocation Mt⁄Rt at each time period t. The relative allocation helps us to understand how resources are partitioned between mother and offspring. Third, we consider how the optimal strategy varies when there is age-dependence in resource acquisition, energetic costs and survival. Specifically, we include varying scenarios with an age-dependent increase or a decrease with age in energetic costs (c_t), feeding success (q_t), energy intake per successful feeding attempt (y_t), and environmentally-driven extrinsic mortality rate (d_t) (Table 2). We consider the age-dependence of parameters one at a time or in pairs, altering the slope, intercept, or asymptote of the age-dependence (linear or asymptotic function). Our aim is to identify whether the observed reproductive senescence can arise from optimal maternal allocation. As such, we do not impose a decline in selection in later life as all offspring are equally valuable at all ages (for a given maternal allocation), and there are no mutations. For each scenario, we run the backward iteration process with these age-dependent functions, obtain the allocation strategy, and simulate the life history of 1000 individuals based on the novel strategy. We then fit quadratic and linear models to the reproduction of these 1000 individuals using the lme function, nlme package in R. For these models, the response variable is the maternal allocation Mt and explanatory variables are the time period t and t2 (for the quadratic fit only), with individual identity as a random term. We use likelihood ratio tests to compare linear and quadratic models using the anova function (package nlme) with the maximum-likelihood method. If the comparison is significant (p-value <0.05), we considered the quadratic model to have a better fit, otherwise the linear model is considered more parsimonious. We were particularly interested in identifying scenarios where the fit was quadratic with a negative quadratic term. For each scenario, the pseudo R2 conditional value (proportion of variance explained by the fixed and random terms, accounting for individual identity) is calculated to assess the goodness-of-fit of the lme model, on a scale from 0 to 1, using the “r.squared” function, package gabtool. All calculations and coding are done in R. Iteroparous parents face a trade-off between allocating current resources to reproduction versus maximizing survival to produce further offspring. Optimal allocation varies across age, and follows a hump-shaped pattern across diverse taxa, including mammals, birds and invertebrates. This non-linear allocation pattern lacks a general theoretical explanation, potentially because most studies focus on offspring number rather than quality and do not incorporate uncertainty or age-dependence in energy intake or costs. Here, we develop a life history model of maternal allocation in iteroparous animals. We identify the optimal allocation strategy in response to stochasticity when energetic costs, feeding success, energy intake, and environmentally-driven mortality risk are age-dependent. As a case study, we use tsetse, a viviparous insect that produces one offspring per reproductive attempt and relies on an uncertain food supply of vertebrate blood. Diverse scenarios generate a hump-shaped allocation: when energetic costs and energy intake increase with age; and also when energy intake decreases, and energetic costs increase or decrease. Feeding success and mortality risk have little influence on age-dependence in allocation. We conclude that ubiquitous evidence for age-dependence in these influential traits can explain the prevalence of non-linear maternal allocation across diverse taxonomic groups.

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    ZENODO
    Dataset . 2022
    License: CC 0
    Data sources: ZENODO
    DRYAD
    Dataset . 2022
    License: CC 0
    Data sources: Datacite
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Dataset . 2022
      License: CC 0
      Data sources: ZENODO
      DRYAD
      Dataset . 2022
      License: CC 0
      Data sources: Datacite
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Shao, Junjiong; Zhou, Xuhui; van Groenigen, Kees; Zhou, Guiyao; +9 Authors

    Aim: Climate warming and biodiversity loss both alter plant productivity, yet we lack an understanding of how biodiversity regulates the responses of ecosystems to warming. In this study, we examine how plant diversity regulates the responses of grassland productivity to experimental warming using meta-analytic techniques. Location: Global Major taxa studied: Grassland ecosystems Methods: Our meta-analysis is based on warming responses of 40 different plant communities obtained from 20 independent studies on grasslands across five continents. Results: Our results show that plant diversity and its responses to warming were the most important factors regulating the warming effects on plant productivity, among all the factors considered (plant diversity, climate and experimental settings). Specifically, warming increased plant productivity when plant diversity (indicated by effective number of species) in grasslands was lesser than 10, whereas warming decreased plant productivity when plant diversity was greater than 10. Moreover, the structural equation modelling showed that the magnitude of warming enhanced plant productivity by increasing the performance of dominant plant species in grasslands of diversity lesser than 10. The negative effects of warming on productivity in grasslands with plant diversity greater than 10 were partly explained by diversity-induced decline in plant dominance. Main Conclusions: Our findings suggest that the positive or negative effect of warming on grassland productivity depends on how biodiverse a grassland is. This could mainly owe to differences in how warming may affect plant dominance and subsequent shifts in interspecific interactions in grasslands of different plant diversity levels.

