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  • Energy Research
  • 2016-2025
  • 14. Life underwater

  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Clarke, Harry; D'Olivo, Juan Pablo; Conde, Mario; Evans, Richard; +1 Authors

    Preliminary ages were assigned to sample datasets by assigning seasonal trace element ratios minima and maxima in datasets to warmest and coolest months in satellite SST records and then linearly interpolating in-between

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    B2FIND
    Dataset . 2019
    Data sources: B2FIND
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    PANGAEA
    Dataset . 2019
    License: CC BY
    Data sources: PANGAEA
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ PANGAEA - Data Publi...arrow_drop_down
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      B2FIND
      Dataset . 2019
      Data sources: B2FIND
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      PANGAEA
      Dataset . 2019
      License: CC BY
      Data sources: PANGAEA
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Mol, Wouter; Heusinkveld, Bert;

    This dataset contains measurements of downwelling short wave irradiance, measured in a small scale grid setup at Falkenberg: 20 sensors in 4 by 5 grid with a 50 meter grid spacing. Another 4 sensors were placed in all direction about 5 km away from the main grid at Falkenberg. The sampling rate is 10 Hz, to catch all irradiance variability, and is calibrated against a high quality sun tracker. The strength of this dataset is not the absolute accuracy, but rather the spatial measurements and ability to catch variability. Quality: Accuracy is estimated to be within 5% of a conventional pyranometer. Quality varies depending on weather type, but is best for high solar elevation angles (solar noon +/- 4 hours). Data is manually quality controlled, with detailed quality flags included in the dataset. Some anomalous data is not caught, in particular noisy data due to many insects on the sensor or small dirt from birds that reduces the signal slightly. These effects are much smaller than the driving weather patterns. The data is unsuitable for calculating radiation balances, but it is particularly useful for studying variability and patterns of solar irradiance on small scales. Funding: Dutch Research Council (NWO), Shedding Light On Cloud Shadows: VI.Vidi.192.068 Project: FESSTVaL (Field Experiment on submesoscale spatio-temporal variability in Lindenberg), a measurement campaign initiated by the Hans-Ertel-Center for Weather Research.

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    https://dx.doi.org/10.25592/uh...
    Dataset . 2022
    License: CC BY
    Data sources: Datacite
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    Research@WUR
    Dataset . 2022
    Data sources: Research@WUR
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    B2FIND
    Dataset . 2022
    Data sources: B2FIND
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      https://dx.doi.org/10.25592/uh...
      Dataset . 2022
      License: CC BY
      Data sources: Datacite
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      Research@WUR
      Dataset . 2022
      Data sources: Research@WUR
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      B2FIND
      Dataset . 2022
      Data sources: B2FIND
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/

    Supplementary file for "Genetic Diversity and Structure of Tropical Porites lutea Populations Highlight Their High Adaptive Potential to Environmental Changes in the South China Sea"Three Tables and three figures in it.

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    figshare
    Dataset . 2022
    License: CC BY
    Data sources: Datacite
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    figshare
    Dataset . 2022
    License: CC BY
    Data sources: Datacite
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    Smithsonian figshare
    Dataset . 2022
    License: CC BY
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      figshare
      Dataset . 2022
      License: CC BY
      Data sources: Datacite
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      figshare
      Dataset . 2022
      License: CC BY
      Data sources: Datacite
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      Smithsonian figshare
      Dataset . 2022
      License: CC BY
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    Authors: Timmerman, Charles-Andre; Giraldo, Carolina; Cresson, Pierre; Ernande, Bruno; +4 Authors

    This dataset gathers data used to determine the temporal variability of couplings between pelagic and benthic habitats for fish assemblages at five periods. Organic matter fluxes were assessed using stable isotopes analysis. Species relative biomass was considered to explore energy fluxes within the fish assemblage

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    https://dx.doi.org/10.17882/76...
    Dataset . 2020
    License: CC BY
    Data sources: Datacite
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    SEANOE
    Dataset . 2020
    License: CC BY
    Data sources: SEANOE
    B2FIND
    Dataset . 2020
    Data sources: B2FIND
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      https://dx.doi.org/10.17882/76...
      Dataset . 2020
      License: CC BY
      Data sources: Datacite
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      SEANOE
      Dataset . 2020
      License: CC BY
      Data sources: SEANOE
      B2FIND
      Dataset . 2020
      Data sources: B2FIND
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  • Authors: Alan, D Tennyson J; Andrew, Reeve Hart; McKinlay Bruce; Charles-André, Bost; +42 Authors

