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Digital Annex for the following thesis: Vila-Viçosa, C. (2023). Natural History, Biogeography and Evolution of the Iberian white oak syngameon (Quercus L. Sect. Quercus). Ph.D. Thesis, Faculdade de Ciências da Universidade do Porto, Portugal Abstract: The genus Quercus L. is one of the most diverse and important group of woody plants, particularly when considering that they are the trees that rule the Northern Hemisphere forests. Oaks have an intricate Biogeography that criss-crosses diverse climatic and edaphic gradients, encompassing a huge ambiguity in terms of species delimitation. Frequently, the taxonomic proposals brought by traditional Linnaean Botany are either insufficient or rather inflate the number of species and nomenclatural assignments, which are further diluted into inconsistent taxonomic ranks, varying from species to subspecies and varieties. The supremacy given to morphological characters that are inherently fragile and plastic, spread across the distribution areas of distinct lineages, may carry ambiguity on the identification and proper species delimitation. From the oaks that are distributed across the Western Palearctic region, the ones that are deciduous or brevi-deciduous present higher levels of ambiguity in terms of species number and their delimitation. This ambiguity is particularly strong in the circummediterranean region and in the transitional areas between the two major biogeographic Regions of the western Palearctic region, the Euro-Siberian and Mediterranean. This degree of uncertainty, which increases towards the Southern European Peninsulas, is amplified by the ease that the different species of oaks tend to hybridize among them. The present work provides a holistic framework that covers multiple areas, from the taxonomic and evolutive study of this genus, to biogeography and molecular characterization. Its major objective was to resolve the species delimitation of the Iberian deciduous and marcescent oaks and putative introgression among them, enhancing the available knowledge about species diversity, which can foster suitable species and forest conservation. A specific objective was to cross-reference the natural history revision and the different taxonomic treatments brought by distinct authors, with personal observations. These data were then incorporated into ecological modelling and molecular characterization, which in the end fed a newly updated taxonomic proposal. In Section A we obtained results from extensive field, herbaria, and literature review, updating the nomenclature of the Portuguese and western Mediterranean oaks. Section B was supported by Section A’s in-depth review and enabled finer species distribution models, nurturing both hindcast (since ca. 20 Kyr) and forecast (2070-2100) exercises of the range dynamics of Mediterranean oaks species. The study of past and future range shifts solved important pending biogeographic questions, especially related to past range-shifts. Such past-range shifts improved our knowledge on species responses to climate dynamics and allowed a better anticipation of future responses of range shifts driven by climate change. Section C encompassed the molecular characterization of Iberian white oak species and their hybrids, whose delimitation is often faltering when one intends to infer about species rank, or hypothesize about the participation of parent taxon in natural hybrid swarms. This work allowed us to solve the phylogenetic backbone of western Palearctic white oaks, suggesting a significant segregation of the Iberian pedunculate oaks and unveiling two subsections inside Section Quercus. These subsections are biogeographically well-segregated and present diverse levels of introgression among species. Results demonstrated the efficiency of RADSeq for rebuilding the reticulate phylogeny of the Eurasian white oaks, showcasing the significance of the Iberian Peninsula as a major hotspot for oak diversity. We implemented a circular approach to these methods, which retro-fed themselves in terms of insight generation, enabling a powerful strategy to solve the evolutionary history of this difficult groups of plants. We estimate that the reticulate historical biogeography of the western Palearctic white oaks deserves further scrutiny by adding vicariant oak populations from northern Africa, the Near East and southern European Peninsulas. Methods should again follow this similar additive and sequential process of adjoining deep Natural History examination, with extensive fieldwork in type populations and genome-wide molecular surveys, in order to solve this group of plants. With the present work, we were able to significantly improve on the depiction of the basic unit of Biodiversity (the Species), in the complex Quercus genus. We provided tools to enable further efforts for the conservation of the Mediterranean oak forests, which overwhelm one of the most important (and one of the most threatened) Biomes for plant conservation at the global scale.

High energy consumption is a challenging issue that an ever increasing number of mobile applications face today.However, energy consumption is being tested in an ad hoc way, despite being an important non-functional requirement of an application.Such limitation becomes particularly disconcerting during software testing: on the one hand, developers do not really know how to measure energy; on the other hand, there is no knowledge as to what is the energy overhead imposed by the testing framework.In this paper, as we evaluate eight popular mobile UI automation frameworks, we have discovered that there are automation frameworks that increase energy consumption up to roughly 2200%.While limited in the interactions one can do, Espresso is the most energy efficient framework.However, depending on the needs of the tester, Appium, Monkeyrunner, or UIAutomator are good alternatives.In practice, results show that deciding which is the most suitable framework is vital. We provide a decision tree to help developers make an educated decision on which framework suits best their testing needs.

The growing search for alternative energy sources is not only due to the present shortage of non-renewable energy sources, but also due to their negative environmental impacts. Therefore, a lot of attention is drawn to the use of biomass as a renewable energy source. However, using biomass in its natural state has not proven to be an efficient technique, giving rise to a wide range of processing treatments that enhance the properties of biomass as an energy source. Torrefaction is a thermal process that enhances the properties of biomass through its thermal decomposition at temperatures between 200 and 300 °C. The torrefaction process is defined by several parameters, which also have impacts on the final quality of the torrefied biomass. The final quality is measured by considering parameters, such as humidity, heating value (HV), and grindability. Studies have focused on maximizing the torrefied biomass’ quality using the best possible combination for the different parameters. The main objective of this article is to present new information regarding the conventional torrefaction process, as well as study the innovative techniques that have been in development for the improvement of the torrefied biomass qualities. With this study, conclusions were made regarding the importance of torrefaction in the energy field, after considering the economic status of this renewable resource. The importance of the torrefaction parameters on the final properties of torrefied biomass was also highly considered, as well as the importance of the reactor scales for the definition of ideal protocols.