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    ZENODO
    Dataset . 2023
    License: CC 0
    Data sources: ZENODO
    DRYAD
    Dataset . 2022
    License: CC 0
    Data sources: Datacite
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      ZENODO
      Dataset . 2023
      License: CC 0
      Data sources: ZENODO
      DRYAD
      Dataset . 2022
      License: CC 0
      Data sources: Datacite
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Zoe M. Harris; Yiannis Kountouris;

    The Intergovernmental Panel on Climate Change (IPCC) report that to limit warming to 1.5 °C, Bioenergy with Carbon Capture and Storage (BECCS) is required. Integrated assessment models (IAMS) predict that a land area between the size of Argentina and Australia is required for bioenergy crops, a 3–7 time increase in the current bioenergy planting area globally. The authors pose the question of whether vertical farming (VF) technology can enable BECCS deployment, either via land sparing or supply. VF involves indoor controlled environment cultivation, and can increase productivity per unit land area by 5–10 times. VF is predominantly being used to grow small, high value leafy greens with rapid growth cycles. Capital expenditure, operational expenditure, and sustainability are challenges in current VF industries, and will affect the ability to utilise this technology for other crops. The authors argue that, whilst challenging, VF could help reach wider climate goals. Application of VF for bioenergy crops could be a game changer in delivering BECCS technologies and may reduce the land footprint required as well as the subsequent associated negative environmental impacts. VF bioenergy could allow us to cultivate the future demand for bioenergy for BECCS on the same, or less, land area than is currently used globally.

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    Sustainability
    Article . 2020 . Peer-reviewed
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    Data sources: Crossref
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    Article . 2020
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    Authors: Victoria Marin-Burgos; Joy S. Clancy;

    Background: The global palm oil market experienced a remarkable boom since the year 2000. Since palm oil can be used for biodiesel production, the global expansion of oil palm cultivation has been associated with the global biofuel boom. Biofuel policies—especially those adopted in the European Union (EU)—have been blamed for the socio-environmental impacts of oil palm expansion. We explore how the global biofuel boom interacts with national geographies and social-economic and political processes to produce country-specific trajectories of biofuel crops expansion. We analyse the expansion of oil palm cultivation in Colombia between 2000 and 2010 from a political ecology perspective. Methods: The analysis is based on a framework that positions expansion of commodity frontiers within the ‘space-of-flows’ and the ‘space-of-place’. Through this approach, we identify the markets and geographies that define the country-specific trajectories of expansion of oil palm in Colombia, and their connections with general patterns of land control. The empirical analysis is based on primary data collected during fieldwork, and on an extensive review of secondary data about the palm oil sector and the socio-environmental effects of oil palm expansion in the country. Results: The contemporary oil palm expansion in Colombia was not specifically influenced by the international biofuel market. Expansion was characterized by an increasing production of palm oil for biodiesel, to supply a policy-driven national biofuel market controlled by national palm oil producers. The evidence shows that this oil palm expansion proceeded through a variety of land control practices that constitute forms of ‘accumulation by dispossession’ and ‘assimilation’. These are embedded in contextual factors that include the agrarian history of Colombia, the armed conflict, and government policies. Conclusions: Our study shows that the ways in which expansion of biofuel crops unfold in each producing country depend not only on the global biofuel market. They are also shaped by the country-specific geographies and political economies. Therefore, research and policies on the global expansion of energy crops should account for the complex and interrelated factors that mediate the specific ways in which the global demand for biofuels creates biofuel crop booms at country level.