    Penguins (Sphenisciformes) are a highly diverse order of seabirds distributed widely across the Southern Hemisphere. They shared a common ancestor with Procellariiformes about 60 million years ago, and have subsequently transited from flying seabirds to flightless marine divers. Approximately 20 extant penguin species are recognized across six well-defined genera, ranging from the Galápagos Islands on the equator, to the oceanic temperate forests of New Zealand, the rocky coastlines of the sub-Antarctic islands, and the sea-ice around Antarctica. To inhabit such diverse and extreme environments, this speciose order has evolved many physiological and morphological adaptations. However, penguins are also highly sensitive to climate change, and most species are already declining or are predicted to decline under future climate change scenarios. Therefore, penguins are an exciting system for understanding the evolutionary processes of speciation, adaptation and demography. Genomic data are an emerging resource for addressing questions about such processes. Here we present 19 new high-coverage genomes that, together with two previously published genomes also available in GigaDB, encompass all extant penguin species. As such, this dataset provides a novel resource for understanding the evolutionary history within penguins, and between penguins and other avifauna. We believe that our dataset and project will be important for cultural heritage and the conservation of this iconic Southern Hemisphere species assemblage. Comparative and evolutionary genomic analyses are currently being carried out, and the consortium welcomes new members interested in contributing to this work. While this work is still underway we have published these 19 penguin genomes to provide early-release, while requesting researchers intending to use this data for similar cross-species comparisons to continue to follow the Fort Lauderdale and Toronto rules.

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    Authors: Bronselaer, Ben; Zanna, Laure;

    Data from "Heat and carbon coupling reveals ocean warming due to circulation changes" by Bronselaer & Zanna, 2020, Nature, https://doi.org/10.1038/s41586-020-2573-5 The files contain Linear Change in Ocean Heat Content (top 2000 m) relative to 1951 for observations and CMIP5 data, and the decomposition into added and redistributed (due to changes in ocean circulation).

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    ZENODO
    Dataset . 2020
    License: CC BY
    Data sources: Datacite
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    ZENODO
    Dataset . 2020
    License: CC BY
    Data sources: Datacite
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    ZENODO
    Dataset . 2020
    License: CC BY
    Data sources: ZENODO
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    downloaddownloads32
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      ZENODO
      Dataset . 2020
      License: CC BY
      Data sources: Datacite
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      ZENODO
      Dataset . 2020
      License: CC BY
      Data sources: Datacite
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      ZENODO
      Dataset . 2020
      License: CC BY
      Data sources: ZENODO
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  • Authors: Lettenmaier, Terry;

    Data files for the NWEI Azura grid-connected deployment at the 30-meter berth of the US Navys Wave Energy Test Site (WETS 30m Site) at the Kaneohe Marine Corps Base Hawaii (MCBH) on the windward (northeast) coast of the island of Oahu, HI. See general documentation describing specifics of the data files and formats in a separate submission.

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  • Authors: Center For International Earth Science Information Network-CIESIN-Columbia University;

    The Low Elevation Coastal Zone (LECZ) Urban-Rural Population and Land Area Estimates, Version 3 data set contains land areas with urban, quasi-urban, rural, and total populations (counts) within the LECZ for 234 countries and other recognized territories for the years 1990, 2000, and 2015. This data set updates initial estimates for the LECZ population by drawing on a newer collection of input data, and provides a range of estimates for at-risk population and land area. Constructing accurate estimates requires high-quality and methodologically consistent input data, and the LECZv3 evaluates multiple data sources for population totals, digital elevation model, and spatially-delimited urban classifications. Users can find the paper "Estimating Population and Urban Areas at Risk of Coastal Hazards, 1990-2015: How data choices matter" (MacManus, et al. 2021) in order to evaluate selected inputs for modeling Low Elevation Coastal Zones. According to the paper, the following are considered core data sets for the purposes of LECZv3 estimates: Multi-Error-Removed Improved-Terrain Digital Elevation Model (MERIT-DEM), Global Human Settlement (GHSL) Population Grid R2019 and Degree of Urbanization Settlement Model Grid R2019a v2, and the Gridded Population of the World, Version 4 (GPWv4), Revision 11. This data set is produced by the Columbia University Center for International Earth Science Information Network (CIESIN) and the City University of New York (CUNY) Institute for Demographic Research (CIDR).

