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Widespread Occurrence of Expressed Fungal Secretory Peroxidases in Forest Soils

Authors: Kellner Mail, Harald; Luis, Patricia; J. Pecyna, Marek; Barbi, Florian; Kapturska, Danuta; Krüger, Dirk; R. Zak, Donald; +3 Authors

Widespread Occurrence of Expressed Fungal Secretory Peroxidases in Forest Soils

Abstract

Fungal secretory peroxidases mediate fundamental ecological functions in the conversion and degradation of plant biomass. Many of these enzymes have strong oxidizing activities towards aromatic compounds and are involved in the degradation of plant cell wall (lignin) and humus. They comprise three major groups: class II peroxidases (including lignin peroxidase, manganese peroxidase, versatile peroxidase and generic peroxidase), dye-decolorizing peroxidases, and heme-thiolate peroxidases (e.g. unspecific/aromatic peroxygenase, chloroperoxidase). Here, we have repeatedly observed a widespread expression of all major peroxidase groups in leaf and needle litter across a range of forest ecosystems (e.g. Fagus, Picea, Acer, Quercus, and Populus spp.), which are widespread in Europe and North America. Manganese peroxidases and unspecific peroxygenases were found expressed in all nine investigated forest sites, and dye-decolorizing peroxidases were observed in five of the nine sites, thereby indicating biological significance of these enzymes for fungal physiology and ecosystem processes. Transcripts of selected secretory peroxidase genes were also analyzed in pure cultures of several litter-decomposing species and other fungi. Using this information, we were able to match, in environmental litter samples, two manganese peroxidase sequences to Mycena galopus and Mycena epipterygia and one unspecific peroxygenase transcript to Mycena galopus, suggesting an important role of this litter- and coarse woody debris-dwelling genus in the disintegration and transformation of litter aromatics and organic matter formation.

Country
France
Keywords

[SDV.SA]Life Sciences [q-bio]/Agricultural sciences, 570, Science, [SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Sequence Data, [SDV.BID]Life Sciences [q-bio]/Biodiversity, Forests, Fungal Proteins, [SDV.EE]Life Sciences [q-bio]/Ecology, [SDV.BBM] Life Sciences [q-bio]/Biochemistry, Molecular Biology, [SDV.BV]Life Sciences [q-bio]/Vegetal Biology, [SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology, [SDV.BV] Life Sciences [q-bio]/Vegetal Biology, Amino Acid Sequence, Molecular Biology, Phylogeny, Soil Microbiology, 580, [SDV.EE]Life Sciences [q-bio]/Ecology, environment, [SDV.EE] Life Sciences/Ecology, environment, [SDV.SA] Life Sciences [q-bio]/Agricultural sciences, Basidiomycota, Q, R, Sequence Analysis, DNA, [SDV.BBM] Life Sciences/Biochemistry, Molecular Biology, [SDV.TOX] Life Sciences/Toxicology, [SDV.TOX] Life Sciences [q-bio]/Toxicology, [SDV.EE] Life Sciences [q-bio]/Ecology, environment, Peroxidases, [SDV.TOX]Life Sciences [q-bio]/Toxicology, [SDV.BID] Life Sciences/Biodiversity, [SDV.SA] Life Sciences/Agricultural sciences, Medicine, [SDV.BV] Life Sciences/Vegetal Biology, environment, [SDV.BID] Life Sciences [q-bio]/Biodiversity, Research Article

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    citations
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    97
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 1%
    influence
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    Top 10%
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 10%
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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
97
Top 1%
Top 10%
Top 10%
Green
gold