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    Energy, Sustainability and Society
    Article . 2017 . Peer-reviewed
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    Energy, Sustainability and Society
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      Energy, Sustainability and Society
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    Authors: Michel H.M. Eppink; Giuseppe Olivieri; Jeroen H. de Vree; Maria J. Barbosa; +7 Authors

    Model projections show that production of high-value products from microalgae could be profitable nowadays and commodities will become profitable within 10 years.

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    Energy & Environmental Science
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    Wageningen Staff Publications
    Article . 2016
    License: CC BY
    Energy & Environmental Science
    Article . 2016 . Peer-reviewed
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    Authors: Kok; Meijer; Zeist, van; Hilbers; +6 Authors

    Assessing ambitious nature conservation strategies in a below 2 degrees warmer and food-secure world – supplementary spatial data Authors: Marcel Kok, Johan Meijer, Willem-Jan van Zeist, Jelle Hilbers, Marco Immovilli, Jan Janse, Elke Stehfest, Michel Bakkenes, Andrzej Tabeau, Aafke Schipper, Rob Alkemade Point of contact: Marcel.Kok@pbl.nl Research paper summary: Global biodiversity is projected to further decline under a wide range of future socio-economic development pathways, even in sustainability-oriented scenarios. This raises the question how biodiversity can be put on a path to recovery, the core challenge for the CBD post-2020 global biodiversity framework. We designed two contrasting, ambitious global conservation strategies, ‘Half Earth’ (HE) and ‘Sharing the Planet’ (SP), and evaluated their ability to restore terrestrial and freshwater biodiversity and to provide nature’s contributions to people (NCP), while also limiting global warming below 2 degrees and ensuring food security. We applied the integrated assessment framework IMAGE with the GLOBIO biodiversity model, using the ‘Middle of the Road’ Shared Socio-economic Pathway (SSP2) with its projected human population growth as baseline. We found that both conservation strategies reduce the global loss of biodiversity and NCP, but are insufficient to restore biodiversity. The HE strategy performs generally better for terrestrial biodiversity (biodiversity intactness (MSA), Area of Habitat Index, Living Planet Index, Red List Index) in currently still natural regions. The SP strategy yields more improvements for biodiversity in human-used areas, aquatic biodiversity and for regulating NCP (pest control, pollination, erosion control, water quality). However, the ‘conservation only’ scenarios show a considerable increase in food security risks and further global temperature increase, compared to the baseline. To restore biodiversity, it is necessary to combine conservation strategies with a portfolio of ‘integrated sustainability measures’ including climate change mitigation actions to change the energy and food systems, where minimizing food wastes and reducing consumption of animal products are crucial. The combination of conservation strategies and additional sustainability measures will restore biodiversity an NCP while keeping global warming below two degrees and food security risks below the baseline projection. Contents: This repository contains the supplementary spatial data describing the specific prioritization of conservation areas under the Half Earth (HE) and Sharing the Planet (SP) scenarios, and the resulting scenario land use and MSA data sets for the year 2050, including also a baseline (BL) scenario. All spatial data is in geotiff format at a 10 arcsecond resolution in WGS84 coordinate system. Detailed description of the methodology is provided in the paper listed under "related identifiers". Keywords: Nature conservation, Half Earth, Sharing the Planet, Climate Change, Food Security, Solution-oriented scenarios, Biodiversity, Nature’s Contribution to People, NCP This repository contains the supplementary spatial data describing the specific prioritization of conservation areas under the Half Earth (HE) and Sharing the Planet (SP) scenarios, and the resulting scenario land use and MSA data sets for the year 2050, including also a baseline (BL) scenario. All spatial data is in geotiff format at a 10 arcsecond resolution in WGS84 coordinate system. Detailed description of the methodology is provided in the paper listed under "related identifiers".