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    Authors: Barret, Maialen; Thalasso, Frederic; Gandois, Laure; Cruz, Klara Martinez; +19 Authors

    Methane emissions from aquatic and terrestrial ecosystems play a crucial role in global warming, which is particularly affecting high-latitude ecosystems. As major contributors to methane emissions in natural environments, the microbial communities involved in methane production and oxidation deserve a special attention. Microbial diversity and activity are expected to be strongly affected by the already observed (and further predicted) temperature increase in high-latitude ecosystems, eventually resulting in disrupted feedback methane emissions. The METHANOBASE project has been designed to investigate the intricate relations between microbial diversity and methane emissions in Arctic, Subarctic and Subantarctic ecosystems, under natural (baseline) conditions and in response to simulated temperature increments. We report here a small subunit ribosomal RNA (16S rRNA) analysis of lake, peatland and mineral soil ecosystems.

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    Global Biodiversity Information Facility
    Dataset . 2022
    License: CC BY
    Data sources: Datacite
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      Global Biodiversity Information Facility
      Dataset . 2022
      License: CC BY
      Data sources: Datacite
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    Authors: Sareyka, Jörg; Huth, Elfi; Nejstgaard, Jens Christian; Peter, Kasprzak; +1 Authors

    We simulated an experimental summer storm in large-volume (~1200 m3, ~16m depth) enclosures in Lake Stechlin by mixing deeper water masses from the meta- and hypolimnion into the mixed layer (epilimnion). The mixing included the disturbance of a deep chlorophyll maximum (DCM) which was present at the same time of the experiment in Lake Stechlin and situated in the metalimnion of each enclosure during filling. Copepod and Cladocera biomass was monitored for 42 days after the experimental disturbance event (Utermöhl counting at 60x magnification and biomass calculation from length-dry mass relationships). Sampling was performed using a 90 µm mesh size Apstein-cone. Method: 90 µm mesh size Apstein-cone, Utermöhl counting at 60x, TSO image analysis program (KIO VIDMESS-2011, Version 2.60.50, including a TSO-KST1003832 camera, TSO - Thalheim-Spezial-Optik-Gerätebau, Pulsnitz, Germany), biomass calculations from length-dry mass relationships (Bottrell et al. 1976; Kasprzak 1983).Further Project information:Core Facility grant; Award: GE 1775/2-1

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    B2FIND
    Dataset . 2021
    Data sources: B2FIND
    PANGAEA
    Dataset . 2021
    Data sources: PANGAEA
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      B2FIND
      Dataset . 2021
      Data sources: B2FIND
      PANGAEA
      Dataset . 2021
      Data sources: PANGAEA
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    Authors: Clarke, Harry; D'Olivo, Juan Pablo; Conde, Mario; Evans, Richard; +1 Authors

    Preliminary ages were assigned to sample datasets by assigning seasonal trace element ratios minima and maxima in datasets to warmest and coolest months in satellite SST records and then linearly interpolating in-between

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    B2FIND
    Dataset . 2019
    Data sources: B2FIND
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    PANGAEA
    Dataset . 2019
    License: CC BY
    Data sources: PANGAEA
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      B2FIND
      Dataset . 2019
      Data sources: B2FIND
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      PANGAEA
      Dataset . 2019
      License: CC BY
      Data sources: PANGAEA
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    Authors: Mol, Wouter; Heusinkveld, Bert;

    This dataset contains measurements of downwelling short wave irradiance, measured in a small scale grid setup at Falkenberg: 20 sensors in 4 by 5 grid with a 50 meter grid spacing. Another 4 sensors were placed in all direction about 5 km away from the main grid at Falkenberg. The sampling rate is 10 Hz, to catch all irradiance variability, and is calibrated against a high quality sun tracker. The strength of this dataset is not the absolute accuracy, but rather the spatial measurements and ability to catch variability. Quality: Accuracy is estimated to be within 5% of a conventional pyranometer. Quality varies depending on weather type, but is best for high solar elevation angles (solar noon +/- 4 hours). Data is manually quality controlled, with detailed quality flags included in the dataset. Some anomalous data is not caught, in particular noisy data due to many insects on the sensor or small dirt from birds that reduces the signal slightly. These effects are much smaller than the driving weather patterns. The data is unsuitable for calculating radiation balances, but it is particularly useful for studying variability and patterns of solar irradiance on small scales. Funding: Dutch Research Council (NWO), Shedding Light On Cloud Shadows: VI.Vidi.192.068 Project: FESSTVaL (Field Experiment on submesoscale spatio-temporal variability in Lindenberg), a measurement campaign initiated by the Hans-Ertel-Center for Weather Research.

