Climate change is exerting profound impacts on the structure and function of global boreal forest. Compared with their northern counterparts, trees growing at the southern boreal forest and the temperate-boreal forest ecotone likely show distinct responses to climate change. Based on annual basal areal increment (BAI) of Dahurian larch (Larix gmelinii Rupr.) plantations with similar ages, tree densities and soil nutrient conditions, we investigated the tree growth responses to inter-annual climate variations at an Asian temperate-boreal forest ecotone and nearby boreal sites in northeast China. Annual BAI changed nonlinearly with cambial age in the form of a lognormal curve. The maximum annual BAI showed no significant difference between the two bioregions, while annual BAI peaked at an elder age at the boreal-temperate forest ecotone. After eliminating the age associated trend, conditional regression analyses indicate that residual BAI at the boreal sites increased significantly with higher growing-season mean nighttime minimum temperature and non-growing-season precipitation, but decreased significantly with higher growing-season mean daytime maximum temperature during the past three decades (1985–2015). In contrast, residual BAI at the boreal-temperate forest ecotone only showed a positive and weak response to inter-annual variations of growing-season precipitation. These findings suggest distinct effects of inter-annual climate variation on the growth of boreal trees at the temperate-boreal forest ecotone in comparison to the southern boreal regions, and highlight future efforts to elucidate the key factors that regulate the growth ofthe southernmost boreal trees.