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    Dataset . 2023
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    Data sources: Datacite
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    Research@WUR
    Dataset . 2022
    Data sources: Research@WUR
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      Research@WUR
      Dataset . 2022
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    Authors: Jansen, Merel; Anten, Niels P.R.; Bongers, Frans; Martínez-Ramos, Miguel; +2 Authors

    1. Natural populations deliver a wide range of products that provide income for millions of people and need to be exploited sustainably. Large heterogeneity in individual performance within these exploited populations has the potential to improve population recovery after exploitation and thus help sustaining yields over time. 2. We explored the potential of using individual heterogeneity to design smarter harvest schemes, by sparing individuals that contribute most to future productivity and population growth, using the understorey palm Chamaedorea elegans as a model system. Leaves of this palm are an important non-timber forest product and long-term inter-individual growth variability can be evaluated from internode lengths. 3. We studied a population of 830 individuals, half of which was subjected to a 67 % defoliation treatment for three years. We measured effects of defoliation on vital rates and leaf size – a trait that determines marketability. We constructed integral projection models in which vital rates depended on stem length, past growth rate, and defoliation, and evaluated transient population dynamics to quantify population development and leaf yield. We then simulated scenarios in which we spared individuals that were either most important for population growth or had leaves smaller than marketable size. 4. Individuals varying in size or past growth rate responded similarly to leaf harvesting in terms of growth and reproduction. By contrast, defoliation-induced reduction in survival chance was smaller in large individuals than in small ones. Simulations showed that harvest-induced population decline was much reduced when individuals from size and past growth classes that contributed most to population growth were spared. Under this scenario cumulative leaf harvest over 20 years was somewhat reduced, but long-term leaf production was sustained. A three-fold increase in leaf yield was generated when individuals with small leaves are spared. 5. Synthesis and applications This study demonstrates the potential to create smarter systems of palm leaf harvest by accounting for individual heterogeneity within exploited populations. Sparing individuals that contribute most to population growth ensured sustained leaf production over time. The concepts and methods presented here are generally applicable to exploited plant and animal species which exhibit considerable individual heterogeneity. Vital rate and internode dataThis data file contains annual vital rate data (stem length growth, fruit production, survival and leaf production) of 830 individuals of the understorey palm Chamaedorea elegans, collected in a 0.7 ha plot in Chiapas, Mexico, during the period November 2012 - November 2015. A 2/3 defoliation treatment was repeatedly applied to half of the individuals. The data file also contains measurements of the lengths of all internodes of all individuals.

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    ZENODO
    Dataset . 2018
    License: CC 0
    Data sources: ZENODO
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    Research@WUR
    Dataset . 2018
    Data sources: Research@WUR
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    B2FIND
    Dataset . 2018
    Data sources: B2FIND
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    EASY
    Dataset . 2018
    Data sources: EASY
    DRYAD
    Dataset . 2018
    License: CC 0
    Data sources: Datacite
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      ZENODO
      Dataset . 2018
      License: CC 0
      Data sources: ZENODO
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      Research@WUR
      Dataset . 2018
      Data sources: Research@WUR
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      B2FIND
      Dataset . 2018
      Data sources: B2FIND
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      EASY
      Dataset . 2018
      Data sources: EASY
      DRYAD
      Dataset . 2018
      License: CC 0
      Data sources: Datacite
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    Authors: Antonio Lupini; Maria Polsia Princi; Fabrizio Araniti; Anthony J. Miller; +2 Authors

    Urea is the most common nitrogen (N) fertilizer in agriculture, due to its cheaper price and high N content. Although the reciprocal influence between NO3- and NH4+ nutrition are well known, urea (U) interactions with these N-inorganic forms are poorly studied. Here, the responses of two tomato genotypes to ammonium nitrate (AN), U alone or in combination were investigated. Significant differences in root and shoot biomass between genotypes were observed. Under AN+U supply, Linosa showed higher biomass compared to UC82, exhibiting also higher values for many root architectural traits. Linosa showed higher Nitrogen Uptake (NUpE) and Utilization Efficiency (NUtE) compared to UC82, under AN+U nutrition. Interestingly, Linosa exhibited also a significantly higher DUR3 transcript abundance. These results underline the beneficial effect of AN+U nutrition, highlighting new molecular and physiological strategies for selecting crops that can be used for more sustainable agriculture. The data suggest that translocation and utilization (NUtE) might be a more important component of NUE than uptake (NUpE) in tomato. Genetic variation could be a source for useful NUE traits in tomato; further experiments are needed to dissect the NUtE components that confer a higher ability to utilize N in Linosa.