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    https://dx.doi.org/10.25592/uh...
    Dataset . 2022
    License: CC BY
    Data sources: Datacite
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    Research@WUR
    Dataset . 2022
    Data sources: Research@WUR
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    B2FIND
    Dataset . 2022
    Data sources: B2FIND
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      https://dx.doi.org/10.25592/uh...
      Dataset . 2022
      License: CC BY
      Data sources: Datacite
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      Research@WUR
      Dataset . 2022
      Data sources: Research@WUR
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      B2FIND
      Dataset . 2022
      Data sources: B2FIND
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    Supplementary file for "Genetic Diversity and Structure of Tropical Porites lutea Populations Highlight Their High Adaptive Potential to Environmental Changes in the South China Sea"Three Tables and three figures in it.

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    figshare
    Dataset . 2022
    License: CC BY
    Data sources: Datacite
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    figshare
    Dataset . 2022
    License: CC BY
    Data sources: Datacite
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    Smithsonian figshare
    Dataset . 2022
    License: CC BY
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      figshare
      Dataset . 2022
      License: CC BY
      Data sources: Datacite
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      figshare
      Dataset . 2022
      License: CC BY
      Data sources: Datacite
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      Smithsonian figshare
      Dataset . 2022
      License: CC BY
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    Authors: Timmerman, Charles-Andre; Giraldo, Carolina; Cresson, Pierre; Ernande, Bruno; +4 Authors

    This dataset gathers data used to determine the temporal variability of couplings between pelagic and benthic habitats for fish assemblages at five periods. Organic matter fluxes were assessed using stable isotopes analysis. Species relative biomass was considered to explore energy fluxes within the fish assemblage

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    https://dx.doi.org/10.17882/76...
    Dataset . 2020
    License: CC BY
    Data sources: Datacite
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    SEANOE
    Dataset . 2020
    License: CC BY
    Data sources: SEANOE
    B2FIND
    Dataset . 2020
    Data sources: B2FIND
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      https://dx.doi.org/10.17882/76...
      Dataset . 2020
      License: CC BY
      Data sources: Datacite
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      SEANOE
      Dataset . 2020
      License: CC BY
      Data sources: SEANOE
      B2FIND
      Dataset . 2020
      Data sources: B2FIND
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  • Authors: Alan, D Tennyson J; Andrew, Reeve Hart; McKinlay Bruce; Charles-André, Bost; +42 Authors

    Penguins (Sphenisciformes) are a highly diverse order of seabirds distributed widely across the Southern Hemisphere. They shared a common ancestor with Procellariiformes about 60 million years ago, and have subsequently transited from flying seabirds to flightless marine divers. Approximately 20 extant penguin species are recognized across six well-defined genera, ranging from the Galápagos Islands on the equator, to the oceanic temperate forests of New Zealand, the rocky coastlines of the sub-Antarctic islands, and the sea-ice around Antarctica. To inhabit such diverse and extreme environments, this speciose order has evolved many physiological and morphological adaptations. However, penguins are also highly sensitive to climate change, and most species are already declining or are predicted to decline under future climate change scenarios. Therefore, penguins are an exciting system for understanding the evolutionary processes of speciation, adaptation and demography. Genomic data are an emerging resource for addressing questions about such processes. Here we present 19 new high-coverage genomes that, together with two previously published genomes also available in GigaDB, encompass all extant penguin species. As such, this dataset provides a novel resource for understanding the evolutionary history within penguins, and between penguins and other avifauna. We believe that our dataset and project will be important for cultural heritage and the conservation of this iconic Southern Hemisphere species assemblage. Comparative and evolutionary genomic analyses are currently being carried out, and the consortium welcomes new members interested in contributing to this work. While this work is still underway we have published these 19 penguin genomes to provide early-release, while requesting researchers intending to use this data for similar cross-species comparisons to continue to follow the Fort Lauderdale and Toronto rules.

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    Authors: Bronselaer, Ben; Zanna, Laure;

    Data from "Heat and carbon coupling reveals ocean warming due to circulation changes" by Bronselaer & Zanna, 2020, Nature, https://doi.org/10.1038/s41586-020-2573-5 The files contain Linear Change in Ocean Heat Content (top 2000 m) relative to 1951 for observations and CMIP5 data, and the decomposition into added and redistributed (due to changes in ocean circulation).

