<script type="text/javascript">
<!--
document.write('<div id="oa_widget"></div>');
document.write('<script type="text/javascript" src="https://beta.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=undefined&type=result"></script>');
-->
</script>

COPY SCRIPT

For further information contact us at helpdesk@openaire.eu

Pyrosequencing Reveals a Highly Diverse and Cultivar-Specific Bacterial Endophyte Community in Potato Roots

descriptionPublicationkeyboard_double_arrow_right Article , Journal 23 Apr 2010Publisher:Springer Science and Business Media LLCJournal:Microbial Ecology, volume 60, pages 157-166 (issn: 0095-3628, eissn: 1432-184X,

Authors: David G. Holm; Jorge A. Delgado; Rachel A. Stong; Daniel K. Manter;

doi: 10.1007/s00248-010-9658-x

pmid: 20414647

Pyrosequencing Reveals a Highly Diverse and Cultivar-Specific Bacterial Endophyte Community in Potato Roots

- Summary
- Subjects
- Metrics

Abstract

In this study, we examined the bacterial endophyte community of potato (Solanum tuberosum) cultivar/clones using two different molecular-based techniques (bacterial automated ribosomal intergenic spacer analysis (B-ARISA) and pyrosequencing). B-ARISA profiles revealed a significant difference in the endophytic community between cultivars (perMANOVA, p 0.600) or negative (r < -0.600) correlation with plant biomass, suggesting a possible link between plant production and endophyte abundance. This study represents one of the most comprehensive assessments of the bacterial endophytic communities to date, and similar analyses in other plant species, cultivars, or tissues could be utilized to further elucidate the potential contribution(s) of endophytic communities to plant physiology and production.

Related Organizations

Colorado State University
United States
Agricultural Research Service
United States
Agricultural Research Service
United States
United States Department of the Interior
United States

Keywords

DNA, Bacterial, Bacteria, Biodiversity, Sequence Analysis, DNA, Plant Roots, DNA, Ribosomal Spacer, Biomass, Soil Microbiology, Solanum tuberosum

Impact byBIP!

	citations This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	230
	popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.	Top 1%
	influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).	Top 10%
	impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.	Top 1%