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    Journal of Plant Physiology
    Article . 2017 . Peer-reviewed
    License: Elsevier TDM
    Data sources: Crossref
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    Authors: van der Sande, M.T.; Arets, E.J.M.M.; Pena Claros, M.; Hoosbeek, M.R.; +3 Authors

    In this study, we test the effects of abiotic factors (light variation, caused by logging disturbance, and soil fertility) and biotic factors (species richness and functional trait composition) on biomass stocks (aboveground biomass, fine root biomass), SOM and productivity in a relatively monodominant Guyanese tropical rainforest. This forest grows on nutrient-poor soils and has few species that contribute most to total abundance. We therefore expected strong effects of soil fertility and species’ traits that determine resource acquisition and conservation, but not of diversity. We evaluated 6 years of data for 30 0.4-ha plots and tested hypotheses using structural equation models. Our results indicate that light availability (through disturbance) and soil fertility – especially P – strongly limit forest biomass productivity and stocks in this Guyanese forest. Low P availability may cause strong environmental filtering, which in turn results in a small set of dominant species. As a result, community trait composition but not species richness determines productivity and stocks of biomass and SOM in tropical forest on poor soils.

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    Research@WUR
    Dataset . 2017
    Data sources: Research@WUR
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    B2FIND
    Dataset . 2017
    Data sources: B2FIND
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    EASY
    Dataset . 2017
    License: CC 0
    Data sources: EASY
    EASY
    Dataset . 2017
    Data sources: Datacite
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      Research@WUR
      Dataset . 2017
      Data sources: Research@WUR
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      B2FIND
      Dataset . 2017
      Data sources: B2FIND
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      EASY
      Dataset . 2017
      License: CC 0
      Data sources: EASY
      EASY
      Dataset . 2017
      Data sources: Datacite
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    Authors: Leybourne, Daniel J; Preedy, Katharine F; Valentine, Tracy A; Bos, Jorunn I B; +1 Authors

    1. Aphids are abundant in natural and managed vegetation, supporting a diverse community of organisms and causing damage to agricultural crops. Due to a changing climate, periods of drought are anticipated to increase, and the potential consequences of this for aphid-plant interactions are unclear. 2. Using a meta-analysis and synthesis approach, we aimed to advance understanding of how increased drought incidence will affect this ecologically and economically important insect group, and to characterise any potential underlying mechanisms. We used qualitative and quantitative synthesis techniques to determine whether drought stress has a negative, positive, or null effect on aphid fitness and examined these effects in relation to 1) aphid biology, 2) geographical region, 3) host plant biology. 3. Across all studies, aphid fitness is typically reduced under drought. Subgroup analysis detected no difference in relation to aphid biology, geographical region, or the aphid-plant combination, indicating the negative effect of drought on aphids is potentially universal. Furthermore, drought stress had a negative impact on plant vigour and increased plant concentrations of defensive chemicals, suggesting the observed response of aphids is associated with reduced plant vigour and increased chemical defence in drought-stressed plants. 4. We propose a conceptual model to predict drought effects on aphid fitness in relation to plant vigour and defence to stimulate further research. Please check the ReadMe for an explanation of the values included in the dataset. Please note that n/a values are included in the Global_Dataset tab for plant meta-analysis data (_Plant_Vigour, _Plant_Defence, and _Plant_Nutrition), these indicate studies that did not report these parameters. Data was collected and curated using standard systematic literature synthesis approaches. The effect size (Hedges' g) reported in the dataset was calculated from extracted means and standard deviations.

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    ZENODO
    Dataset . 2021
    License: CC 0
    Data sources: ZENODO
    DRYAD
    Dataset . 2021
    License: CC 0
    Data sources: Datacite
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      ZENODO
      Dataset . 2021
      License: CC 0
      Data sources: ZENODO
      DRYAD
      Dataset . 2021
      License: CC 0
      Data sources: Datacite
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