Local development is a subject that arouses significant interest in the international scientific community in general, and in the Ibero-American one, in particular. The process of globalization has transformed the management of local development, altering the role that is played by local and regional entities, and it is the object of an important follow-up and analysis by academia. This research uses a bibliometric methodology and a fractional counting method, reviewing the 738 articles from the Scopus database in order to understand the state of Ibero-American research on local development, and analyze the scientific literature on the topic. The results show a significant increase in the number of publications in the 21st century, with Spain and Brazil leading the way. In addition, this research provides interesting results regarding the most influential authors on this topic, the most relevant journals, and the most important institutions and funding organizations. There are several areas of knowledge involved since local development is a transversal field, such as Social Science, environment, business, economics, and agriculture. A deep analysis of authors’ keywords identified new trends, linking local development with tourism, education, geotourism, climate change, local sustainable development, social innovation, and creativity, which provides academia with potential new lines of research.

East Lisbon is being exposed to large-scale urban regeneration processes, where luxury residential projects and mixed-use spatial developments are already underway. Thus, it is a living laboratory for “smart”, “creative” and “green” projects, as well as related urban public space interventions. Braço de Prata is an urban space overlooked by developers, being surrounded by obsolete industrial buildings. Concerning the recent interest in international investments in brownfield regeneration and greenfield developments, it represents an attractive urban terrain as a post-industrial working-class neighbourhood, where “smart” and “green” suggest transforming space so that both new and old residents can live and work together and share public space regardless of analysis on their environmental recognitions. The aim of this paper is to present an empirical evaluation model that examines the possible impacts of environmental negligence through the reorganisation of the physical and social fabric. The analyses focus on dwellers’ moral understanding of their changing environment as site-specific domains to address the unique conditions that affect transiently defined presumptions about the collective needs. Taking an evaluative approach in the Braço de Prata case, this paper demonstrates the specific socio-ecological implications of urban inequality in post-industrial neighbourhoods that could be threatened by new decisions, both through urban planning approaches and instruments.

The connection between Earth’s global temperature and carbon dioxide (CO2) emissions is one of the highest challenges in climate change science since there is some controversy about the real impact of CO2 emissions on the increase of global temperature. This work contributes to the existing literature by analyzing the relationship between CO2 emissions and the Earth’s global temperature for 61 years, providing a recent review of the emerging literature as well. Through a statistical approach based on maximum entropy, this study supports the results of other techniques that identify a positive impact of CO2 in the increase of the Earth’s global temperature. Given the well-known difficulties in the measurement of global temperature and CO2 emissions with high precision, this statistical approach is particularly appealing around climate change science, as it allows the replication of the original time series with the subsequent construction of confidence intervals for the model parameters. To prevent future risks, besides the present urgent decrease of greenhouse gas emissions, it is necessary to stop using the planet and nature as if resources were infinite.

The aim of this paper is to investigate the threshold effect of foreign direct investment (FDI) on environmental degradation. In empirical analysis, FDI and environmental degradation are jointly determined under the given threshold variable and other exogenous variables. Using carbon dioxide (CO2) emissions per capita as a proxy for environmental degradation, the results show that increasing FDI worsens CO2 emissions after a threshold level of corruption has been reached. Our results demonstrate that increasing FDI will increase CO2 emissions when the degree of corruptibility is relatively high. The study suggests that further FDI and improved environmental quality are competing rather than compatible objectives in high-corruption countries and are compatible rather than competing objectives in low-corruption countries. Higher trade liberalization in low-corruption countries could contribute to negative environmental consequences because of the increased output or economic activity which results from increased trade. The robustness estimation confirms the evidence that pollution and economic development increase together up to a certain income level, after which the trend reverses.

Abstract Scenedesmus obliquus biomass was used as a feedstock for comparing the biological production of hydrogen by two different types of anaerobic cultures: a heat-treated mixed culture from a wastewater treatment plant and Clostridium butyricum DSM 10702. The influence of the incubation temperature and the carbon source composition were evaluated in order to select the best production profile according to the characteristics of the microalgal biomass. C. butyricum showed a clear preference for monomeric sugars and starch, the latter being the major storage compound in microalgae. The highest H 2 production reached by this strain from starch was 468 mL/g, whereas the mixed culture incubated at 37 °C (LE37) produced 241 mL/g. When the mixed culture was incubated at 58 °C (LE58), a significant increase in the H 2 production occurred when xylose and xylan were used as carbon and energy source. The highest H 2 yield reached by the LE37 culture or in co-culture with C. butyricum was 1.52 and 2.01 mol/mol of glucose equivalents, respectively. However, the ratio H 2 /CO 2 (v/v) of the biogas produced in both cases was always lower than the one produced by the pure strain. In kinetic assays, C. butyricum attained 153.9 mL H 2 /L h from S. obliquus biomass within the first 24 h of incubation, with a H 2 yield of 2.74 mol/mol of glucose equivalents. H 2 production was accompanied mainly by acetate and butyrate as co-products. In summary, C. butyricum demonstrated a clear supremacy for third generation bioH 2 production from S. obliquus biomass.