In order to assess the impact of crustacean zooplankton on phytoplankton and protozoan ciliates in the Sahela reservoir under semi-arid climate, we conducted experiments during the period from July to December 1999 at the deepest point in the lake (15 m). Samplings and measurements were carried out in diffusion chambers submerged in situ over a period of 7 h without (control chambers) and with (experimental chambers) crustacean zooplankton. During these experiments, counts were conducted on phytoplankton and ciliates to determine the abundance and the mortality of these organisms due to zooplankton in each diffusion chambers at t = 0 and t = 7 h of incubation. The study showed that the growth rates of phytoplankton and ciliates populations varied between 0.02 and 0.05 h-1 and from 0.01 to 0.07 h-1, respectively. The mortality caused by zooplankton grazing fluctuated from 0.07 to 0.2 h-1 of phytoplankton and from 0.01 to 0.2 h-1 of ciliates. These mortalities were significantly and positively correlated with the growth rates (r = 0.8; p < 0.02; n = 9). Moreover, the heavy predation by the crustacean zooplankton was exerted on small-sized phytoplankton and ciliates and we demonstrated the relationships between protozoans and zooplankton for the transfer of matter and energy in aquatic food webs. Furthermore, the crustacean zooplankton metabolism was different, whether zooplankton was present in diffusion chambers or in the lake.