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    ZENODO
    Dataset . 2020
    License: CC BY
    Data sources: Datacite
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    ZENODO
    Dataset . 2020
    License: CC BY
    Data sources: Datacite
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    ZENODO
    Dataset . 2020
    License: CC BY
    Data sources: ZENODO
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      ZENODO
      Dataset . 2020
      License: CC BY
      Data sources: Datacite
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      ZENODO
      Dataset . 2020
      License: CC BY
      Data sources: Datacite
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      ZENODO
      Dataset . 2020
      License: CC BY
      Data sources: ZENODO
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  • Authors: Lettenmaier, Terry;

    Data files for the NWEI Azura grid-connected deployment at the 30-meter berth of the US Navys Wave Energy Test Site (WETS 30m Site) at the Kaneohe Marine Corps Base Hawaii (MCBH) on the windward (northeast) coast of the island of Oahu, HI. See general documentation describing specifics of the data files and formats in a separate submission.

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  • Authors: Center For International Earth Science Information Network-CIESIN-Columbia University;

    The Low Elevation Coastal Zone (LECZ) Urban-Rural Population and Land Area Estimates, Version 3 data set contains land areas with urban, quasi-urban, rural, and total populations (counts) within the LECZ for 234 countries and other recognized territories for the years 1990, 2000, and 2015. This data set updates initial estimates for the LECZ population by drawing on a newer collection of input data, and provides a range of estimates for at-risk population and land area. Constructing accurate estimates requires high-quality and methodologically consistent input data, and the LECZv3 evaluates multiple data sources for population totals, digital elevation model, and spatially-delimited urban classifications. Users can find the paper "Estimating Population and Urban Areas at Risk of Coastal Hazards, 1990-2015: How data choices matter" (MacManus, et al. 2021) in order to evaluate selected inputs for modeling Low Elevation Coastal Zones. According to the paper, the following are considered core data sets for the purposes of LECZv3 estimates: Multi-Error-Removed Improved-Terrain Digital Elevation Model (MERIT-DEM), Global Human Settlement (GHSL) Population Grid R2019 and Degree of Urbanization Settlement Model Grid R2019a v2, and the Gridded Population of the World, Version 4 (GPWv4), Revision 11. This data set is produced by the Columbia University Center for International Earth Science Information Network (CIESIN) and the City University of New York (CUNY) Institute for Demographic Research (CIDR).

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    Authors: Barret, Maialen; Thalasso, Frederic; Gandois, Laure; Cruz, Klara Martinez; +19 Authors

    Methane emissions from aquatic and terrestrial ecosystems play a crucial role in global warming, which is particularly affecting high-latitude ecosystems. As major contributors to methane emissions in natural environments, the microbial communities involved in methane production and oxidation deserve a special attention. Microbial diversity and activity are expected to be strongly affected by the already observed (and further predicted) temperature increase in high-latitude ecosystems, eventually resulting in disrupted feedback methane emissions. The METHANOBASE project has been designed to investigate the intricate relations between microbial diversity and methane emissions in Arctic, Subarctic and Subantarctic ecosystems, under natural (baseline) conditions and in response to simulated temperature increments. We report here a small subunit ribosomal RNA (16S rRNA) analysis of lake, peatland and mineral soil ecosystems.

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    Global Biodiversity Information Facility
    Dataset . 2022
    License: CC BY
    Data sources: Datacite
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      Global Biodiversity Information Facility
      Dataset . 2022
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    Authors: Sareyka, Jörg; Huth, Elfi; Nejstgaard, Jens Christian; Peter, Kasprzak; +1 Authors

    We simulated an experimental summer storm in large-volume (~1200 m3, ~16m depth) enclosures in Lake Stechlin by mixing deeper water masses from the meta- and hypolimnion into the mixed layer (epilimnion). The mixing included the disturbance of a deep chlorophyll maximum (DCM) which was present at the same time of the experiment in Lake Stechlin and situated in the metalimnion of each enclosure during filling. Copepod and Cladocera biomass was monitored for 42 days after the experimental disturbance event (Utermöhl counting at 60x magnification and biomass calculation from length-dry mass relationships). Sampling was performed using a 90 µm mesh size Apstein-cone. Method: 90 µm mesh size Apstein-cone, Utermöhl counting at 60x, TSO image analysis program (KIO VIDMESS-2011, Version 2.60.50, including a TSO-KST1003832 camera, TSO - Thalheim-Spezial-Optik-Gerätebau, Pulsnitz, Germany), biomass calculations from length-dry mass relationships (Bottrell et al. 1976; Kasprzak 1983).Further Project information:Core Facility grant; Award: GE 1775/2-1

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    B2FIND
    Dataset . 2021
    Data sources: B2FIND
    PANGAEA
    Dataset . 2021
    Data sources: PANGAEA
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      B2FIND
      Dataset . 2021
      Data sources: B2FIND
      PANGAEA
      Dataset . 2021
      Data sources: PANGAEA
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